BLASTX nr result

ID: Bupleurum21_contig00020227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020227
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276426.1| PREDICTED: uncharacterized protein LOC100253...    62   5e-08
ref|XP_002512796.1| conserved hypothetical protein [Ricinus comm...    61   8e-08

>ref|XP_002276426.1| PREDICTED: uncharacterized protein LOC100253147 [Vitis vinifera]
           gi|147801393|emb|CAN74736.1| hypothetical protein
           VITISV_044236 [Vitis vinifera]
           gi|296082236|emb|CBI21241.3| unnamed protein product
           [Vitis vinifera]
          Length = 187

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
 Frame = -1

Query: 412 MKMKAAGFVKKILSII---GKAKSMADLKNRMRNIKTRFMIYSLLSTDKKVLFGSISHKL 242
           MK KA+ F+K+I+S+I    KAKS+A LK++   +KTR +++SLL  +KKVL  SISHKL
Sbjct: 1   MKNKASSFLKQIISVITTVAKAKSLA-LKSKTSALKTRLLVFSLLR-NKKVLMASISHKL 58

Query: 241 QGLIQEQTPSTANQEESTLSLQQLAPVLYNDM 146
             L+         Q+E T   Q  A V+YN M
Sbjct: 59  HALV--------GQQEKTEDDQSKAIVVYNAM 82


>ref|XP_002512796.1| conserved hypothetical protein [Ricinus communis]
           gi|223547807|gb|EEF49299.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 211

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
 Frame = -1

Query: 412 MKMKAAGFVKKI---LSIIGKAKSMADLKNRMRNIKTRFMIYSLLSTDKKVLFGSISHKL 242
           +K KA+ F+KKI   L+ + KAK++A LKN+   ++TR MI+SLL  DKK+L  +IS KL
Sbjct: 2   LKSKASKFLKKITLVLASMAKAKTLA-LKNKTNALRTRLMIFSLLR-DKKILMSTISQKL 59

Query: 241 QGLIQEQTPSTANQEESTLSL--QQLAPVLYNDMHATI 134
             L  +Q      QEE   S+  Q  A VLYN  H+T+
Sbjct: 60  HALAGQQEHDKQQQEEGEDSIEDQSKAIVLYN--HSTM 95


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