BLASTX nr result

ID: Bupleurum21_contig00020188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020188
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26997.3| unnamed protein product [Vitis vinifera]              254   2e-65
ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vini...   253   5e-65
ref|XP_002312409.1| predicted protein [Populus trichocarpa] gi|2...   201   2e-49
ref|XP_002527000.1| zinc finger protein, putative [Ricinus commu...   197   3e-48
ref|XP_004169000.1| PREDICTED: zinc finger protein 6-like [Cucum...   190   3e-46

>emb|CBI26997.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  254 bits (649), Expect = 2e-65
 Identities = 136/225 (60%), Positives = 160/225 (71%), Gaps = 7/225 (3%)
 Frame = +3

Query: 108 HTQHMEELQFETQLNNTNTSGHGLKLFGFNVIEEDEEVDSTKTPSGSSESGNFPATDSRK 287
           H   M E+ ++ +  +  T+G  LK+FGFNV  EDE+V+S+KTPSGS ESG FPAT  RK
Sbjct: 36  HLSLMAEIDYQAKATSAPTNGR-LKIFGFNV-SEDEDVESSKTPSGSPESGGFPATGDRK 93

Query: 288 YECQYCCREFANSQALGGHQNAHKKERQQLKRAQMLATRNAAASYMRNPIVSXXXXXXXX 467
           YECQYCCREFANSQALGGHQNAHKKERQQLKRAQM ATRNAA SY+RNP++S        
Sbjct: 94  YECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAATSYIRNPMISAFAPPPHL 153

Query: 468 XXXXXXIVLPSNTS--SASWMYMPRAAPPFQVSHGSVFQSTSTSPSVGRGAGSLMCGGGG 641
                 +V+P+  +  SASW+Y+PR  PPF VSHG VF S+S     GRGA +L    GG
Sbjct: 154 LAPAGPVVVPAGAAPQSASWVYVPRGPPPFHVSHGCVFPSSS-----GRGAATLSY-AGG 207

Query: 642 VDQSTLTSIGPVNG-----PGPSLSRFSRGDGGPTFDDAFGLDLH 761
           V +STLT+  P +        PSLSRFSRGDGGPTFDDAFGLDLH
Sbjct: 208 VGESTLTTSAPQSRAHGRVDAPSLSRFSRGDGGPTFDDAFGLDLH 252


>ref|XP_002283623.1| PREDICTED: zinc finger protein 6 [Vitis vinifera]
           gi|147769067|emb|CAN72502.1| hypothetical protein
           VITISV_027276 [Vitis vinifera]
          Length = 221

 Score =  253 bits (645), Expect = 5e-65
 Identities = 135/221 (61%), Positives = 159/221 (71%), Gaps = 7/221 (3%)
 Frame = +3

Query: 120 MEELQFETQLNNTNTSGHGLKLFGFNVIEEDEEVDSTKTPSGSSESGNFPATDSRKYECQ 299
           M E+ ++ +  +  T+G  LK+FGFNV  EDE+V+S+KTPSGS ESG FPAT  RKYECQ
Sbjct: 1   MAEIDYQAKATSAPTNGR-LKIFGFNV-SEDEDVESSKTPSGSPESGGFPATGDRKYECQ 58

Query: 300 YCCREFANSQALGGHQNAHKKERQQLKRAQMLATRNAAASYMRNPIVSXXXXXXXXXXXX 479
           YCCREFANSQALGGHQNAHKKERQQLKRAQM ATRNAA SY+RNP++S            
Sbjct: 59  YCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAATSYIRNPMISAFAPPPHLLAPA 118

Query: 480 XXIVLPSNTS--SASWMYMPRAAPPFQVSHGSVFQSTSTSPSVGRGAGSLMCGGGGVDQS 653
             +V+P+  +  SASW+Y+PR  PPF VSHG VF S+S     GRGA +L    GGV +S
Sbjct: 119 GPVVVPAGAAPQSASWVYVPRGPPPFHVSHGCVFPSSS-----GRGAATLSY-AGGVGES 172

Query: 654 TLTSIGPVNG-----PGPSLSRFSRGDGGPTFDDAFGLDLH 761
           TLT+  P +        PSLSRFSRGDGGPTFDDAFGLDLH
Sbjct: 173 TLTTSAPQSRAHGRVDAPSLSRFSRGDGGPTFDDAFGLDLH 213


>ref|XP_002312409.1| predicted protein [Populus trichocarpa] gi|222852229|gb|EEE89776.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  201 bits (511), Expect = 2e-49
 Identities = 127/245 (51%), Positives = 148/245 (60%), Gaps = 31/245 (12%)
 Frame = +3

Query: 120 MEELQFETQLNNTNTSGHGLKLFGFNVIEEDEEVDSTKTPSGSSESGNFPAT-------- 275
           M EL +ET+ N+T TS   LKLFGFNV E++E + +T + S  S S N P +        
Sbjct: 1   MAELDYETKHNSTTTSTR-LKLFGFNVSEDEELIATTYSSSLKSSSCNTPDSSSFGTATA 59

Query: 276 --DSRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMLATRNAAA---SYMRNPIV 440
             DSRKYECQYC REFANSQALGGHQNAHKKERQQLKRAQM ATRNAAA   S+ RNP++
Sbjct: 60  TGDSRKYECQYCSREFANSQALGGHQNAHKKERQQLKRAQMQATRNAAAAAVSFGRNPMI 119

Query: 441 S-XXXXXXXXXXXXXXIVLPSNTSSASWMYMPRAAPPFQVSHGSVFQSTSTSPSVGRGAG 617
           S               +V+P   +S SW+Y+PRAAPPF VSHGSVF         GRG G
Sbjct: 120 SAFAPPPHLLAQAAGQVVVPE--ASQSWVYLPRAAPPFHVSHGSVFPRGVG----GRGVG 173

Query: 618 SLMCGGGGVDQSTLTS-----------------IGPVNGPGPSLSRFSRGDGGPTFDDAF 746
           SL  GG   D    +S                 IG +NGP  SLSRFS+ DGGP+FDD  
Sbjct: 174 SLTYGGSVGDFGLASSASGPYQQVQSRAHISRVIGDLNGP-TSLSRFSKSDGGPSFDDKL 232

Query: 747 GLDLH 761
            LDLH
Sbjct: 233 SLDLH 237


>ref|XP_002527000.1| zinc finger protein, putative [Ricinus communis]
           gi|223533635|gb|EEF35372.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 247

 Score =  197 bits (501), Expect = 3e-48
 Identities = 121/245 (49%), Positives = 151/245 (61%), Gaps = 31/245 (12%)
 Frame = +3

Query: 120 MEELQFETQLNNTNTSGHGLKLFGFNVIEEDEE-----VDSTKTPSGSSESGNFPATDS- 281
           MEEL ++T+ N+T T    LKLFGF+V ++D++     +DS+   S SS S    +TDS 
Sbjct: 1   MEELDYQTKPNSTTTR---LKLFGFSVSDDDQDQLLTPIDSS-IKSSSSTSPEAASTDSN 56

Query: 282 RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMLATRNAAA-----SYMRNPIVSX 446
           RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQM ATRNAAA     S+ RNP++S 
Sbjct: 57  RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAAAAAAAVSFGRNPMISA 116

Query: 447 XXXXXXXXXXXXXIVLPSNTSSASWMYMPRAAPPFQVSHGSVFQSTST---SPSVGRGAG 617
                        +VLP+  +++SW+Y+PR APPF V+HG VF +      +  V  G G
Sbjct: 117 FAPPPHLLAPPGPVVLPA--AASSWVYLPRPAPPFHVTHGCVFPTGPAGGGASGVAGGFG 174

Query: 618 SLMCGGGGVDQSTLTSIGPVNGP----------------GP-SLSRFSRGDGGPTFDDAF 746
               GG       +  +G  NGP                GP SLSRFS+GDGGP+FD+A 
Sbjct: 175 GKSVGGLPYSGGAVGDMGFSNGPQQAQSRVHNGRPDGLHGPTSLSRFSKGDGGPSFDEAL 234

Query: 747 GLDLH 761
           GLDLH
Sbjct: 235 GLDLH 239


>ref|XP_004169000.1| PREDICTED: zinc finger protein 6-like [Cucumis sativus]
          Length = 229

 Score =  190 bits (483), Expect = 3e-46
 Identities = 112/223 (50%), Positives = 134/223 (60%), Gaps = 17/223 (7%)
 Frame = +3

Query: 144 QLNNTNTSGHGLKLFGFNVIEEDEEVDST--KTPSGSSESGNFPATDSRKYECQYCCREF 317
           Q  + +T+   LKLFGF+V E+  E D +  KTP+GSSESG F  +  RKYECQYCCREF
Sbjct: 6   QTKSNSTTPFKLKLFGFDVREDQLEDDDSAAKTPTGSSESGVFTPSTDRKYECQYCCREF 65

Query: 318 ANSQALGGHQNAHKKERQQLKRAQMLATRNAAASYMRNPIVSXXXXXXXXXXXXXXIVLP 497
           ANSQALGGHQNAHKKERQQLKRAQ+ ATRNAA +Y+RNPI+S                 P
Sbjct: 66  ANSQALGGHQNAHKKERQQLKRAQLQATRNAAVAYVRNPIISAFAPPPHLLATTAAAAAP 125

Query: 498 -----------SNTSSASWMYMPRAAPP--FQVSHGSVFQSTSTSPSVGRGAGSLMCG-- 632
                      +  +S+SW+YMPR  PP     SHG VF      P+ G G  S M    
Sbjct: 126 PGGQFLLPNPATAGTSSSWVYMPRTQPPTIHVSSHGCVF------PTAGGGGTSAMLSAY 179

Query: 633 GGGVDQSTLTSIGPVNGPGPSLSRFSRGDGGPTFDDAFGLDLH 761
           GGGV  S   ++GP    G SL RFS+G+ G  FD+  GLDLH
Sbjct: 180 GGGVGNSMAFTMGP-QVEGVSLKRFSKGENGSGFDEGIGLDLH 221


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