BLASTX nr result

ID: Bupleurum21_contig00020093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020093
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ86065.1| unknown [Medicago truncatula] gi|388494518|gb|AFK...   138   2e-30
gb|ACJ83847.1| unknown [Medicago truncatula]                          135   1e-29
ref|XP_002262663.1| PREDICTED: uncharacterized protein LOC100246...   134   4e-29
ref|XP_002321288.1| predicted protein [Populus trichocarpa] gi|2...   134   5e-29
ref|XP_004144388.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-...   131   3e-28

>gb|ACJ86065.1| unknown [Medicago truncatula] gi|388494518|gb|AFK35325.1| unknown
           [Medicago truncatula]
          Length = 242

 Score =  138 bits (348), Expect = 2e-30
 Identities = 98/249 (39%), Positives = 124/249 (49%), Gaps = 30/249 (12%)
 Frame = -2

Query: 865 MNTQESRHPVTYARNTRRKKRPLEVDLNVAPPAE---------------NRYQG------ 749
           M+T+ SR PV   R  RR+K  +++DLN  P AE               NR Q       
Sbjct: 1   MSTRTSRVPVGI-RTNRRRKAAIDLDLNRVPAAEHSTARNPIAENPSGENREQERRLTQL 59

Query: 748 GITDVE------SLVGLSVQQGSSTLHPP---IDLEALDDDDVIISSPRAFAEAKNKAGR 596
           G  +VE        V +   Q      P    ID+EA+DDDDV++SSPRAFAEAKN + R
Sbjct: 60  GPQEVEVQANQQQEVEVQANQLQLVAQPEPTLIDVEAIDDDDVVLSSPRAFAEAKNNSRR 119

Query: 595 PHGRAIVVDVDSINXXXXXXXXXXXXXXXXALQEVVNGDLYINLEASGYSRRDSXXXXXX 416
             GR  VVDVD                     + + N DLYINL+AS  +  +S      
Sbjct: 120 NRGRT-VVDVDLEEQIRLSNNNRNKRRRESPKRSIFNCDLYINLDASSSNTMESVKKPPE 178

Query: 415 XXXXXXXXXXXXVFTCPVCMGTLVEEMSTKCGHIFXXXXXXXXXXAQNKCPTCRRKISMK 236
                        FTCP+CMG +VEEMST+CGHIF          AQ KCPTCR+KI++K
Sbjct: 179 PPKEPV-------FTCPICMGPMVEEMSTRCGHIFCKSCIKAAISAQAKCPTCRKKITVK 231

Query: 235 DTIRVYLPT 209
           + IRV+LPT
Sbjct: 232 ELIRVFLPT 240


>gb|ACJ83847.1| unknown [Medicago truncatula]
          Length = 247

 Score =  135 bits (341), Expect = 1e-29
 Identities = 99/254 (38%), Positives = 126/254 (49%), Gaps = 35/254 (13%)
 Frame = -2

Query: 865 MNTQESRHPVTYARNTRRKKRPLEVDLNVAPPAE---------------NRYQG------ 749
           M+T+ SR PV   R  RR+K  +++DLN  P AE               NR Q       
Sbjct: 1   MSTRTSRVPVGI-RTNRRRKAAIDLDLNRVPAAEHSTARNPIAENPSGENREQERRLTQL 59

Query: 748 GITDVE------SLVGLSVQQGSSTLHPP---IDLEALDDDDVIISSPRAFAEAKNKAGR 596
           G  +VE        V +   Q      P    ID+EA+DDDDV++SSPRAFAEAKN + R
Sbjct: 60  GPQEVEVQANQQQEVEVQANQLQLVAQPEPTLIDVEAIDDDDVVLSSPRAFAEAKNNSRR 119

Query: 595 PHGRAIVVDVDSINXXXXXXXXXXXXXXXXALQE-----VVNGDLYINLEASGYSRRDSX 431
             GR  VVDVD +                   +E     + N DLYINL+AS  +  +S 
Sbjct: 120 NRGRT-VVDVDLVMFFAEEQIRLSNNNRNKRRRESPKRSIFNCDLYINLDASSSNTMESV 178

Query: 430 XXXXXXXXXXXXXXXXXVFTCPVCMGTLVEEMSTKCGHIFXXXXXXXXXXAQNKCPTCRR 251
                             FTCP+CMG +VEEMST+CGHIF          AQ KCPTCR+
Sbjct: 179 KKPPEPPKEPV-------FTCPICMGPMVEEMSTRCGHIFCKSCIKAAISAQAKCPTCRK 231

Query: 250 KISMKDTIRVYLPT 209
           KI++K+ IRV+LPT
Sbjct: 232 KITVKELIRVFLPT 245


>ref|XP_002262663.1| PREDICTED: uncharacterized protein LOC100246586 [Vitis vinifera]
          Length = 209

 Score =  134 bits (337), Expect = 4e-29
 Identities = 85/210 (40%), Positives = 112/210 (53%)
 Frame = -2

Query: 841 PVTYARNTRRKKRPLEVDLNVAPPAENRYQGGITDVESLVGLSVQQGSSTLHPPIDLEAL 662
           P+ YAR++RR+K  L +DLN  PP + R Q G     S+  + V   +      ID+EA+
Sbjct: 10  PLRYARSSRRRKTVLNLDLNDTPPTDTRDQEG----PSIRTMPVPPAA------IDVEAI 59

Query: 661 DDDDVIISSPRAFAEAKNKAGRPHGRAIVVDVDSINXXXXXXXXXXXXXXXXALQEVVNG 482
           DD+ V+ SS  AFA A+N + R  GR  VVDVD                     Q ++N 
Sbjct: 60  DDE-VVESSATAFAAARNNSRRIRGRT-VVDVDLEVQTTRPLNNRNKRRRAPPNQTIIND 117

Query: 481 DLYINLEASGYSRRDSXXXXXXXXXXXXXXXXXXVFTCPVCMGTLVEEMSTKCGHIFXXX 302
           D YINLE+S    R++                   F CP+CMG LV+EMSTKCGHIF   
Sbjct: 118 DRYINLESSNSLLRENKPPEQTWHVPPLPPKEPT-FNCPICMGQLVDEMSTKCGHIFCKM 176

Query: 301 XXXXXXXAQNKCPTCRRKISMKDTIRVYLP 212
                  AQ KCPTCR++++MKDTIR+YLP
Sbjct: 177 CIKAAISAQGKCPTCRKRVTMKDTIRIYLP 206


>ref|XP_002321288.1| predicted protein [Populus trichocarpa] gi|222862061|gb|EEE99603.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  134 bits (336), Expect = 5e-29
 Identities = 89/219 (40%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
 Frame = -2

Query: 865 MNTQESRHPVTYARNTRRKKRPLEVDLNVAPPAENRYQGGITDVESLVGLSVQQGSSTLH 686
           M+TQ         R  RR+K  L  DLN APP E R   G +      G+   Q   +L 
Sbjct: 1   MSTQTQGVKSPPLRGYRRRKTVL--DLN-APPTEGRGDEGTSSRTEPQGVQASQQGQSLP 57

Query: 685 PP-IDLEALDDDDVIISSPRAFAEAKNKAGRPHGRAIVVDVDSINXXXXXXXXXXXXXXX 509
           PP ID++  DDD VI SSP AFAEAKN + R  GRA+VVDV+S                 
Sbjct: 58  PPTIDVDVFDDD-VIESSPTAFAEAKNNSRRARGRAVVVDVESGRTSRLSHNNLNKRRRV 116

Query: 508 XALQEVVNGDLYINLEASGYSRRDSXXXXXXXXXXXXXXXXXXVFTCPVCMGTLVEEMST 329
              Q ++N DLYINLE    S   S                   F CP+C+  LVEEMST
Sbjct: 117 PPNQTIINCDLYINLEGGSSSSSRSMRENVQTLPPKEPT-----FNCPICLCPLVEEMST 171

Query: 328 KCGHIFXXXXXXXXXXAQNKCPTCRRKISMKDTIRVYLP 212
           KCGHIF           Q KCPTCR++++ K+ IRV+LP
Sbjct: 172 KCGHIFCKTCIADAIKRQAKCPTCRKRVTNKELIRVFLP 210


>ref|XP_004144388.1| PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Cucumis sativus]
           gi|449523007|ref|XP_004168516.1| PREDICTED: E3
           ubiquitin-protein ligase RNF4-like [Cucumis sativus]
          Length = 206

 Score =  131 bits (330), Expect = 3e-28
 Identities = 88/218 (40%), Positives = 113/218 (51%)
 Frame = -2

Query: 865 MNTQESRHPVTYARNTRRKKRPLEVDLNVAPPAENRYQGGITDVESLVGLSVQQGSSTLH 686
           M+TQ  R   T   + R+    L++DLN  PP ENR QG  + +  L    V Q      
Sbjct: 1   MSTQAMRGHTTRGYHRRKS---LDLDLNSMPPTENRDQGETSQLR-LQDAQVNQQQPVQP 56

Query: 685 PPIDLEALDDDDVIISSPRAFAEAKNKAGRPHGRAIVVDVDSINXXXXXXXXXXXXXXXX 506
             ID+EA+DDD VI SS RAFAEAKNK+ R + R  VVDVD+                  
Sbjct: 57  AMIDIEAIDDD-VIESSARAFAEAKNKSRR-NARKNVVDVDAEERSRVSNNNRSKRRRDV 114

Query: 505 ALQEVVNGDLYINLEASGYSRRDSXXXXXXXXXXXXXXXXXXVFTCPVCMGTLVEEMSTK 326
           + +  VN DL INLEAS  S +                     F+CP+CMG LVEE ST+
Sbjct: 115 SNRPSVNSDLLINLEASNSSMK-----------VKPAPPKEPKFSCPICMGPLVEETSTR 163

Query: 325 CGHIFXXXXXXXXXXAQNKCPTCRRKISMKDTIRVYLP 212
           CGHIF           Q+KCPTCR++++ K+ IRV+LP
Sbjct: 164 CGHIFCKACIRAAIGVQSKCPTCRKRVTAKELIRVFLP 201


Top