BLASTX nr result

ID: Bupleurum21_contig00020217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020217
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...   218   1e-54
emb|CBI22162.3| unnamed protein product [Vitis vinifera]              218   1e-54
emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]   218   1e-54
ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...   209   5e-52
ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   208   1e-51

>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score =  218 bits (555), Expect = 1e-54
 Identities = 112/191 (58%), Positives = 137/191 (71%), Gaps = 2/191 (1%)
 Frame = -3

Query: 721 RLWDXXXXXXXXS-CCVGMTSLPGAPVGMKCHESLLFVAAGSSVAAIDLRTMKKVFGTPN 545
           R+WD        S CCVGMTS+ GAPV MKC+ESLLFVAAGSSV+ IDLRTM++V     
Sbjct: 275 RVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFVAAGSSVSTIDLRTMQRVITAAI 334

Query: 544 NQPRLYSFEMLPSKSIICTGGMNSAMLWDIRKVSESVE-APVSELDGHTGAVKFLHMDHH 368
            Q  +YSF++LPSKS+ICTGG   AMLWDIRK  E+++  PV E+DGHTG V  LHMD +
Sbjct: 335 GQHEVYSFDILPSKSLICTGGDGKAMLWDIRKSQETLKPEPVIEVDGHTGPVTLLHMDPY 394

Query: 367 KVVSGTSEDPYVRVWESDTGRLTNSLECSPIEGEYSNPGCSAMAVKGCQIATASFNETQG 188
           K+V+G  ED +V VWE DTG  TN+L CS  EG  SNPGCSAMA  GC+I TAS     G
Sbjct: 395 KIVTGGPEDDHVNVWELDTGTQTNTLACSSDEGPNSNPGCSAMAADGCRIVTASCGTEDG 454

Query: 187 VLRYRDFRNAS 155
           ++ +RDF +A+
Sbjct: 455 LVWFRDFTDAT 465


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  218 bits (555), Expect = 1e-54
 Identities = 112/191 (58%), Positives = 137/191 (71%), Gaps = 2/191 (1%)
 Frame = -3

Query: 721 RLWDXXXXXXXXS-CCVGMTSLPGAPVGMKCHESLLFVAAGSSVAAIDLRTMKKVFGTPN 545
           R+WD        S CCVGMTS+ GAPV MKC+ESLLFVAAGSSV+ IDLRTM++V     
Sbjct: 272 RVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFVAAGSSVSTIDLRTMQRVITAAI 331

Query: 544 NQPRLYSFEMLPSKSIICTGGMNSAMLWDIRKVSESVE-APVSELDGHTGAVKFLHMDHH 368
            Q  +YSF++LPSKS+ICTGG   AMLWDIRK  E+++  PV E+DGHTG V  LHMD +
Sbjct: 332 GQHEVYSFDILPSKSLICTGGDGKAMLWDIRKSQETLKPEPVIEVDGHTGPVTLLHMDPY 391

Query: 367 KVVSGTSEDPYVRVWESDTGRLTNSLECSPIEGEYSNPGCSAMAVKGCQIATASFNETQG 188
           K+V+G  ED +V VWE DTG  TN+L CS  EG  SNPGCSAMA  GC+I TAS     G
Sbjct: 392 KIVTGGPEDDHVNVWELDTGTQTNTLACSSDEGPNSNPGCSAMAADGCRIVTASCGTEDG 451

Query: 187 VLRYRDFRNAS 155
           ++ +RDF +A+
Sbjct: 452 LVWFRDFTDAT 462


>emb|CAN79923.1| hypothetical protein VITISV_042443 [Vitis vinifera]
          Length = 491

 Score =  218 bits (555), Expect = 1e-54
 Identities = 112/191 (58%), Positives = 137/191 (71%), Gaps = 2/191 (1%)
 Frame = -3

Query: 721 RLWDXXXXXXXXS-CCVGMTSLPGAPVGMKCHESLLFVAAGSSVAAIDLRTMKKVFGTPN 545
           R+WD        S CCVGMTS+ GAPV MKC+ESLLFVAAGSSV+ IDLRTM++V     
Sbjct: 272 RVWDTTTSSAVRSSCCVGMTSVLGAPVDMKCYESLLFVAAGSSVSTIDLRTMQRVITAAI 331

Query: 544 NQPRLYSFEMLPSKSIICTGGMNSAMLWDIRKVSESVE-APVSELDGHTGAVKFLHMDHH 368
            Q  +YSF++LPSKS+ICTGG   AMLWDIRK  E+++  PV E+DGHTG V  LHMD +
Sbjct: 332 GQHEVYSFDILPSKSLICTGGDGKAMLWDIRKSQETLKPEPVIEVDGHTGPVTLLHMDPY 391

Query: 367 KVVSGTSEDPYVRVWESDTGRLTNSLECSPIEGEYSNPGCSAMAVKGCQIATASFNETQG 188
           K+V+G  ED +V VWE DTG  TN+L CS  EG  SNPGCSAMA  GC+I TAS     G
Sbjct: 392 KIVTGGPEDDHVNVWELDTGTQTNTLACSSDEGPNSNPGCSAMAADGCRIVTASCGTEDG 451

Query: 187 VLRYRDFRNAS 155
           ++ +RDF +A+
Sbjct: 452 LVWFRDFTDAT 462


>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score =  209 bits (532), Expect = 5e-52
 Identities = 103/177 (58%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
 Frame = -3

Query: 682 CCVGMTSLPGAPVGMKCHESLLFVAAGSSVAAIDLRTMKKVFGTPNNQPRLYSFEMLPSK 503
           CCVGM S+PG P+ MKCHESLL+VAAGSSVAA DLRTM+KV     +QP+L SF+ +PSK
Sbjct: 302 CCVGMASVPGTPLNMKCHESLLYVAAGSSVAAFDLRTMQKVITAAVHQPKLCSFDAVPSK 361

Query: 502 SIICTGGMNSAMLWDIRKVSESVE-APVSELDGHTGAVKFLHMDHHKVVSGTSEDPYVRV 326
            +ICTGG   AMLWD+R+  ES++  P++ELDGH G V  LHMD +K+V+G  ++ YV V
Sbjct: 362 YLICTGGNGRAMLWDVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNV 421

Query: 325 WESDTGRLTNSLECSPIEGEYSNPGCSAMAVKGCQIATASFNETQGVLRYRDFRNAS 155
           WE DTG  TNSL CS  +   +  GC AM V GC+I TAS+ E  GVLR+RDF +A+
Sbjct: 422 WEVDTGVQTNSLLCSSTDD--AGSGCDAMTVDGCRITTASYYEDLGVLRFRDFNHAT 476


>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  208 bits (529), Expect = 1e-51
 Identities = 109/193 (56%), Positives = 137/193 (70%), Gaps = 4/193 (2%)
 Frame = -3

Query: 721 RLWDXXXXXXXXS-CCVGMTSLPGAPVGMKCHESLLFVAAGSSVAAIDLRTMKKVFGTPN 545
           R+WD        S CCVGMTS+PGAPV +KC ESLL+VAAGSSV AIDLRTM+KV     
Sbjct: 279 RVWDTTTSSAVRSSCCVGMTSVPGAPVDVKCCESLLYVAAGSSVVAIDLRTMQKVITVAI 338

Query: 544 NQPRLYSFEMLPSKSIICTGGMNSAMLWDIRKVSESVE-APVSELDGHTGAVKFLHMDHH 368
            QP+L SF ++PSK +ICTGG++ A LWDIR   E+++  PV+ELDGHTG V  LHMD +
Sbjct: 339 YQPKLCSFAIVPSKPLICTGGIDKAKLWDIRINQETLKPEPVAELDGHTGPVTLLHMDPY 398

Query: 367 KVVSGTSEDPYVRVWESDTGRLTNSLECSPIEGEYSNP--GCSAMAVKGCQIATASFNET 194
           K+V+G  ED Y+ VWE+DTG  TNS  C P +   S+   GCSAMAV G +I TAS+ E 
Sbjct: 399 KIVTGGPEDSYINVWETDTGAQTNSFICCPSDAASSSSGMGCSAMAVNGTRIVTASYGEE 458

Query: 193 QGVLRYRDFRNAS 155
            G++ +RDF NA+
Sbjct: 459 HGLVCFRDFFNAT 471


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