BLASTX nr result

ID: Bupleurum21_contig00020211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020211
         (450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512577.1| DNA binding protein, putative [Ricinus commu...    98   6e-19
ref|XP_002519325.1| DNA binding protein, putative [Ricinus commu...    91   1e-16
ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245...    87   2e-15
emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]    87   2e-15
ref|XP_004147629.1| PREDICTED: uncharacterized protein LOC101204...    83   2e-14

>ref|XP_002512577.1| DNA binding protein, putative [Ricinus communis]
           gi|223548538|gb|EEF50029.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 230

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = +1

Query: 112 VEGCGQCGDTP-FFLHHIRHRGLFCRLCTTCVLRINPQSFCPTCFEIHDSSAVLSPDTTT 288
           + GCG C     F LHH+R RG+  RLCT+CVLR +P SFCP CF  +D+S    P  + 
Sbjct: 15  IGGCGNCSSKETFLLHHVRVRGVHRRLCTSCVLRAHPSSFCPCCFTFYDTS---PPPPSK 71

Query: 289 TITCSKCYSNSHSVCIGPNPNKPYLCPLCTNPKSPIFNSKN 411
            I+CS C S +HS C   +P  P+LCP C +     FN +N
Sbjct: 72  RISCSNCTSFTHSHCATSSPPFPFLCPPCADANFNFFNFEN 112


>ref|XP_002519325.1| DNA binding protein, putative [Ricinus communis]
           gi|223541640|gb|EEF43189.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 186

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +1

Query: 121 CGQCG-DTPFFLHHIRHRGLFCRLCTTCVLRINPQSFCPTCFEIHDSSAVLSPDTTTTIT 297
           CG CG +  + LH++RHR  + RLCT C+L+ +   FCP CF ++D  ++L P     + 
Sbjct: 7   CGGCGGENRWLLHNVRHRAAYRRLCTNCILKTHQGLFCPFCFHVYDHDSLLVPAPEERVM 66

Query: 298 CSKCYSNSHSVCIGPNPN-KPYLCPLCTNPKSPIFN 402
           C KC S SH  C+ P  N  P+LCP C++P    FN
Sbjct: 67  CLKCPSISHLSCLPPFHNTSPFLCPPCSSPNFSFFN 102


>ref|XP_002276443.1| PREDICTED: uncharacterized protein LOC100245891 [Vitis vinifera]
          Length = 314

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
 Frame = +1

Query: 103 AIAVEGCGQCGDTP-FFLHHIRHRGLFCRLCTTCVLRINPQSFCPTCFEIHDSSAVLSPD 279
           +I    CG C  T  + LHH+RHRG++ RLCT+CVL+++P  FCP CFE +D      P 
Sbjct: 4   SITTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDP----PPS 59

Query: 280 TTTTITCSKCYSNSHSVCIGPNPNKPYLCPLCTNPKSPIFN 402
                 C KC S SH  C+  + +  ++CP C NP    F+
Sbjct: 60  PHLRSLCQKCPSISHQHCVASHSDS-FVCPPCLNPTFSFFD 99


>emb|CAN65744.1| hypothetical protein VITISV_037761 [Vitis vinifera]
          Length = 1076

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
 Frame = +1

Query: 103  AIAVEGCGQCGDTP-FFLHHIRHRGLFCRLCTTCVLRINPQSFCPTCFEIHDSSAVLSPD 279
            +I    CG C  T  + LHH+RHRG++ RLCT+CVL+++P  FCP CFE +D      P 
Sbjct: 766  SITTPECGGCSLTDRWLLHHVRHRGIYRRLCTSCVLKLHPGLFCPICFEFYDP----PPS 821

Query: 280  TTTTITCSKCYSNSHSVCIGPNPNKPYLCPLCTNPKSPIFN 402
                  C KC S SH  C+  + +  ++CP C NP    F+
Sbjct: 822  PHLRSLCQKCPSISHQHCVASHSDS-FVCPPCLNPTFSFFD 861


>ref|XP_004147629.1| PREDICTED: uncharacterized protein LOC101204799 [Cucumis sativus]
           gi|449498761|ref|XP_004160626.1| PREDICTED:
           uncharacterized protein LOC101231018 [Cucumis sativus]
          Length = 278

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
 Frame = +1

Query: 109 AVEGCGQCGDTP---FFLHHIRHRGLFCRLCTTCVLRINPQSFCPTCFEIHDSSAVLSPD 279
           ++  C QCG +    + LH++RH+  F RLCT CVL+ N   FCP CF++++ S    P 
Sbjct: 13  SISHCQQCGISQSACWILHNVRHKATFRRLCTNCVLKHNLSRFCPLCFDVYEDST--PPP 70

Query: 280 TTTTITCSKCYSNSHSVCIGPNPNKPYLCPLCTNPKSPIFN 402
           +   + C +C S SH  C+    +  +LCPLC++P+   F+
Sbjct: 71  SHHRVMCFRCPSISHLSCVSFRFSSTFLCPLCSDPRFVFFD 111


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