BLASTX nr result
ID: Bupleurum21_contig00020169
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00020169 (712 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327045.1| predicted protein [Populus trichocarpa] gi|2... 59 1e-06 ref|XP_002271102.1| PREDICTED: GRAM domain-containing protein 1A... 57 3e-06 emb|CAN61799.1| hypothetical protein VITISV_044292 [Vitis vinifera] 57 3e-06 ref|XP_003535199.1| PREDICTED: GRAM domain-containing protein 1A... 56 6e-06 >ref|XP_002327045.1| predicted protein [Populus trichocarpa] gi|222835360|gb|EEE73795.1| predicted protein [Populus trichocarpa] Length = 275 Score = 58.9 bits (141), Expect = 1e-06 Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 4/132 (3%) Frame = +2 Query: 14 AENLEMPNVRSDLSQLDSG-RINQDSIQ-VQESF-GGDSVSSFFRGSIVKVGSYFKAQSQ 184 +EN P + Q+ S ++Q + VQ +F S++S + K+ S+FK+QSQ Sbjct: 118 SENSYKPRGHVRMQQVSSSVAVSQQADDLVQGNFTNATSIASSLGEYVTKLFSFFKSQSQ 177 Query: 185 FPSXXXXXXXXXFLLMQISIIVLLAKPQQIHVVPQANYLSSMNSRSID-GAETMTLLDKQ 361 S +LMQ+SI+VLL +PQ +HV Y+ + + + + AE + L+++ Sbjct: 178 I-SLVLVIAFIVIILMQVSILVLLNRPQTVHVASPEYYMGGLRAGAGEKSAEAVAWLERR 236 Query: 362 ISHLKDEMRIIE 397 HLKDEM ++E Sbjct: 237 THHLKDEMFMVE 248 >ref|XP_002271102.1| PREDICTED: GRAM domain-containing protein 1A [Vitis vinifera] gi|297734616|emb|CBI16667.3| unnamed protein product [Vitis vinifera] Length = 639 Score = 57.4 bits (137), Expect = 3e-06 Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 2/60 (3%) Frame = +2 Query: 224 LLMQISIIVLLAKPQQIHVVPQANYLSSM--NSRSIDGAETMTLLDKQISHLKDEMRIIE 397 LLMQ+SI+VLLA+PQ++ V+ QA+Y++ M + +E + L+K+I HLKDEM ++E Sbjct: 550 LLMQLSIVVLLARPQRVQVISQADYMNGMDISGSGERSSEAVAWLEKRIHHLKDEMFMVE 609 >emb|CAN61799.1| hypothetical protein VITISV_044292 [Vitis vinifera] Length = 638 Score = 57.4 bits (137), Expect = 3e-06 Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 2/60 (3%) Frame = +2 Query: 224 LLMQISIIVLLAKPQQIHVVPQANYLSSM--NSRSIDGAETMTLLDKQISHLKDEMRIIE 397 LLMQ+SI+VLLA+PQ++ V+ QA+Y++ M + +E + L+K+I HLKDEM ++E Sbjct: 549 LLMQLSIVVLLARPQRVQVISQADYMNGMDISGSGERSSEAVAWLEKRIHHLKDEMFMVE 608 >ref|XP_003535199.1| PREDICTED: GRAM domain-containing protein 1A-like [Glycine max] Length = 633 Score = 56.2 bits (134), Expect = 6e-06 Identities = 32/101 (31%), Positives = 51/101 (50%) Frame = +2 Query: 95 VQESFGGDSVSSFFRGSIVKVGSYFKAQSQFPSXXXXXXXXXFLLMQISIIVLLAKPQQI 274 +Q +F S S F+ + K S ++ S F + Q SI+VLLA+PQ I Sbjct: 511 LQGNFIEPSSVSLFKEFMTKFRSSLRSHSNLSLLLITIVALIFFIQQFSILVLLARPQHI 570 Query: 275 HVVPQANYLSSMNSRSIDGAETMTLLDKQISHLKDEMRIIE 397 H+ + ++ MN+ + L+K+I HLKDEM ++E Sbjct: 571 HMNTPVDIMNRMNNEVTRSPSDIAWLEKRIHHLKDEMYMVE 611