BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020123
         (1339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymera...   264   4e-68
emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]   255   2e-65
ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ...   241   4e-61
ref|XP_002515912.1| RNA polymerase II mediator complex subunit, ...   234   4e-59
ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymera...   232   1e-58

>ref|XP_002282496.1| PREDICTED: putative mediator of RNA polymerase II transcription
            subunit 6 [Vitis vinifera]
          Length = 258

 Score =  264 bits (674), Expect = 4e-68
 Identities = 123/145 (84%), Positives = 131/145 (90%), Gaps = 3/145 (2%)
 Frame = -1

Query: 1183 MASTPMLPPNSAAGNPNFDGN---VRAAPGTDMTGICFRDQLWLNTYPLDRNLVFDYFAL 1013
            MASTPM PPN AAGNPNFDGN   V   PGTDMTGICFRDQLWLN+YPLDRNLVFDYFAL
Sbjct: 1    MASTPMAPPNPAAGNPNFDGNPPAVPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFAL 60

Query: 1012 SPFYDWTCNNETIRMRSIHPLDLSNLSKMTGIEYMLSEVMEPHLFVFRKQKRDSPEKVTP 833
            SPFYDWTCNNE +R+RSIHPLD S+LSKMTG EYML+EVMEPHLFV RKQKRD PEKVTP
Sbjct: 61   SPFYDWTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTP 120

Query: 832  MLTYYVLDGSIYQAPQLCNVFASRV 758
            MLTYY+LDGSIYQAPQLCNVF +R+
Sbjct: 121  MLTYYILDGSIYQAPQLCNVFTARI 145


>emb|CAN68925.1| hypothetical protein VITISV_044247 [Vitis vinifera]
          Length = 253

 Score =  255 bits (652), Expect = 2e-65
 Identities = 119/140 (85%), Positives = 127/140 (90%), Gaps = 3/140 (2%)
 Frame = -1

Query: 1168 MLPPNSAAGNPNFDGNVRAAP---GTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYD 998
            M PPN AAGNPNFDGN  AAP   GTDMTGICFRDQLWLN+YPLDRNLVFDYFALSPFYD
Sbjct: 1    MAPPNPAAGNPNFDGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYD 60

Query: 997  WTCNNETIRMRSIHPLDLSNLSKMTGIEYMLSEVMEPHLFVFRKQKRDSPEKVTPMLTYY 818
            WTCNNE +R+RSIHPLD S+LSKMTG EYML+EVMEPHLFV RKQKRD PEKVTPMLTYY
Sbjct: 61   WTCNNEQLRLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYY 120

Query: 817  VLDGSIYQAPQLCNVFASRV 758
            +LDGSIYQAPQLCNVF +R+
Sbjct: 121  ILDGSIYQAPQLCNVFTARI 140


>ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
            transcription subunit 6-like [Cucumis sativus]
          Length = 260

 Score =  241 bits (614), Expect = 4e-61
 Identities = 119/149 (79%), Positives = 127/149 (85%), Gaps = 7/149 (4%)
 Frame = -1

Query: 1183 MASTPMLPPNSAAGNPNFDGNVRAA----PGTDMT---GICFRDQLWLNTYPLDRNLVFD 1025
            MA+ P  PP +  G  NF+G    A    PGTDMT   GICFRDQLWLNTYPLDRNLVFD
Sbjct: 1    MATPP--PPTAPPGTGNFEGGPLPAAPQPPGTDMTNLPGICFRDQLWLNTYPLDRNLVFD 58

Query: 1024 YFALSPFYDWTCNNETIRMRSIHPLDLSNLSKMTGIEYMLSEVMEPHLFVFRKQKRDSPE 845
            YFALSPFYDWTCNNE +RMRSIHPLDLS LSKMTGIEYML+EVMEPHLFVFRKQKRD PE
Sbjct: 59   YFALSPFYDWTCNNEQLRMRSIHPLDLSQLSKMTGIEYMLNEVMEPHLFVFRKQKRDGPE 118

Query: 844  KVTPMLTYYVLDGSIYQAPQLCNVFASRV 758
            KVTPMLTYY+LDGSIYQAPQLC+VFA+RV
Sbjct: 119  KVTPMLTYYILDGSIYQAPQLCSVFAARV 147


>ref|XP_002515912.1| RNA polymerase II mediator complex subunit, putative [Ricinus
            communis] gi|223544817|gb|EEF46332.1| RNA polymerase II
            mediator complex subunit, putative [Ricinus communis]
          Length = 251

 Score =  234 bits (597), Expect = 4e-59
 Identities = 110/131 (83%), Positives = 120/131 (91%), Gaps = 5/131 (3%)
 Frame = -1

Query: 1135 NFDGNVRAA-----PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNETIR 971
            NFDGN  A      PGTDMTGICFRDQLWLNTYPLDRNL+FDYFALSPFYDWTCNNE +R
Sbjct: 9    NFDGNPLAPAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLR 68

Query: 970  MRSIHPLDLSNLSKMTGIEYMLSEVMEPHLFVFRKQKRDSPEKVTPMLTYYVLDGSIYQA 791
            ++SIHPLDLS+LSKMTG EYML+EV+EP+LFV RKQKRDSPEKVTPMLTYYVLDGSIYQA
Sbjct: 69   LQSIHPLDLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQA 128

Query: 790  PQLCNVFASRV 758
            PQLCNVFA+R+
Sbjct: 129  PQLCNVFAARI 139


>ref|XP_003531638.1| PREDICTED: putative mediator of RNA polymerase II transcription
            subunit 6-like [Glycine max]
          Length = 252

 Score =  232 bits (592), Expect = 1e-58
 Identities = 109/134 (81%), Positives = 119/134 (88%), Gaps = 2/134 (1%)
 Frame = -1

Query: 1153 SAAGNPNFDGNVRAA--PGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNE 980
            +A GN   +G   A   PGTDMTGICFRDQLWLN++PLDRNLVFDYFALSPFYDWTCNNE
Sbjct: 3    TAPGNQMLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNE 62

Query: 979  TIRMRSIHPLDLSNLSKMTGIEYMLSEVMEPHLFVFRKQKRDSPEKVTPMLTYYVLDGSI 800
             +RMRS+HPLD+S LSKMTG EYMLSEVMEPHLFV RKQKRDSP+KVTPML YYVLDGSI
Sbjct: 63   QLRMRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSI 122

Query: 799  YQAPQLCNVFASRV 758
            YQAPQLCNVFA+R+
Sbjct: 123  YQAPQLCNVFAARI 136