BLASTX nr result

ID: Bupleurum21_contig00020220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020220
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523237.1| PREDICTED: protein MKS1-like [Glycine max]        108   7e-22
ref|XP_003526855.1| PREDICTED: protein MKS1-like [Glycine max]        107   1e-21
ref|XP_003525114.1| PREDICTED: protein MKS1-like [Glycine max]         99   3e-19
gb|AFK43245.1| unknown [Medicago truncatula]                           99   6e-19
ref|XP_003532861.1| PREDICTED: protein MKS1-like [Glycine max]         99   6e-19

>ref|XP_003523237.1| PREDICTED: protein MKS1-like [Glycine max]
          Length = 212

 Score =  108 bits (269), Expect = 7e-22
 Identities = 68/158 (43%), Positives = 84/158 (53%), Gaps = 14/158 (8%)
 Frame = -3

Query: 436 MNPWDEFTGGQQPSPIKRHIQGPRPSPLKVNKESHXXXXXXXXXXXXXXXXXXXXXPS-- 263
           MNP +   GG  P   +  +QGPRP PLKV+K+SH                         
Sbjct: 1   MNPPEIPFGGAPPPKKEVQLQGPRPPPLKVSKDSHKIKKPPPHPAHHHHNHPHAPPEQNL 60

Query: 262 ETRQPVIIYAVSPKVIHTTENEFMGLVQRLTXXXXXXXXXGA-GDVSPAARIAAMEKTSP 86
           + R+PVIIY+VSPKVIH T  +FM +VQRLT            GDVSPAAR+A++EKTSP
Sbjct: 61  QQREPVIIYSVSPKVIHVTPGDFMDVVQRLTGASSGEYPPAGRGDVSPAARLASIEKTSP 120

Query: 85  SGRER-----------GMIDGFEVGHLPGILSPSPANL 5
           S RER            + +G EVG  PGIL+P P  L
Sbjct: 121 SERERVLHYKDDDIAWMLEEGVEVGQFPGILTPEPGTL 158


>ref|XP_003526855.1| PREDICTED: protein MKS1-like [Glycine max]
          Length = 222

 Score =  107 bits (267), Expect = 1e-21
 Identities = 71/162 (43%), Positives = 84/162 (51%), Gaps = 18/162 (11%)
 Frame = -3

Query: 436 MNPWDEFTGGQQPSPIKR-HIQGPRPSPLKVNKESHXXXXXXXXXXXXXXXXXXXXXPS- 263
           MNP  E   G  P P K   +QGPRP PLKV+KESH                        
Sbjct: 1   MNP-PEIPFGGAPLPKKELQLQGPRPPPLKVSKESHKIKKPPPHPAHHHHNYPHAPPDQN 59

Query: 262 --ETRQPVIIYAVSPKVIHTTENEFMGLVQRLTXXXXXXXXXGA-GDVSPAARIAAMEKT 92
             + R+PVIIY+VSPKVIH T  +FM +VQRLT            GDVSPAAR+A++EKT
Sbjct: 60  LQQQREPVIIYSVSPKVIHVTPGDFMDVVQRLTGASIGEEPPSGRGDVSPAARLASIEKT 119

Query: 91  SPSGRERGMI-------------DGFEVGHLPGILSPSPANL 5
           SPS RER  +             +G EVG  PGIL+P P  L
Sbjct: 120 SPSERERERVLHNIDDNIAWMLGEGVEVGQFPGILTPEPGTL 161


>ref|XP_003525114.1| PREDICTED: protein MKS1-like [Glycine max]
          Length = 208

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 65/154 (42%), Positives = 84/154 (54%), Gaps = 14/154 (9%)
 Frame = -3

Query: 436 MNP--WDEFTGGQQPSPIKRHIQ--GPRPSPLKVNKESHXXXXXXXXXXXXXXXXXXXXX 269
           MNP  +     G    P K+ +Q  G RP PL+V+K+SH                     
Sbjct: 1   MNPPEFPSAAAGTSSPPGKKELQLQGTRPPPLRVSKDSHKIRKPPLPPTAHQPAPPPPP- 59

Query: 268 PSETRQPVIIYAVSPKVIHTTENEFMGLVQRLT-XXXXXXXXXGAGDVSPAARIAAMEKT 92
             E R+PVIIY VSPKV+H T ++FM +VQRLT           AGDVSPAAR+A++E+T
Sbjct: 60  --EQRKPVIIYTVSPKVLHVTVSDFMNVVQRLTGPSSGAEPNLRAGDVSPAARLASIERT 117

Query: 91  SPSGRERG---------MIDGFEVGHLPGILSPS 17
           SPS RE+          M++G EVG  PGILSP+
Sbjct: 118 SPSEREKVRSEDNDVTLMLEGVEVGQFPGILSPA 151


>gb|AFK43245.1| unknown [Medicago truncatula]
          Length = 214

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 67/159 (42%), Positives = 88/159 (55%), Gaps = 15/159 (9%)
 Frame = -3

Query: 436 MNPWDEFTGG---QQPSPIKR-HIQGPRPSPLKVNKESHXXXXXXXXXXXXXXXXXXXXX 269
           MNP  EF  G     PSP +   IQG RP PL+V+KES                      
Sbjct: 1   MNP-PEFPSGVGTSTPSPRRELQIQGTRPPPLRVSKESRTIRKPPLPPAAAHHHQPAGA- 58

Query: 268 PSETRQPVIIYAVSPKVIHTTENEFMGLVQRLT-XXXXXXXXXGAGDVSPAARIAAMEKT 92
            S+ RQP+IIY+VSPKV+H   ++FM +VQRLT           +G VSPAAR+A++E+T
Sbjct: 59  -SQHRQPLIIYSVSPKVLHIPVSDFMDVVQRLTGPSAGEEAPQQSGAVSPAARLASIERT 117

Query: 91  SPSGRER----------GMIDGFEVGHLPGILSPSPANL 5
           SP+ RER           +++G E+G  PGILSP+PA L
Sbjct: 118 SPTERERIQQTVDEDLTWLLEGVEMGQFPGILSPAPATL 156


>ref|XP_003532861.1| PREDICTED: protein MKS1-like [Glycine max]
          Length = 198

 Score = 98.6 bits (244), Expect = 6e-19
 Identities = 65/154 (42%), Positives = 83/154 (53%), Gaps = 14/154 (9%)
 Frame = -3

Query: 436 MNPWDEFTGGQ-----QPSPIKRHIQGPRPSPLKVNKESHXXXXXXXXXXXXXXXXXXXX 272
           MNP  EF  G       P   +  +QG RP PL+V+K+SH                    
Sbjct: 1   MNP-PEFPSGSCGTSSPPGKKELQLQGTRPPPLRVSKDSHKIRKPPLPPTAHQPAALP-- 57

Query: 271 XPSETRQPVIIYAVSPKVIHTTENEFMGLVQRLTXXXXXXXXXGAGDVSPAARIAAMEKT 92
              E R+PVIIYAVSPKV+H    +FM +VQRLT          +GDVSPAAR+A++E+T
Sbjct: 58  ---EHRKPVIIYAVSPKVLHVPAGDFMNVVQRLT-------GPSSGDVSPAARLASIERT 107

Query: 91  SPSGRERG---------MIDGFEVGHLPGILSPS 17
           SPS RE+          M++G EVG  PGILSP+
Sbjct: 108 SPSEREKVHSEDNDVKLMLEGVEVGQFPGILSPA 141


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