BLASTX nr result

ID: Bupleurum21_contig00020134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020134
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...   172   2e-40
emb|CBI19420.3| unnamed protein product [Vitis vinifera]              172   2e-40
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]   144   7e-32
ref|XP_002510115.1| transcription initiation factor, putative [R...   140   7e-31
ref|XP_003549383.1| PREDICTED: uncharacterized protein LOC100783...   128   4e-27

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score =  172 bits (435), Expect = 2e-40
 Identities = 94/159 (59%), Positives = 114/159 (71%)
 Frame = +2

Query: 59  MDPSMMKLLEEDEDENMHSGADVDAFTAALNRDIEGDTSASQPSESDSAALTPGSNHNSG 238
           MDPS+MKLLEEDEDE MHSGADV+A TAALNRDIEGDTS SQPS+S++  L+ GSNH S 
Sbjct: 1   MDPSIMKLLEEDEDETMHSGADVEALTAALNRDIEGDTSTSQPSDSEN-VLSQGSNHTSS 59

Query: 239 QLFTQWQTSSHDEIAHRQNQPDVNVFQQQVQHSSVEVLNQHRSGSENQLQQTDTSKELNS 418
           QLF+QWQTSS DE    Q+Q ++   QQQ  +SS     QH SG ENQ QQ D S ++N 
Sbjct: 60  QLFSQWQTSSQDENTDSQSQQELKSLQQQELNSSDLEQKQHGSGVENQ-QQVDASHDINR 118

Query: 419 VPVSQKQSQDNLPQQQHTEQKNLHVPHLPSIQKSEKSTV 535
           +P+ QKQSQD+ PQQ  +E   +     P IQ SEK++V
Sbjct: 119 LPLQQKQSQDD-PQQLQSEPNPIQFSQAPGIQISEKNSV 156



 Score =  109 bits (272), Expect = 2e-21
 Identities = 79/193 (40%), Positives = 102/193 (52%), Gaps = 13/193 (6%)
 Frame = +1

Query: 763  AMQLRTHYDKLRKNEISKDVFVKHMRGLVGDHMLKLAVVRLQEQAPRSSQVAPNQVALKS 942
            A+QLRT Y KL+KNEI K  FV+ MRG+VGD MLKLAV         + Q  P+Q  L+S
Sbjct: 218  ALQLRTLYAKLKKNEIPKLAFVRLMRGIVGDQMLKLAV------DAWNYQTGPSQFQLQS 271

Query: 943  QVPAQQQHMNAVADGAK--------QFSESHSFAQLNQQKSLSSSVDPSGPISAPQGLTD 1098
            Q  A QQH+   ++ +         Q   S+   + N QK     ++        QG   
Sbjct: 272  QASALQQHLKTPSNSSHMPSSAMKVQTDSSYPTTETNSQK--PREMERQSDSHGMQGSQM 329

Query: 1099 SSNRTMDNNAHIMRDIKQERE-SPFPIQGLNKQQQQHIHFPPS-FPSYGTTGSNYHQYSM 1272
            SS+         +   KQERE S  P+QG NKQQQQH+HF  + F  YG+ G NYH Y+ 
Sbjct: 330  SSSS--------LSSAKQEREHSVMPMQGPNKQQQQHLHFSQTPFTMYGSAGGNYHSYTG 381

Query: 1273 T---SSAQSLKQQ 1302
            T   +SA S KQQ
Sbjct: 382  TNVNTSATSTKQQ 394


>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  172 bits (435), Expect = 2e-40
 Identities = 94/159 (59%), Positives = 114/159 (71%)
 Frame = +2

Query: 59  MDPSMMKLLEEDEDENMHSGADVDAFTAALNRDIEGDTSASQPSESDSAALTPGSNHNSG 238
           MDPS+MKLLEEDEDE MHSGADV+A TAALNRDIEGDTS SQPS+S++  L+ GSNH S 
Sbjct: 1   MDPSIMKLLEEDEDETMHSGADVEALTAALNRDIEGDTSTSQPSDSEN-VLSQGSNHTSS 59

Query: 239 QLFTQWQTSSHDEIAHRQNQPDVNVFQQQVQHSSVEVLNQHRSGSENQLQQTDTSKELNS 418
           QLF+QWQTSS DE    Q+Q ++   QQQ  +SS     QH SG ENQ QQ D S ++N 
Sbjct: 60  QLFSQWQTSSQDENTDSQSQQELKSLQQQELNSSDLEQKQHGSGVENQ-QQVDASHDINR 118

Query: 419 VPVSQKQSQDNLPQQQHTEQKNLHVPHLPSIQKSEKSTV 535
           +P+ QKQSQD+ PQQ  +E   +     P IQ SEK++V
Sbjct: 119 LPLQQKQSQDD-PQQLQSEPNPIQFSQAPGIQISEKNSV 156



 Score =  124 bits (311), Expect = 5e-26
 Identities = 78/189 (41%), Positives = 110/189 (58%), Gaps = 9/189 (4%)
 Frame = +1

Query: 763  AMQLRTHYDKLRKNEISKDVFVKHMRGLVGDHMLKLAVVRLQEQAPRSSQVAPNQVALKS 942
            A+QLRT Y KL+KNEI K  FV+ MRG+VGD MLKLAV++LQ+     S   P+Q  L+S
Sbjct: 218  ALQLRTLYAKLKKNEIPKLAFVRLMRGIVGDQMLKLAVMKLQQ-----SPTGPSQFQLQS 272

Query: 943  QVPAQQQHMNAVADGAKQFSESHSFAQLNQQKSLSSSVDPSGPISAPQGLTDSSNRTMDN 1122
            Q  A QQH+   +    QFS+ HSF+QL+Q+   + +     P SA +  TDSS  T + 
Sbjct: 273  QASALQQHLKTPSSIGSQFSDPHSFSQLHQKGQSTPADSSHMPSSAMKVQTDSSYPTTET 332

Query: 1123 NAHIMRDIKQERE------SPFPIQGLNKQQQQHIHFPPSFPSYGTTGSNYHQYSMT--- 1275
            N+   R+++++ +      S      L+  +Q+  H  P F  YG+ G NYH Y+ T   
Sbjct: 333  NSQKPREMERQSDSHGMQGSQMSSSSLSSAKQEREHSTP-FTMYGSAGGNYHSYTGTNVN 391

Query: 1276 SSAQSLKQQ 1302
            +SA S KQQ
Sbjct: 392  TSATSTKQQ 400


>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
          Length = 906

 Score =  144 bits (362), Expect = 7e-32
 Identities = 80/143 (55%), Positives = 99/143 (69%)
 Frame = +2

Query: 107 MHSGADVDAFTAALNRDIEGDTSASQPSESDSAALTPGSNHNSGQLFTQWQTSSHDEIAH 286
           MHSGADV+A TAALNRDIEGDTS SQPS+S++  L+ GSNH S QLF+QWQTSS DE   
Sbjct: 1   MHSGADVEALTAALNRDIEGDTSTSQPSDSENV-LSQGSNHTSSQLFSQWQTSSQDENTD 59

Query: 287 RQNQPDVNVFQQQVQHSSVEVLNQHRSGSENQLQQTDTSKELNSVPVSQKQSQDNLPQQQ 466
            Q+Q ++   QQQ  +SS     QH SG ENQ QQ D S ++N +P+ QKQSQD+ PQQ 
Sbjct: 60  SQSQQELKSLQQQELNSSDLEQKQHGSGVENQ-QQVDASHDINRLPLQQKQSQDD-PQQL 117

Query: 467 HTEQKNLHVPHLPSIQKSEKSTV 535
            +E   +     P IQ SEK++V
Sbjct: 118 QSEPNPIQFSQAPGIQISEKNSV 140



 Score =  121 bits (303), Expect = 4e-25
 Identities = 90/243 (37%), Positives = 119/243 (48%), Gaps = 63/243 (25%)
 Frame = +1

Query: 763  AMQLRTHYDKLRKNEISKDVFVKHMRGLVGDHMLKLAVVRLQEQAPRSSQVAPNQVALKS 942
            A+QLRT Y KL+KNEI K  FV+ MRG+VGD MLKLAV++LQ+     S   P+Q  L+S
Sbjct: 202  ALQLRTLYAKLKKNEIPKLAFVRLMRGIVGDQMLKLAVMKLQQ-----SPTGPSQFQLQS 256

Query: 943  QVPAQQQHMNAVADGAKQFSESHSFAQLNQQKSLSSSVDPSGPISAPQGLTDSSNRTMDN 1122
            Q  A QQH+   +    QFS+ HSF+QL+Q+   + +     P SA +  TDSS  T + 
Sbjct: 257  QASALQQHLKTPSSIGSQFSDPHSFSQLHQKGQSTPADSSHMPSSAMKVQTDSSYPTTET 316

Query: 1123 NAHIMRDI----------------------KQERE-SPFPIQGLNK-------------- 1191
            N+   R++                      KQERE S  P+QG NK              
Sbjct: 317  NSQKPREMERQSDSHGMQGSQMSSSSLSSAKQEREHSVMPMQGPNKQQLQQQQQQHQQQQ 376

Query: 1192 ----------------------QQQQHIHFPPS-FPSYGTTGSNYHQYSMT---SSAQSL 1293
                                  QQ+QH+HF  + F  YG+ G NYH Y+ T   +SA S 
Sbjct: 377  QQQQQQQQQQQQQQQQQQQQPQQQKQHLHFSQTPFTMYGSAGGNYHSYTGTNVNTSATST 436

Query: 1294 KQQ 1302
            KQQ
Sbjct: 437  KQQ 439


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
           gi|223550816|gb|EEF52302.1| transcription initiation
           factor, putative [Ricinus communis]
          Length = 925

 Score =  140 bits (353), Expect = 7e-31
 Identities = 83/182 (45%), Positives = 106/182 (58%), Gaps = 4/182 (2%)
 Frame = +2

Query: 59  MDPSMMKLLEEDEDENMHSGADVDAFTAALNRDIEGDTSASQPSESDSAALTPGSNHNSG 238
           MDPS+MKLLEEDEDE+MHSGADV+AF AALNRDI GD S SQPS++   AL+  +N    
Sbjct: 1   MDPSIMKLLEEDEDESMHSGADVEAFQAALNRDIGGDASTSQPSDT-GTALSHETNQTPS 59

Query: 239 QLFTQWQTSSHDEIAHRQNQPDVNVFQQQVQHSSVEVLNQHRSGSENQLQQTDTSKELNS 418
                WQ++  DE  +  +Q      QQQ QHS V  L QH S  ENQ  + D  +E + 
Sbjct: 60  LPSANWQSTIQDENENAPSQQQQQQPQQQEQHSLVTELKQHESAGENQQLKNDVKQESSH 119

Query: 419 VPVSQKQSQDNLPQQQHTEQKNLHVPHLPSIQKSEKSTVGQETQD----PSSISQYLRSQ 586
           +P+ QKQ QD + QQ   EQ  +  P     Q SE +T+ +   D    P + SQY+  Q
Sbjct: 120 LPLHQKQPQDTV-QQSQAEQAPVQTPRTIRTQISETNTMPKSEPDKMQIPDTESQYMNVQ 178

Query: 587 KM 592
            M
Sbjct: 179 NM 180



 Score = 82.8 bits (203), Expect = 2e-13
 Identities = 64/188 (34%), Positives = 93/188 (49%), Gaps = 9/188 (4%)
 Frame = +1

Query: 766  MQLRTHYDKLRKNEISKDVFVKHMRGLVGDHMLKLAVVRLQEQAPRSSQVAPNQVALKSQ 945
            MQL   ++KLR+N++ K+ FV+ MRG+VGD +L+LAV + Q      SQ    Q  L+SQ
Sbjct: 220  MQLEILFNKLRRNQVPKEQFVRLMRGIVGDQVLRLAVEQWQ------SQQGSRQSQLQSQ 273

Query: 946  VPAQQQH----MNAVADGAKQFSESHSFAQLNQQKSLSSSVDPSGPISAPQGLTDSSNRT 1113
               +Q +    ++A A  A Q     S+            V+        Q    SS  T
Sbjct: 274  AFGRQHNVRMPVSATASSAVQVLADSSYPPAEGNAHRPRGVEHLPDSHGMQASQFSSPST 333

Query: 1114 MDNNAHIMRDIKQERE-SPFPIQGLNKQQQQHIHFPP-SFPSYGTTGSNYHQYSMT---S 1278
                      + Q+RE S   + G +KQQQQH+HFP  SF +YG++   +H YS T   +
Sbjct: 334  --------STLSQDRERSSISVPGHSKQQQQHLHFPQNSFSTYGSSSGTHHPYSGTNINT 385

Query: 1279 SAQSLKQQ 1302
            S  S+K Q
Sbjct: 386  SGSSMKTQ 393


>ref|XP_003549383.1| PREDICTED: uncharacterized protein LOC100783067 [Glycine max]
          Length = 984

 Score =  128 bits (321), Expect = 4e-27
 Identities = 85/182 (46%), Positives = 104/182 (57%), Gaps = 4/182 (2%)
 Frame = +2

Query: 59  MDPSMMKLLEEDEDENMHSGADVDAFTAALNRDIEGDTSASQPSESDSAALTPGSNHNSG 238
           MDPS+MKLLE+DEDE MHSG DV+AF AALNRDI GD S SQ S SD A L+ GSN+ S 
Sbjct: 1   MDPSIMKLLEDDEDEAMHSGVDVEAFQAALNRDIGGDVSTSQFSGSD-AVLSQGSNNTSS 59

Query: 239 QLFTQWQTSSHDEIAHRQNQPDVNVFQQQVQHSSVEVLNQHRSGSENQLQQTDTSKELNS 418
           Q  +QW TS+HD     Q Q      QQ    S VE+  + R     QL     S+++N+
Sbjct: 60  QSLSQWPTSNHDSQTDCQKQESKTAQQQDQPSSGVEL--KQRGSLAEQLHHV-ASQDINN 116

Query: 419 VPVSQKQSQDNLPQQQHTEQKNLHVPHLPSIQKSEKSTVGQ----ETQDPSSISQYLRSQ 586
             +SQKQSQD    Q    Q +LH      IQ S K  V      +  +PSS SQY + Q
Sbjct: 117 PHLSQKQSQDEC-HQAPALQVSLHNSQAIGIQNSGKDPVLNNEVVKNHNPSSESQYAKLQ 175

Query: 587 KM 592
           +M
Sbjct: 176 QM 177



 Score =  113 bits (283), Expect = 9e-23
 Identities = 78/205 (38%), Positives = 114/205 (55%), Gaps = 25/205 (12%)
 Frame = +1

Query: 763  AMQLRTHYDKLRKNEISKDVFVKHMRGLVGDHMLKLAVVRLQEQAPRSSQVAPNQVALKS 942
            AMQL+T + KL+K EI KD FV+ M+G+VGD ML+LA+ ++Q Q     Q  PNQ +   
Sbjct: 218  AMQLQTLFAKLKKEEIPKDSFVRLMKGIVGDQMLRLALAKVQVQ----PQTRPNQASAGQ 273

Query: 943  QVPAQQQHMNAVADGAKQFSESHSFAQLNQQKSLSSSVDPSGPISAPQGLTDSSNRTMDN 1122
            Q P     M  V  GA Q ++ H+ A+++ Q+S++++VD S        +  S+ +TM++
Sbjct: 274  QHP---MRMPTVGSGASQLNDPHALAEMH-QRSMNAAVDQS-------RMGSSAGQTMES 322

Query: 1123 NAHIMR--DIKQERESPFP---------------------IQGLNKQQQQHIHFPPSFPS 1233
            NA   +  D+K E +   P                     IQGLNKQQQQH+HFP    +
Sbjct: 323  NARKSQELDVKIESQGLQPSQLTSSSSNKIAQETERTSVHIQGLNKQQQQHLHFP---SA 379

Query: 1234 YGTTGSNYHQYSMT--SSAQSLKQQ 1302
            YG +G NY+ +S T  SS  S+K Q
Sbjct: 380  YGNSGGNYNPFSGTTSSSTSSIKSQ 404


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