BLASTX nr result

ID: Bupleurum21_contig00020106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020106
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306286.1| predicted protein [Populus trichocarpa] gi|1...   150   2e-34
ref|XP_002272466.1| PREDICTED: uncharacterized protein At4g08330...   133   2e-29
gb|ACD56614.1| predicted protein [Gossypioides kirkii]                126   3e-27
ref|XP_002300988.1| predicted protein [Populus trichocarpa] gi|2...   123   3e-26
ref|XP_003542997.1| PREDICTED: uncharacterized protein At4g08330...   121   1e-25

>ref|XP_002306286.1| predicted protein [Populus trichocarpa] gi|118485259|gb|ABK94489.1|
           unknown [Populus trichocarpa]
           gi|222855735|gb|EEE93282.1| predicted protein [Populus
           trichocarpa]
          Length = 162

 Score =  150 bits (378), Expect = 2e-34
 Identities = 73/143 (51%), Positives = 94/143 (65%)
 Frame = -3

Query: 500 VPHVNYSCGACGYELNLNSSNRNASITGHEYAKSIKRRTISFYSVDETKFIQINQLRCKP 321
           +PHVNYSCG+CGY+LNLNS NRN    G  Y KSIK+ +ISF+S+DET+F QI +LRC P
Sbjct: 24  LPHVNYSCGSCGYQLNLNSCNRNTPDIGVNYKKSIKKGSISFFSIDETRFTQIEELRCTP 83

Query: 320 YFESKHSWGLFRRRTKLLCGKCRKLIGVSYDENINNNXXXXXXXXXXXXXXXXXSMPWDG 141
           YF S  SWGLF+RRTKLLC KC   +G++Y EN  ++                  + WDG
Sbjct: 84  YFNSMRSWGLFQRRTKLLCYKCGNHLGIAYKENNTSS------SPLRLGKCRSDLISWDG 137

Query: 140 ITGNKMYNMKITSLQPSQLFDKS 72
           I+  ++Y +KI SLQP+   D S
Sbjct: 138 ISDARIYVIKIRSLQPASTEDYS 160


>ref|XP_002272466.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic [Vitis
           vinifera] gi|296082623|emb|CBI21628.3| unnamed protein
           product [Vitis vinifera]
          Length = 154

 Score =  133 bits (335), Expect = 2e-29
 Identities = 70/142 (49%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
 Frame = -3

Query: 491 VNYSCGACGYELNLNSSNRNASITGHEYAKSIKRRTISFYSVDETKFIQINQLRCKPYFE 312
           V+YSCG+CGY+LNLNS NR  S+ G +Y KSIK+  ISF+S+DET+F Q N+LRC PYF 
Sbjct: 26  VHYSCGSCGYQLNLNSCNRT-SVLGSKYEKSIKKGIISFFSIDETRFTQTNELRCLPYFN 84

Query: 311 SKHSWGLFRRRTKLLCGKCRKLIGVSYDENINNNXXXXXXXXXXXXXXXXXSMPWDGIT- 135
           S+ SWGLFRRR+KLLC KC   IG +Y  N  +                  S  WDGI+ 
Sbjct: 85  SRCSWGLFRRRSKLLCKKCGNHIGNAYKTNNRSG--------------KLDSSAWDGISD 130

Query: 134 GNKMYNMKITSLQPSQLFDKSA 69
            +++Y++KI +LQPS   +  A
Sbjct: 131 SSRIYDIKICALQPSSSLESDA 152


>gb|ACD56614.1| predicted protein [Gossypioides kirkii]
          Length = 218

 Score =  126 bits (317), Expect = 3e-27
 Identities = 63/131 (48%), Positives = 87/131 (66%)
 Frame = -3

Query: 482 SCGACGYELNLNSSNRNASITGHEYAKSIKRRTISFYSVDETKFIQINQLRCKPYFESKH 303
           SCG+CGYELNL+SS+RN +  G +Y KSIKR  ISF+S+DE++F Q+++ +C PYF S+H
Sbjct: 9   SCGSCGYELNLSSSSRNTATIGSKYGKSIKRGIISFFSIDESRFTQVDEFQCVPYF-SRH 67

Query: 302 SWGLFRRRTKLLCGKCRKLIGVSYDENINNNXXXXXXXXXXXXXXXXXSMPWDGITGNKM 123
           SWGLFR RTKLLC KC   IG +YDE  +                   S P + ++ ++ 
Sbjct: 68  SWGLFRHRTKLLCRKCGNHIGNAYDEKTSG---------YPLVLDKSNSSPSNEVSSHRK 118

Query: 122 YNMKITSLQPS 90
           YN++I +LQPS
Sbjct: 119 YNVRIRALQPS 129


>ref|XP_002300988.1| predicted protein [Populus trichocarpa] gi|222842714|gb|EEE80261.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  123 bits (308), Expect = 3e-26
 Identities = 62/137 (45%), Positives = 88/137 (64%)
 Frame = -3

Query: 494 HVNYSCGACGYELNLNSSNRNASITGHEYAKSIKRRTISFYSVDETKFIQINQLRCKPYF 315
           HV+YSCG CGYELNL+SSNRN S  G +Y KSIKR  ISF+ +DE++F Q+++ +C P+F
Sbjct: 24  HVSYSCGICGYELNLSSSNRNTSSIGSKYGKSIKRGIISFFFIDESRFTQVDEFQCIPFF 83

Query: 314 ESKHSWGLFRRRTKLLCGKCRKLIGVSYDENINNNXXXXXXXXXXXXXXXXXSMPWDGIT 135
            S++SWGLF RRT LLC KC   IG++YD+  +                   S     ++
Sbjct: 84  -SRNSWGLFHRRTALLCRKCGNNIGIAYDDKAS---------AYPLVADGSDSSSVSEVS 133

Query: 134 GNKMYNMKITSLQPSQL 84
            ++ Y++KI +LQPS +
Sbjct: 134 KHRKYDVKIRALQPSSV 150


>ref|XP_003542997.1| PREDICTED: uncharacterized protein At4g08330, chloroplastic-like
           [Glycine max]
          Length = 158

 Score =  121 bits (303), Expect = 1e-25
 Identities = 62/134 (46%), Positives = 86/134 (64%)
 Frame = -3

Query: 491 VNYSCGACGYELNLNSSNRNASITGHEYAKSIKRRTISFYSVDETKFIQINQLRCKPYFE 312
           V YSCG CGYELNL+SSNRN +  G +Y KSIKR  ISF+S+D ++F Q+++++C P+F+
Sbjct: 24  VRYSCGTCGYELNLSSSNRNTASIGSKYGKSIKRGIISFFSIDLSRFTQVDEIQCVPHFD 83

Query: 311 SKHSWGLFRRRTKLLCGKCRKLIGVSYDENINNNXXXXXXXXXXXXXXXXXSMPWDGITG 132
            KHSWGLFRRRTKLLC KC   IG +Y+   ++                  S P   +  
Sbjct: 84  -KHSWGLFRRRTKLLCRKCGNHIGNAYNGYTSS---------FPLVTDGAESSPSSKVVS 133

Query: 131 NKMYNMKITSLQPS 90
           +  Y+++I +LQPS
Sbjct: 134 HTKYDIRIRALQPS 147


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