BLASTX nr result

ID: Bupleurum21_contig00020223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020223
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146528.1| PREDICTED: general transcription factor IIE ...   171   4e-41
ref|XP_002283557.1| PREDICTED: general transcription factor IIE ...   170   1e-40
ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40
ref|XP_002509755.1| Transcription initiation factor IIE subunit ...   163   2e-38
ref|XP_003532609.1| PREDICTED: general transcription factor IIE ...   160   8e-38

>ref|XP_004146528.1| PREDICTED: general transcription factor IIE subunit 2-like [Cucumis
           sativus] gi|449499921|ref|XP_004160955.1| PREDICTED:
           general transcription factor IIE subunit 2-like [Cucumis
           sativus]
          Length = 277

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/97 (83%), Positives = 92/97 (94%)
 Frame = +3

Query: 3   DLLLETRQAFTAEQINEACYVDVNANKIVFDSLKKNVKVNYDGRRFSYKSKHDVKDKSQL 182
           DLLLETRQAFT EQINEACYVD+N+NK V+DSL+ N KV+YDGRRFSYKSKHD+KDK+QL
Sbjct: 82  DLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKVHYDGRRFSYKSKHDLKDKNQL 141

Query: 183 LKLVRKFPEGIAVIDLKDAYPSVMDDLQALKAAGEIW 293
           L LVRKFPEGIAVIDLKDAYPSVM+DLQALKA+G++W
Sbjct: 142 LYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVW 178


>ref|XP_002283557.1| PREDICTED: general transcription factor IIE subunit 2 [Vitis
           vinifera] gi|297742556|emb|CBI34705.3| unnamed protein
           product [Vitis vinifera]
          Length = 285

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = +3

Query: 3   DLLLETRQAFTAEQINEACYVDVNANKIVFDSLKKNVKVNYDGRRFSYKSKHDVKDKSQL 182
           DLLLETRQAFT EQINEACYVD NANK VFDSL+ N KV+YDG+RF+YKSKHD+KD+SQL
Sbjct: 81  DLLLETRQAFTPEQINEACYVDTNANKAVFDSLRNNPKVSYDGKRFAYKSKHDLKDRSQL 140

Query: 183 LKLVRKFPEGIAVIDLKDAYPSVMDDLQALKAAGEIW 293
           L LVRKFPEGIAVIDLKD+YPSVM+DLQALKAAG++W
Sbjct: 141 LVLVRKFPEGIAVIDLKDSYPSVMEDLQALKAAGQVW 177


>ref|XP_002299546.1| predicted protein [Populus trichocarpa] gi|222846804|gb|EEE84351.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/97 (82%), Positives = 90/97 (92%)
 Frame = +3

Query: 3   DLLLETRQAFTAEQINEACYVDVNANKIVFDSLKKNVKVNYDGRRFSYKSKHDVKDKSQL 182
           DLLLETRQAFT EQIN+ CYVD+N+NK VFDSL+ N KV+YDG+RFSYKSKHD+KDKSQL
Sbjct: 85  DLLLETRQAFTPEQINDHCYVDMNSNKAVFDSLRNNPKVHYDGKRFSYKSKHDLKDKSQL 144

Query: 183 LKLVRKFPEGIAVIDLKDAYPSVMDDLQALKAAGEIW 293
           L L+RKFPEGIAVIDLKD+YPSVMDDLQALKA G+IW
Sbjct: 145 LVLIRKFPEGIAVIDLKDSYPSVMDDLQALKAVGQIW 181


>ref|XP_002509755.1| Transcription initiation factor IIE subunit beta, putative [Ricinus
           communis] gi|223549654|gb|EEF51142.1| Transcription
           initiation factor IIE subunit beta, putative [Ricinus
           communis]
          Length = 282

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/97 (81%), Positives = 87/97 (89%)
 Frame = +3

Query: 3   DLLLETRQAFTAEQINEACYVDVNANKIVFDSLKKNVKVNYDGRRFSYKSKHDVKDKSQL 182
           DLL ETRQAFT EQINEACYVDVN+NK VFDSL+ N KV+YDGR FSYKSKHD+KDK QL
Sbjct: 83  DLLFETRQAFTPEQINEACYVDVNSNKAVFDSLRNNPKVHYDGRHFSYKSKHDLKDKKQL 142

Query: 183 LKLVRKFPEGIAVIDLKDAYPSVMDDLQALKAAGEIW 293
           L L+R+F EGIAVIDLKDAYP+VM+DLQALKAAG IW
Sbjct: 143 LYLIREFKEGIAVIDLKDAYPTVMEDLQALKAAGGIW 179


>ref|XP_003532609.1| PREDICTED: general transcription factor IIE subunit 2-like [Glycine
           max]
          Length = 280

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/97 (77%), Positives = 91/97 (93%)
 Frame = +3

Query: 3   DLLLETRQAFTAEQINEACYVDVNANKIVFDSLKKNVKVNYDGRRFSYKSKHDVKDKSQL 182
           DLLLETRQAFT EQINEACYVD+ ANK VF++L+KN KVNYDG+R SYKSK+ +KDK++L
Sbjct: 80  DLLLETRQAFTPEQINEACYVDMKANKDVFENLRKNPKVNYDGQRLSYKSKYGIKDKTEL 139

Query: 183 LKLVRKFPEGIAVIDLKDAYPSVMDDLQALKAAGEIW 293
           L+LVRK+PEG+AVIDLKDAYP+VM+DLQA+KAAG+IW
Sbjct: 140 LQLVRKYPEGLAVIDLKDAYPTVMEDLQAMKAAGQIW 176


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