BLASTX nr result

ID: Bupleurum21_contig00020169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020169
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327045.1| predicted protein [Populus trichocarpa] gi|2...    59   1e-06
ref|XP_002271102.1| PREDICTED: GRAM domain-containing protein 1A...    57   3e-06
emb|CAN61799.1| hypothetical protein VITISV_044292 [Vitis vinifera]    57   3e-06
ref|XP_003535199.1| PREDICTED: GRAM domain-containing protein 1A...    56   6e-06

>ref|XP_002327045.1| predicted protein [Populus trichocarpa] gi|222835360|gb|EEE73795.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
 Frame = +2

Query: 14  AENLEMPNVRSDLSQLDSG-RINQDSIQ-VQESF-GGDSVSSFFRGSIVKVGSYFKAQSQ 184
           +EN   P     + Q+ S   ++Q +   VQ +F    S++S     + K+ S+FK+QSQ
Sbjct: 118 SENSYKPRGHVRMQQVSSSVAVSQQADDLVQGNFTNATSIASSLGEYVTKLFSFFKSQSQ 177

Query: 185 FPSXXXXXXXXXFLLMQISIIVLLAKPQQIHVVPQANYLSSMNSRSID-GAETMTLLDKQ 361
             S          +LMQ+SI+VLL +PQ +HV     Y+  + + + +  AE +  L+++
Sbjct: 178 I-SLVLVIAFIVIILMQVSILVLLNRPQTVHVASPEYYMGGLRAGAGEKSAEAVAWLERR 236

Query: 362 ISHLKDEMRIIE 397
             HLKDEM ++E
Sbjct: 237 THHLKDEMFMVE 248


>ref|XP_002271102.1| PREDICTED: GRAM domain-containing protein 1A [Vitis vinifera]
           gi|297734616|emb|CBI16667.3| unnamed protein product
           [Vitis vinifera]
          Length = 639

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
 Frame = +2

Query: 224 LLMQISIIVLLAKPQQIHVVPQANYLSSM--NSRSIDGAETMTLLDKQISHLKDEMRIIE 397
           LLMQ+SI+VLLA+PQ++ V+ QA+Y++ M  +      +E +  L+K+I HLKDEM ++E
Sbjct: 550 LLMQLSIVVLLARPQRVQVISQADYMNGMDISGSGERSSEAVAWLEKRIHHLKDEMFMVE 609


>emb|CAN61799.1| hypothetical protein VITISV_044292 [Vitis vinifera]
          Length = 638

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
 Frame = +2

Query: 224 LLMQISIIVLLAKPQQIHVVPQANYLSSM--NSRSIDGAETMTLLDKQISHLKDEMRIIE 397
           LLMQ+SI+VLLA+PQ++ V+ QA+Y++ M  +      +E +  L+K+I HLKDEM ++E
Sbjct: 549 LLMQLSIVVLLARPQRVQVISQADYMNGMDISGSGERSSEAVAWLEKRIHHLKDEMFMVE 608


>ref|XP_003535199.1| PREDICTED: GRAM domain-containing protein 1A-like [Glycine max]
          Length = 633

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 32/101 (31%), Positives = 51/101 (50%)
 Frame = +2

Query: 95  VQESFGGDSVSSFFRGSIVKVGSYFKAQSQFPSXXXXXXXXXFLLMQISIIVLLAKPQQI 274
           +Q +F   S  S F+  + K  S  ++ S             F + Q SI+VLLA+PQ I
Sbjct: 511 LQGNFIEPSSVSLFKEFMTKFRSSLRSHSNLSLLLITIVALIFFIQQFSILVLLARPQHI 570

Query: 275 HVVPQANYLSSMNSRSIDGAETMTLLDKQISHLKDEMRIIE 397
           H+    + ++ MN+        +  L+K+I HLKDEM ++E
Sbjct: 571 HMNTPVDIMNRMNNEVTRSPSDIAWLEKRIHHLKDEMYMVE 611


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