BLASTX nr result

ID: Bupleurum21_contig00020221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020221
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634609.1| PREDICTED: receptor-like protein 12-like [Vi...    62   6e-08
emb|CBI39345.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002264793.1| PREDICTED: receptor-like protein 12-like [Vi...    60   2e-07
ref|XP_002267388.2| PREDICTED: receptor-like protein 12-like [Vi...    59   3e-07
emb|CBI24197.3| unnamed protein product [Vitis vinifera]               56   3e-06

>ref|XP_003634609.1| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 814

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/85 (42%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = -1

Query: 259 SYSGNPGLCGFPLSKKCPGDIIEPQEEDEDAD-NFLSGFTWKAXXXXXXXXXXXXXXXXX 83
           SY+GN GLCGFPLSKKC  D  E  E  ++AD  F SGF WK                  
Sbjct: 719 SYNGNSGLCGFPLSKKCTTD--ETLEPSKEADAEFESGFDWKITLMGYGCGLVIGLSLGC 776

Query: 82  XXXMAGKPKWYVGIIARELGLKVKR 8
              + GKP+W+V II   L  K +R
Sbjct: 777 FIFLTGKPEWFVRIIEENLHNKSRR 801


>emb|CBI39345.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/85 (42%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = -1

Query: 259 SYSGNPGLCGFPLSKKCPGDIIEPQEEDEDAD-NFLSGFTWKAXXXXXXXXXXXXXXXXX 83
           SY+GN GLCGFPLSKKC  D  E  E  ++AD  F SGF WK                  
Sbjct: 521 SYNGNSGLCGFPLSKKCTTD--ETLEPSKEADAEFESGFDWKITLMGYGCGLVIGLSLGC 578

Query: 82  XXXMAGKPKWYVGIIARELGLKVKR 8
              + GKP+W+V II   L  K +R
Sbjct: 579 FIFLTGKPEWFVRIIEENLHNKSRR 603


>ref|XP_002264793.1| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 980

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/84 (38%), Positives = 42/84 (50%)
 Frame = -1

Query: 259  SYSGNPGLCGFPLSKKCPGDIIEPQEEDEDADNFLSGFTWKAXXXXXXXXXXXXXXXXXX 80
            SY+GN  LCGFPLSKKC  D      ++EDA+ F + F WK                   
Sbjct: 885  SYNGNSELCGFPLSKKCIADETPEPSKEEDAE-FENKFDWKFMLVGYGCGLVYGLSLGGI 943

Query: 79   XXMAGKPKWYVGIIARELGLKVKR 8
              + GKPKW+V II   +  K++R
Sbjct: 944  IFLIGKPKWFVSIIEENIHKKIRR 967


>ref|XP_002267388.2| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 1001

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/85 (40%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
 Frame = -1

Query: 259  SYSGNPGLCGFPLSKKCPGDIIEPQEEDEDAD-NFLSGFTWKAXXXXXXXXXXXXXXXXX 83
            SY+ N GLCGFPLSKKC  D  E  E  ++AD  F  GF WK                  
Sbjct: 906  SYNENSGLCGFPLSKKCIAD--ETPEPSKEADAKFDGGFDWKITLMGYGCGLVIGLSLGC 963

Query: 82   XXXMAGKPKWYVGIIARELGLKVKR 8
               + GKPKW+V II   +  K++R
Sbjct: 964  LVFLTGKPKWFVWIIEDNIHKKIRR 988


>emb|CBI24197.3| unnamed protein product [Vitis vinifera]
          Length = 149

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
 Frame = -1

Query: 259 SYSGNPGLCGFPLSKKCPGDII--EPQEEDEDADNFLSGFTWKAXXXXXXXXXXXXXXXX 86
           SYSGN GLCGFPLSKKC  D     P+EE+ ++D   +GF WK                 
Sbjct: 54  SYSGNIGLCGFPLSKKCVVDEAPQPPKEEEVESD---TGFDWKVILMGYGCGLVVGLSIG 110

Query: 85  XXXXMAGKPKWYVGIIARELGLKVKR 8
               +  KPKW+V +I  +   KV++
Sbjct: 111 CLVFLTRKPKWFVRMIEGDRHKKVRK 136


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