BLASTX nr result

ID: Bupleurum21_contig00020133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020133
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161089.1| PREDICTED: LOW QUALITY PROTEIN: polygalactur...   172   3e-41
ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like ...   172   3e-41
dbj|BAH56488.1| polygalacturonase 1 [Prunus persica]                  171   6e-41
ref|XP_003613215.1| Polygalacturonase [Medicago truncatula] gi|3...   169   2e-40
ref|XP_002311773.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40

>ref|XP_004161089.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase At1g48100-like
           [Cucumis sativus]
          Length = 423

 Score =  172 bits (435), Expect = 3e-41
 Identities = 79/110 (71%), Positives = 93/110 (84%)
 Frame = -1

Query: 335 VSNVTVRDVKMHETQNGVRIKTWQGGSGSVQGVMFANIQVSEVQNPIIIDQFYCDGEKCN 156
           VSN+TVRDV MH+T NGVRIKTWQGGSGSVQ V+F+NIQ+SEVQ PI+IDQFYCD  KC+
Sbjct: 269 VSNITVRDVTMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAKCS 328

Query: 155 NHTSAVGISAISFQNIKGTYTKRPVHFACSDTMPCTGVTLNTIELSAKQE 6
           N TSAV +S I+++ I+GTYT +PVHFACSD +PCT VTL TIEL   QE
Sbjct: 329 NQTSAVALSGINYERIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQE 378


>ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
          Length = 505

 Score =  172 bits (435), Expect = 3e-41
 Identities = 79/110 (71%), Positives = 93/110 (84%)
 Frame = -1

Query: 335 VSNVTVRDVKMHETQNGVRIKTWQGGSGSVQGVMFANIQVSEVQNPIIIDQFYCDGEKCN 156
           VSN+TVRDV MH+T NGVRIKTWQGGSGSVQ V+F+NIQ+SEVQ PI+IDQFYCD  KC+
Sbjct: 351 VSNITVRDVTMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAKCS 410

Query: 155 NHTSAVGISAISFQNIKGTYTKRPVHFACSDTMPCTGVTLNTIELSAKQE 6
           N TSAV +S I+++ I+GTYT +PVHFACSD +PCT VTL TIEL   QE
Sbjct: 411 NQTSAVALSGINYERIRGTYTVKPVHFACSDNLPCTDVTLTTIELKPLQE 460


>dbj|BAH56488.1| polygalacturonase 1 [Prunus persica]
          Length = 510

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/110 (70%), Positives = 93/110 (84%)
 Frame = -1

Query: 335 VSNVTVRDVKMHETQNGVRIKTWQGGSGSVQGVMFANIQVSEVQNPIIIDQFYCDGEKCN 156
           VSNVTVRDVKMH T  GVRIKTWQGGSGSVQ +MF+NIQVSEV  PI+IDQFYCD  KC 
Sbjct: 354 VSNVTVRDVKMHNTLTGVRIKTWQGGSGSVQNIMFSNIQVSEVATPIMIDQFYCDKSKCQ 413

Query: 155 NHTSAVGISAISFQNIKGTYTKRPVHFACSDTMPCTGVTLNTIELSAKQE 6
           N TSAV +S +++ NI+GTYT +PVHFACSD++PCTGV+L+TI+L +  E
Sbjct: 414 NETSAVAVSGVNYVNIQGTYTTKPVHFACSDSLPCTGVSLDTIQLKSVDE 463


>ref|XP_003613215.1| Polygalacturonase [Medicago truncatula] gi|355514550|gb|AES96173.1|
           Polygalacturonase [Medicago truncatula]
          Length = 543

 Score =  169 bits (428), Expect = 2e-40
 Identities = 76/110 (69%), Positives = 93/110 (84%)
 Frame = -1

Query: 335 VSNVTVRDVKMHETQNGVRIKTWQGGSGSVQGVMFANIQVSEVQNPIIIDQFYCDGEKCN 156
           VSN+TVRDV +H++ NGVRIKTWQGGSGSVQGV+F+NIQVSEVQ PI+IDQFYCD   C 
Sbjct: 390 VSNITVRDVNIHDSMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRVCT 449

Query: 155 NHTSAVGISAISFQNIKGTYTKRPVHFACSDTMPCTGVTLNTIELSAKQE 6
           NHTSAV ++ I+++ IKGTYT +PVHFACSD++PC  V+L T+EL   QE
Sbjct: 450 NHTSAVSLAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTVELKPIQE 499


>ref|XP_002311773.1| predicted protein [Populus trichocarpa] gi|222851593|gb|EEE89140.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/110 (70%), Positives = 91/110 (82%)
 Frame = -1

Query: 335 VSNVTVRDVKMHETQNGVRIKTWQGGSGSVQGVMFANIQVSEVQNPIIIDQFYCDGEKCN 156
           VSN+TVRDV MH T  GVR+KTWQGGSGSVQGV+F+NIQVSEVQ PI+IDQFYCD  KC 
Sbjct: 364 VSNITVRDVVMHGTMTGVRVKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRKCK 423

Query: 155 NHTSAVGISAISFQNIKGTYTKRPVHFACSDTMPCTGVTLNTIELSAKQE 6
           N TSAV +S I+++NI+GTYT +PVHFACSD +PC  V+L TIEL   QE
Sbjct: 424 NQTSAVALSGITYENIRGTYTVKPVHFACSDALPCMDVSLTTIELKPLQE 473


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