BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020085
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   227   1e-57
ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|2...   199   2e-49
emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]   196   3e-48

>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  227 bits (578), Expect = 1e-57
 Identities = 118/184 (64%), Positives = 141/184 (76%)
 Frame = -3

Query: 553 DKMPDSKHTFAWNTLIQTHLRNGEFDSAVTTYSQMLLDGVTPDHHTLPRILSVSRLLRNL 374
           D++P S +TFAWN LIQTHL NG+ D  V+TY QMLL GV PD HT+PRIL+ +R   + 
Sbjct: 51  DEIPVS-NTFAWNNLIQTHLTNGDSDRVVSTYRQMLLRGVRPDKHTIPRILTAARHTSSF 109

Query: 373 HFGKQLHGQALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLARF 194
            FGKQ+HG ALK GLSS  YV SAL+E+YG L GA AAK +F KS   RN+VSWTL++R 
Sbjct: 110 SFGKQVHGHALKLGLSSESYVISALLEMYGRLDGANAAKLVFCKS-ARRNSVSWTLISRL 168

Query: 193 YLKEDKPNLAVDLFNQMVKSDVEIDSLSLATAIAACGMLKSLKEGRNVHRISKSCALESD 14
           Y+ EDKP LAVD+F QMV+S  EID L+L TAI ACGMLKSL+EGR VH I+K C LE+D
Sbjct: 169 YIMEDKPGLAVDMFKQMVESKSEIDPLALVTAIVACGMLKSLQEGRYVHEIAKKCGLEAD 228

Query: 13  VLVS 2
           VLVS
Sbjct: 229 VLVS 232



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 1/167 (0%)
 Frame = -3

Query: 553 DKMPDSKHTFAWNTLIQTHLRNGEFDSAVTTYSQMLLDGVTPDHHTLPRILSVSRLLRNL 374
           D+MP SK   +W  + + +++NG F+  +  + QM ++GV PD   +  IL         
Sbjct: 253 DRMP-SKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPDSLAISSILPACGRGAAH 311

Query: 373 HFGKQLHGQALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLARF 194
             GK++H   L+ G+     V +A++++Y      E+A  +F      R+ +SWT++   
Sbjct: 312 KQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIF-AGMKDRDAISWTVMILG 370

Query: 193 YLKEDKPNLAVDLFNQMVK-SDVEIDSLSLATAIAACGMLKSLKEGR 56
           Y    +  L VDLF +M K S VEID ++ A A+ AC   + +++GR
Sbjct: 371 YSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGR 417



 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 44/163 (26%), Positives = 87/163 (53%)
 Frame = -3

Query: 535 KHTFAWNTLIQTHLRNGEFDSAVTTYSQMLLDGVTPDHHTLPRILSVSRLLRNLHFGKQL 356
           +++ +W  + + ++   +   AV  + QM+      D   L   +    +L++L  G+ +
Sbjct: 157 RNSVSWTLISRLYIMEDKPGLAVDMFKQMVESKSEIDPLALVTAIVACGMLKSLQEGRYV 216

Query: 355 HGQALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLARFYLKEDK 176
           H  A K GL +   V ++L+++Y      + A+ +FD+ P S++ +SWT + R Y+K   
Sbjct: 217 HEIAKKCGLEADVLVSNSLLKMYIDCGSIKDARAVFDRMP-SKDVISWTEIFRGYVKNGG 275

Query: 175 PNLAVDLFNQMVKSDVEIDSLSLATAIAACGMLKSLKEGRNVH 47
            N  + LF QM    V+ DSL++++ + ACG   + K+G+ +H
Sbjct: 276 FNEGLKLFRQMSMEGVKPDSLAISSILPACGRGAAHKQGKEIH 318


>ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 429

 Score =  202 bits (515), Expect = 2e-50
 Identities = 102/176 (57%), Positives = 128/176 (72%)
 Frame = -3

Query: 529 TFAWNTLIQTHLRNGEFDSAVTTYSQMLLDGVTPDHHTLPRILSVSRLLRNLHFGKQLHG 350
           TFAWN LIQTHL NG+    ++TY QML  GV PD HTLPRI+  +R   +L  GKQLH 
Sbjct: 24  TFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHA 83

Query: 349 QALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLARFYLKEDKPN 170
           QA K G SS  YV ++LIELYG L  A+ AKWL DKS   RN+VSWT+LA+ YL+EDKP+
Sbjct: 84  QAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKS-TCRNSVSWTVLAKLYLREDKPS 142

Query: 169 LAVDLFNQMVKSDVEIDSLSLATAIAACGMLKSLKEGRNVHRISKSCALESDVLVS 2
           LA+DLF QMV+   +ID+++LATAI ACG LK L  GRN+H +++   LE ++LVS
Sbjct: 143 LALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVS 198



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
 Frame = -3

Query: 553 DKMPDSKHTFAWNTLIQTHLRNGEFDSAVTTYSQMLLDG-VTPDHHTLPRILSVSRLLRN 377
           D+MP SK   +W  LI  +++ G  + A   + QM +DG + PD  T+  IL     +  
Sbjct: 219 DQMP-SKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAA 277

Query: 376 LHFGKQLHGQALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLAR 197
              GK++HG  +K        V +AL+++Y      ++A   F      ++ VSW+++  
Sbjct: 278 HKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK-EKDMVSWSIMTL 336

Query: 196 FYLKEDKPNLAVDLFNQMVKS-DVEIDSLSLATAIAACGMLKSLKEG 59
            Y    +  L V LF +M K+  +  D ++    + AC     + EG
Sbjct: 337 GYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEG 383


>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 629

 Score =  202 bits (515), Expect = 2e-50
 Identities = 102/176 (57%), Positives = 128/176 (72%)
 Frame = -3

Query: 529 TFAWNTLIQTHLRNGEFDSAVTTYSQMLLDGVTPDHHTLPRILSVSRLLRNLHFGKQLHG 350
           TFAWN LIQTHL NG+    ++TY QML  GV PD HTLPRI+  +R   +L  GKQLH 
Sbjct: 24  TFAWNNLIQTHLTNGDLGHVISTYRQMLFRGVRPDKHTLPRIICATRQYGDLQVGKQLHA 83

Query: 349 QALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLARFYLKEDKPN 170
           QA K G SS  YV ++LIELYG L  A+ AKWL DKS   RN+VSWT+LA+ YL+EDKP+
Sbjct: 84  QAFKLGFSSNLYVLTSLIELYGILDSADTAKWLHDKS-TCRNSVSWTVLAKLYLREDKPS 142

Query: 169 LAVDLFNQMVKSDVEIDSLSLATAIAACGMLKSLKEGRNVHRISKSCALESDVLVS 2
           LA+DLF QMV+   +ID+++LATAI ACG LK L  GRN+H +++   LE ++LVS
Sbjct: 143 LALDLFYQMVELADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVS 198



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
 Frame = -3

Query: 553 DKMPDSKHTFAWNTLIQTHLRNGEFDSAVTTYSQMLLDG-VTPDHHTLPRILSVSRLLRN 377
           D+MP SK   +W  LI  +++ G  + A   + QM +DG + PD  T+  IL     +  
Sbjct: 219 DQMP-SKDIISWTELIHMYVKKGGINEAFKLFRQMNMDGELKPDPRTISSILPACGRMAA 277

Query: 376 LHFGKQLHGQALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLAR 197
              GK++HG  +K        V +AL+++Y      ++A   F      ++ VSW+++  
Sbjct: 278 HKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQSASKTFSMMK-EKDMVSWSIMTL 336

Query: 196 FYLKEDKPNLAVDLFNQMVKS-DVEIDSLSLATAIAACGMLKSLKEG 59
            Y    +  L V LF +M K+  +  D ++    + AC     + EG
Sbjct: 337 GYSLHGQGKLGVSLFREMEKNFKMRRDEITYTAVLHACTTANMVDEG 383


>ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|222841170|gb|EEE78717.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score =  199 bits (507), Expect = 2e-49
 Identities = 99/185 (53%), Positives = 133/185 (71%)
 Frame = -3

Query: 556 LDKMPDSKHTFAWNTLIQTHLRNGEFDSAVTTYSQMLLDGVTPDHHTLPRILSVSRLLRN 377
           LD++P S  TFAWN LI THL N +   A++ Y  M++ G  PD  TLPR+L+ SR+  +
Sbjct: 51  LDEIPLSD-TFAWNNLIHTHLSNRDPGGALSIYHHMMMRGACPDRRTLPRVLTASRICGD 109

Query: 376 LHFGKQLHGQALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLAR 197
           L  GKQLHGQA+K G    HYV +ALIE+YG L G EA KWLFDKSP  RN+V+WT++ +
Sbjct: 110 LFLGKQLHGQAIKLGFFDEHYVITALIEIYGRLDGIEAGKWLFDKSP-RRNSVAWTMILK 168

Query: 196 FYLKEDKPNLAVDLFNQMVKSDVEIDSLSLATAIAACGMLKSLKEGRNVHRISKSCALES 17
            YL E+KP+LA+++F QMV+ +  IDS+ L TA  ACG+LKS++ GR VH +++   LES
Sbjct: 169 LYLMENKPDLAINVFYQMVELNARIDSVVLITAAGACGLLKSVEHGRRVHDVARKFRLES 228

Query: 16  DVLVS 2
           D+LVS
Sbjct: 229 DILVS 233



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/183 (25%), Positives = 97/183 (53%)
 Frame = -3

Query: 553 DKMPDSKHTFAWNTLIQTHLRNGEFDSAVTTYSQMLLDGVTPDHHTLPRILSVSRLLRNL 374
           DK P  +++ AW  +++ +L   + D A+  + QM+      D   L        LL+++
Sbjct: 153 DKSP-RRNSVAWTMILKLYLMENKPDLAINVFYQMVELNARIDSVVLITAAGACGLLKSV 211

Query: 373 HFGKQLHGQALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLARF 194
             G+++H  A KF L S   V ++L+++       E A+  F++   +++ +SWT +   
Sbjct: 212 EHGRRVHDVARKFRLESDILVSNSLLKMQIDCQRMEDARGFFNQM-TTKDVISWTEIICG 270

Query: 193 YLKEDKPNLAVDLFNQMVKSDVEIDSLSLATAIAACGMLKSLKEGRNVHRISKSCALESD 14
           Y+K+ + N A+ LF +M    ++ DSLS+++ + AC    + K G+ +H  S    ++++
Sbjct: 271 YVKKGEFNEALKLFRKMNMDGIKPDSLSVSSVLPACARTVAHKNGKEIHGYSLRNGMDNN 330

Query: 13  VLV 5
           ++V
Sbjct: 331 LIV 333



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 42/162 (25%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
 Frame = -3

Query: 538 SKHTFAWNTLIQTHLRNGEFDSAVTTYSQMLLDGVTPDHHTLPRILSVSRLLRNLHFGKQ 359
           +K   +W  +I  +++ GEF+ A+  + +M +DG+ PD  ++  +L           GK+
Sbjct: 258 TKDVISWTEIICGYVKKGEFNEALKLFRKMNMDGIKPDSLSVSSVLPACARTVAHKNGKE 317

Query: 358 LHGQALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLARFYLKED 179
           +HG +L+ G+ +   V +A  ++Y      + A  +F++    R+ +SWT++   +    
Sbjct: 318 IHGYSLRNGMDNNLIVQNATTDMYAKSGLVDYALKVFERMK-KRDVISWTVMILGFSLHG 376

Query: 178 KPNLAVDLFNQMVKSD-VEIDSLSLATAIAACGMLKSLKEGR 56
           K  L V+LF +M K   VE D  + A  +  C     ++EG+
Sbjct: 377 KGELGVELFCRMEKDQRVEADQFTYAAVLHCCTAACMVEEGK 418


>emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score =  196 bits (497), Expect = 3e-48
 Identities = 103/165 (62%), Positives = 124/165 (75%)
 Frame = -3

Query: 553 DKMPDSKHTFAWNTLIQTHLRNGEFDSAVTTYSQMLLDGVTPDHHTLPRILSVSRLLRNL 374
           D++P S +TFAWN LIQTHL NG+    V+TY QMLL GV PD HT+PRIL+ +R   + 
Sbjct: 146 DEIPVS-NTFAWNNLIQTHLTNGDSGRVVSTYRQMLLRGVRPDKHTIPRILTAARHTSSF 204

Query: 373 HFGKQLHGQALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLARF 194
            FGKQ+HG ALK GLSS  YV SAL+E+YG L GA+AAK +F KS   RN+VSWTL++R 
Sbjct: 205 SFGKQVHGHALKLGLSSESYVISALLEMYGRLDGABAAKLVFCKS-ARRNSVSWTLISRL 263

Query: 193 YLKEDKPNLAVDLFNQMVKSDVEIDSLSLATAIAACGMLKSLKEG 59
           Y+ EDKP LAVD+F QMV+S  EID L+L TAI ACGMLKSL  G
Sbjct: 264 YIMEDKPGLAVDMFKQMVESKSEIDPLALVTAIVACGMLKSLPGG 308



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 1/167 (0%)
 Frame = -3

Query: 553 DKMPDSKHTFAWNTLIQTHLRNGEFDSAVTTYSQMLLDGVTPDHHTLPRILSVSRLLRNL 374
           D+MP SK   +W  + + +++NG F+  +  + QM ++GV PD   +  IL         
Sbjct: 325 DRMP-SKDVISWTEIFRGYVKNGGFNEGLKLFRQMSMEGVKPDSLAISSILPACGRGAAH 383

Query: 373 HFGKQLHGQALKFGLSSTHYVHSALIELYGTLVGAEAAKWLFDKSPVSRNTVSWTLLARF 194
             GK++H   L+ G+     V +A++++Y      E+A  +F      R+ +SWT++   
Sbjct: 384 KQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESAAKIF-AGMKDRDAISWTVMILG 442

Query: 193 YLKEDKPNLAVDLFNQMVK-SDVEIDSLSLATAIAACGMLKSLKEGR 56
           Y    +  L VDLF +M K S VEID ++ A A+ AC   + +++GR
Sbjct: 443 YSLHGQGELGVDLFRKMEKNSSVEIDQIAYAAALHACTTARLVEQGR 489