BLASTX nr result
ID: Bupleurum21_contig00020162
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00020162
(1517 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACL93279.1| coat protein [Carrot cryptic virus] 507 e-141
ref|YP_002308575.1| coat protein [Beet cryptic virus 1] gi|16979... 469 e-130
gb|ACC69173.1| putative capsid protein [Vicia cryptic virus] 459 e-126
gb|ABN71235.1| coat protein [Vicia cryptic virus] gi|126023256|g... 458 e-126
ref|YP_272125.1| coat protein [Vicia cryptic virus] gi|61187016|... 456 e-126
>gb|ACL93279.1| coat protein [Carrot cryptic virus]
Length = 490
Score = 507 bits (1305), Expect = e-141
Identities = 247/442 (55%), Positives = 307/442 (69%), Gaps = 2/442 (0%)
Frame = +3
Query: 87 KRNRHPQGTIPANSTAGTSPAPALLEIAFATPMYTE-RASVNKFVPDAQYLFHVLGLCDQ 263
+R+R+P G P +S APALLE+ ATPMYTE R S N FVPDAQ LFHVL +CDQ
Sbjct: 48 RRSRNPHGPTPISSRVSAPSAPALLELPAATPMYTEQRRSANFFVPDAQMLFHVLSICDQ 107
Query: 264 MMNSTERFTRTTPAWIPIVSQLYVSVLWLFMIISVTIDSSYGMMFNTFYQQLKSVLRIDD 443
MMNSTERF R++PAW+PIVSQLY+SVLW M I V ++S YG F++F +L SVLRID+
Sbjct: 108 MMNSTERFLRSSPAWMPIVSQLYISVLWNVMTIHVFVNSGYGSAFSSFLTELYSVLRIDE 167
Query: 444 CMIPGPLVPFFQSLAAINGPYEWIGDFYSTIPSPLALWDAANFRPVSHLARIVPIPAILL 623
CMIPGPLVPFFQ+L A+NGP++WIGD +P+ ALW+ A F ++ R VPIPA++L
Sbjct: 168 CMIPGPLVPFFQALGAVNGPFDWIGDIVPGLPNFSALWNEAGFHANNNYVRQVPIPAVIL 227
Query: 624 DQLYAFSQFAPAANTDSTYFTFEWYRNVFSLTNANVDPLLRIGPQLCGSLHTDMAQHDSA 803
DQL+ FSQ+A AN STY TF+WYRNVF ++ L RIGPQLCGSL T AQ+D+A
Sbjct: 228 DQLHYFSQYAVPANQQSTYTTFQWYRNVFQQGLGAMNRLNRIGPQLCGSLFTTQAQYDAA 287
Query: 804 RLFWNSRFEGNFTRINATNNQPQLVTYNHLLGFASPTGTSQHDWFSTIATIMSKYAQFFN 983
R FWN+ TR NA QP Y L GF S TG Q +WF++++ M+KY QFFN
Sbjct: 288 RNFWNASLNAGITRANANEGQPAFSNYRQLFGFESQTGVLQVNWFTSVSIAMNKYTQFFN 347
Query: 984 GSVPLKSISTRGIGSVAIYATAFDTVPTRNWLYPPSADISAFTTARFLPRREIPSGMLLQ 1163
GSVPLKSI GIG+V IY T + TR W+YPP I FTT R+ PRREIP + +Q
Sbjct: 348 GSVPLKSILPTGIGAVVIYGTPMNNPSTRTWVYPPDTGIEPFTTTRYPPRREIPDALSIQ 407
Query: 1164 FTHGYPELEEQAEQFGIIACTNIKW-TNIPTQNNWVAINDALTHSGSYWNQPTFRFSIPI 1340
F+H ELEEQAEQ+ ++ TNIKW N+ TQNNW AI + G YWN +RFS P+
Sbjct: 408 FSHADHELEEQAEQYAMLTHTNIKWYQNLETQNNWTAIAAGGLYLGDYWNMMPYRFSAPL 467
Query: 1341 NLKNQYHQVVSSLYHQQYANTA 1406
+ K+QY Q+++S YHQQ AN A
Sbjct: 468 HYKSQYAQIIASRYHQQAANKA 489
>ref|YP_002308575.1| coat protein [Beet cryptic virus 1] gi|169793710|gb|ACA81390.1| coat
protein [Beet cryptic virus 1]
Length = 489
Score = 469 bits (1208), Expect = e-130
Identities = 234/440 (53%), Positives = 294/440 (66%), Gaps = 2/440 (0%)
Frame = +3
Query: 87 KRNRHPQGTIPANSTAGTSPAPALLEIAFATPMYT-ERASVNKFVPDAQYLFHVLGLCDQ 263
+R+R P+G +P + TS APALLE++ PMYT R VN FVPDAQ LFHVLG+CDQ
Sbjct: 48 RRSRTPRGPVPQATPGSTSGAPALLELSAGLPMYTVPRRGVNTFVPDAQMLFHVLGICDQ 107
Query: 264 MMNSTERFTRTTPAWIPIVSQLYVSVLWLFMIISVTIDSSYGMMFNTFYQQLKSVLRIDD 443
MM ST+RFTR++PAWIPIVSQLY+SVLW+ I+ V + S YG ++++ L LRID+
Sbjct: 108 MMLSTDRFTRSSPAWIPIVSQLYISVLWMVAILRVFVASGYGALYSSLINDLIGHLRIDE 167
Query: 444 CMIPGPLVPFFQSLAAINGPYEWIGDFYSTIPSPLALWDAANFRPVSHLARIVPIPAILL 623
CMIPGPLVPFFQSL A+ GPYEWIGD + P L LWDA NF P + LAR P+PAI+L
Sbjct: 168 CMIPGPLVPFFQSLGAVCGPYEWIGDIVAAFPDFLTLWDAENFCPTADLARTCPVPAIML 227
Query: 624 DQLYAFSQFAPAANTDSTYFTFEWYRNVFSLTNANVDPLLRIGPQLCGSLHTDMAQHDSA 803
DQL+ F+ + A Y F+WYRN+FSL + RIGPQLCGSL++ AQ DSA
Sbjct: 228 DQLHYFATWTIPAE-QILYTNFQWYRNIFSLGLGAGNANNRIGPQLCGSLYSPRAQVDSA 286
Query: 804 RLFWNSRFEGNFTRINATNNQPQLVTYNHLLGFASPTGTSQHDWFSTIATIMSKYAQFFN 983
R FWN+ TR NA TY LLGF S GT Q DWF +A +M KY Q+FN
Sbjct: 287 RAFWNAALSSGITRTNAAEANGAFYTYAQLLGFISQNGTLQLDWFQQVAVVMQKYTQYFN 346
Query: 984 GSVPLKSISTRGIGSVAIYATAFDTVPTRNWLYPPSADISAFTTARFLPRREIPSGMLLQ 1163
GS PLKSIST GIG+VA+ TR+W YP + I F +RF PRREIP+ + +
Sbjct: 347 GSTPLKSISTIGIGAVAVIGAPTPDPATRDWFYPAATGIEPFLCSRFAPRREIPNTLGMI 406
Query: 1164 FTHGYPELEEQAEQFGIIACTNIKWT-NIPTQNNWVAINDALTHSGSYWNQPTFRFSIPI 1340
F+H ELEEQAEQ+ I+ TNI+W+ ++ QN W A+ND + +G YW +RFS I
Sbjct: 407 FSHADHELEEQAEQYAILTHTNIRWSPSVVAQNAWTAVNDGASRNGDYWIMMNYRFSTRI 466
Query: 1341 NLKNQYHQVVSSLYHQQYAN 1400
+LK Q+ QV++S YHQQ AN
Sbjct: 467 SLKTQFAQVIASRYHQQAAN 486
>gb|ACC69173.1| putative capsid protein [Vicia cryptic virus]
Length = 487
Score = 459 bits (1180), Expect = e-126
Identities = 233/439 (53%), Positives = 289/439 (65%), Gaps = 2/439 (0%)
Frame = +3
Query: 90 RNRHPQGTIPANSTAGTSPAPALLEIAFATPMYTE-RASVNKFVPDAQYLFHVLGLCDQM 266
R R P G IPA +++G + APALLE+A A PMYTE R S N F+PD+Q +FH LG+CD M
Sbjct: 49 RKRTPHGPIPAATSSGNTSAPALLELAAAYPMYTEQRRSFNFFIPDSQMMFHSLGICDSM 108
Query: 267 MNSTERFTRTTPAWIPIVSQLYVSVLWLFMIISVTIDSSYGMMFNTFYQQLKSVLRIDDC 446
MNST+RF R++PAW+PIVSQLY+SVLW MII + + Y F L + L+I++C
Sbjct: 109 MNSTDRFLRSSPAWLPIVSQLYISVLWNVMIIRILSHTGYAPSFTDLLNTLTTDLQIEEC 168
Query: 447 MIPGPLVPFFQSLAAINGPYEWIGDFYSTIPSPLALWDAANFRPVSHLARIVPIPAILLD 626
M+PGPLVPFFQSLA+INGP++WIGD +P +LWDA NF P + R VPIPAILLD
Sbjct: 169 MVPGPLVPFFQSLASINGPFDWIGDITPALPGFDSLWDATNFTPHASYTRFVPIPAILLD 228
Query: 627 QLYAFSQFAPAANTDSTYFTFEWYRNVFSLTNANVDPLLRIGPQLCGSLHTDMAQHDSAR 806
QLY + + N Y TF WYRN+F+ T AN LLR+GP LCGSL T Q D+AR
Sbjct: 229 QLYYCATYV-GVNQGDLYPTFTWYRNIFTRTGANTPALLRMGPNLCGSLFTTSNQFDAAR 287
Query: 807 LFWNSRFEGNFTRINATNNQPQLVTYNHLLGFASPTGTSQHDWFSTIATIMSKYAQFFNG 986
+W + F FTR+N T Y LLG S TG Q WF + +M KYAQ FNG
Sbjct: 288 TYWRACFGTGFTRVNVT--AAAFTDYLQLLGLRSQTGEPQTAWFQNVTMVMQKYAQHFNG 345
Query: 987 SVPLKSISTRGIGSVAIYATAFDTVPTRNWLYPPSADISAFTTARFLPRREIPSGMLLQF 1166
SVPLKSI GIGSVA+ T + R+WLYPP+A+I FTT RF PRREIP+ + ++F
Sbjct: 346 SVPLKSIDLTGIGSVALTGTPVNNTAVRDWLYPPNANIEPFTTGRFNPRREIPAQLRVRF 405
Query: 1167 THGYPELEEQAEQFGIIACTNIKW-TNIPTQNNWVAINDALTHSGSYWNQPTFRFSIPIN 1343
+H ELE QAEQ+ I A TNI+W NI TQ+ AIN A H G YWN FR + +
Sbjct: 406 SHSDHELELQAEQYAIAAHTNIRWAANIATQHERTAINPAHLHQGDYWNMTPFRHTGHLG 465
Query: 1344 LKNQYHQVVSSLYHQQYAN 1400
LK QY Q+++S YHQ AN
Sbjct: 466 LKTQYAQLIASRYHQLAAN 484
>gb|ABN71235.1| coat protein [Vicia cryptic virus] gi|126023256|gb|ABN71236.1| coat
protein [Vicia cryptic virus] gi|126023260|gb|ABN71238.1|
coat protein [Vicia cryptic virus]
gi|126023264|gb|ABN71240.1| coat protein [Vicia cryptic
virus]
Length = 487
Score = 458 bits (1179), Expect = e-126
Identities = 232/439 (52%), Positives = 289/439 (65%), Gaps = 2/439 (0%)
Frame = +3
Query: 90 RNRHPQGTIPANSTAGTSPAPALLEIAFATPMYTE-RASVNKFVPDAQYLFHVLGLCDQM 266
R R P G IPA +++G + APALLE+A A PMYTE R S N F+PD+Q +FH LG+CD M
Sbjct: 49 RKRTPHGPIPAATSSGNTSAPALLELAAAYPMYTEQRRSFNFFIPDSQMMFHSLGICDSM 108
Query: 267 MNSTERFTRTTPAWIPIVSQLYVSVLWLFMIISVTIDSSYGMMFNTFYQQLKSVLRIDDC 446
MNST+RF R++PAW+PIVSQLY+SVLW MII + + Y F L + L+I++C
Sbjct: 109 MNSTDRFLRSSPAWLPIVSQLYISVLWNVMIIRILSHTGYAPSFTDLLNTLTTDLQIEEC 168
Query: 447 MIPGPLVPFFQSLAAINGPYEWIGDFYSTIPSPLALWDAANFRPVSHLARIVPIPAILLD 626
M+PGPLVPFFQSLA+INGP++WIGD +P +LWDA NF P + R VPIPAILLD
Sbjct: 169 MVPGPLVPFFQSLASINGPFDWIGDITPALPGFDSLWDATNFTPHASYTRFVPIPAILLD 228
Query: 627 QLYAFSQFAPAANTDSTYFTFEWYRNVFSLTNANVDPLLRIGPQLCGSLHTDMAQHDSAR 806
QLY + + N Y TF WYRN+F+ T AN LLR+GP LCGSL T Q D+AR
Sbjct: 229 QLYYCATYV-GVNQGDLYPTFTWYRNIFTRTGANTPALLRMGPNLCGSLFTTSNQFDAAR 287
Query: 807 LFWNSRFEGNFTRINATNNQPQLVTYNHLLGFASPTGTSQHDWFSTIATIMSKYAQFFNG 986
+W + F FTR+N T Y LLG S TG Q WF + +M KYAQ FNG
Sbjct: 288 TYWRACFGTGFTRVNVT--AAAFTNYLQLLGLRSQTGEPQTAWFQNVTMVMQKYAQHFNG 345
Query: 987 SVPLKSISTRGIGSVAIYATAFDTVPTRNWLYPPSADISAFTTARFLPRREIPSGMLLQF 1166
SVPLKSI GIG+VA+ T + R+WLYPP+A+I FTT RF PRREIP+ + ++F
Sbjct: 346 SVPLKSIDLTGIGAVALTGTPVNNTAVRDWLYPPNANIEPFTTGRFNPRREIPAQLRIRF 405
Query: 1167 THGYPELEEQAEQFGIIACTNIKW-TNIPTQNNWVAINDALTHSGSYWNQPTFRFSIPIN 1343
+H ELE QAEQ+ I A TNI+W NI TQ+ AIN A H G YWN FR + +
Sbjct: 406 SHSDHELELQAEQYAIAAHTNIRWAANIATQHERTAINPAHLHQGDYWNMTPFRHTGHLG 465
Query: 1344 LKNQYHQVVSSLYHQQYAN 1400
LK QY Q+++S YHQ AN
Sbjct: 466 LKTQYAQLIASRYHQLAAN 484
>ref|YP_272125.1| coat protein [Vicia cryptic virus] gi|61187016|gb|AAX39024.1| coat
protein [Vicia cryptic virus]
Length = 487
Score = 456 bits (1174), Expect = e-126
Identities = 231/439 (52%), Positives = 288/439 (65%), Gaps = 2/439 (0%)
Frame = +3
Query: 90 RNRHPQGTIPANSTAGTSPAPALLEIAFATPMYTE-RASVNKFVPDAQYLFHVLGLCDQM 266
R R P G IPA +++G + APALLE+A A PMYTE R S N F+PD+Q +FH LG+CD M
Sbjct: 49 RKRTPHGPIPAATSSGNTSAPALLELAAAYPMYTEQRRSFNFFIPDSQMMFHSLGICDSM 108
Query: 267 MNSTERFTRTTPAWIPIVSQLYVSVLWLFMIISVTIDSSYGMMFNTFYQQLKSVLRIDDC 446
MNST+RF R++PAW+PIVSQLY+SVLW MII + + Y F L + L+I++C
Sbjct: 109 MNSTDRFLRSSPAWLPIVSQLYISVLWNVMIIRILSHTGYAPSFTDLLNTLTTDLQIEEC 168
Query: 447 MIPGPLVPFFQSLAAINGPYEWIGDFYSTIPSPLALWDAANFRPVSHLARIVPIPAILLD 626
M+PGPLVPFFQSLA+ NGP++WIGD +P +LWDA NF P + R VPIPAILLD
Sbjct: 169 MVPGPLVPFFQSLASTNGPFDWIGDITPALPGFDSLWDATNFTPHASYTRFVPIPAILLD 228
Query: 627 QLYAFSQFAPAANTDSTYFTFEWYRNVFSLTNANVDPLLRIGPQLCGSLHTDMAQHDSAR 806
QLY + + N Y TF WYRN+F+ T AN LLR+GP LCGSL T Q D+AR
Sbjct: 229 QLYYCATYV-GVNQGDLYPTFTWYRNIFTRTGANTPALLRMGPNLCGSLFTTSNQFDAAR 287
Query: 807 LFWNSRFEGNFTRINATNNQPQLVTYNHLLGFASPTGTSQHDWFSTIATIMSKYAQFFNG 986
+W + F FTR+N T Y LLG S TG Q WF + +M KYAQ FNG
Sbjct: 288 TYWRACFGTGFTRVNVT--AAAFTNYLQLLGLRSQTGEPQTAWFQNVTMVMQKYAQHFNG 345
Query: 987 SVPLKSISTRGIGSVAIYATAFDTVPTRNWLYPPSADISAFTTARFLPRREIPSGMLLQF 1166
SVPLKSI GIG+VA+ T + R+WLYPP+A+I FTT RF PRREIP+ + ++F
Sbjct: 346 SVPLKSIDLTGIGAVALTGTPVNNTAVRDWLYPPNANIEPFTTGRFNPRREIPAQLRIRF 405
Query: 1167 THGYPELEEQAEQFGIIACTNIKW-TNIPTQNNWVAINDALTHSGSYWNQPTFRFSIPIN 1343
+H ELE QAEQ+ I A TNI+W NI TQ+ AIN A H G YWN FR + +
Sbjct: 406 SHSDHELELQAEQYAIAAHTNIRWAANIATQHERTAINPAHLHQGDYWNMTPFRHTGHLG 465
Query: 1344 LKNQYHQVVSSLYHQQYAN 1400
LK QY Q+++S YHQ AN
Sbjct: 466 LKTQYAQLIASRYHQLAAN 484