BLASTX nr result

ID: Bupleurum21_contig00020084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020084
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   328   1e-87
ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm...   314   2e-83
ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homo...   305   1e-80
ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homo...   305   1e-80
ref|XP_003598665.1| Integrator complex subunit [Medicago truncat...   299   4e-79

>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
            gi|296081277|emb|CBI17721.3| unnamed protein product
            [Vitis vinifera]
          Length = 774

 Score =  328 bits (840), Expect = 1e-87
 Identities = 165/267 (61%), Positives = 204/267 (76%), Gaps = 1/267 (0%)
 Frame = +3

Query: 6    AGGSVVIPIGRVGIILQILEQISDFLESSNIKAPIFMISSVAEELLAYANIIPEWLCKQR 185
            AGGSV+IPIGR+GIILQ+LE IS  LE+S++K PIF+ISSVAEELLA+ NIIPEWLCKQR
Sbjct: 423  AGGSVLIPIGRLGIILQLLELISLSLEASSLKVPIFIISSVAEELLAFTNIIPEWLCKQR 482

Query: 186  QERMYSGDSLFGHVALLKDRRLQIFPAVHSLELLKSWEEPCIVFCPHWSMRLGPVVHLLQ 365
            QE+++SG+  F H  L+K+++L +FPAVHS  LLK W+EPCI F PHWS+RLGPVVHLL+
Sbjct: 483  QEKLFSGEPFFAHTQLIKEKKLHVFPAVHSPNLLKIWQEPCIAFSPHWSLRLGPVVHLLR 542

Query: 366  RWCGDPNSLLIMENSEYADLALLPFKPLTIKVLQCSFLSGIKLQKVQPLLDILQPKVVLF 545
            RW GD NSLLIME    ADLALLPFKP+ +KVLQCSFLSGIKLQKVQPLL ILQPK VLF
Sbjct: 543  RWSGDENSLLIMEEGVDADLALLPFKPMAMKVLQCSFLSGIKLQKVQPLLKILQPKFVLF 602

Query: 546  PEDSRKFIPAFNT-AISINYFSEKETLCIPKLNAASELDIATDLTLQIHWKKVNECGTSI 722
            PED R+ +   +T + +  Y+ E ETL +P L  +SEL+IA DL   IH +++      I
Sbjct: 603  PEDLRQLVSYSDTNSHAFFYYCENETLPVPSLKNSSELEIAADLVSLIHCRRLTAESIGI 662

Query: 723  ATLKGQLLLEHGKQRLIIQNDQVVSTQ 803
              LKG   + HGK +L   ++Q  S+Q
Sbjct: 663  GRLKGDFSVTHGKHQLHSGSEQADSSQ 689


>ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
            gi|223540437|gb|EEF42006.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 705

 Score =  314 bits (804), Expect = 2e-83
 Identities = 155/269 (57%), Positives = 206/269 (76%), Gaps = 3/269 (1%)
 Frame = +3

Query: 6    AGGSVVIPIGRVGIILQILEQISDFLESSNIKAPIFMISSVAEELLAYANIIPEWLCKQR 185
            AGGSV++P+ R+GII+Q+LEQIS FLESS IK PI++ISSVA ELLA+ NIIPEWLCK R
Sbjct: 353  AGGSVLVPLNRLGIIMQLLEQISIFLESSAIKVPIYVISSVAAELLAFTNIIPEWLCKFR 412

Query: 186  QERMYSGDSLFGHVALLKDRRLQIFPAVHSLELLKSWEEPCIVFCPHWSMRLGPVVHLLQ 365
            QE+++SG+ LF HV L+KD++L +FPAVHS  L+ +W+EPCIVF  HW++RLGPVV LL+
Sbjct: 413  QEKLFSGEPLFSHVELMKDKKLHVFPAVHSPNLITNWQEPCIVFASHWNLRLGPVVPLLR 472

Query: 366  RWCGDPNSLLIMENSEYADLALLPFKPLTIKVLQCSFLSGIKLQKVQPLLDILQPKVVLF 545
            RW  D NSLL++E+   AD+ALLPFKP+ +KVLQCSFLSGI+ QK+QPLL IL PKVVLF
Sbjct: 473  RWRRDENSLLVLEDGLDADMALLPFKPIAMKVLQCSFLSGIRTQKIQPLLKILHPKVVLF 532

Query: 546  PEDSRKFIPAFNTA---ISINYFSEKETLCIPKLNAASELDIATDLTLQIHWKKVNECGT 716
            PED ++ I A +++    S+ Y++E ET  I  L  +S+++IATDL  +  WKK+    T
Sbjct: 533  PEDLKQHINASSSSSHPFSVLYYTENETQEIQSLKDSSDVEIATDLATRFCWKKLKRKDT 592

Query: 717  SIATLKGQLLLEHGKQRLIIQNDQVVSTQ 803
             I  L+G+LL++  K RL+      VS+Q
Sbjct: 593  DITRLEGELLIDDSKHRLVSGKKVSVSSQ 621


>ref|XP_004167262.1| PREDICTED: integrator complex subunit 9 homolog, partial [Cucumis
            sativus]
          Length = 680

 Score =  305 bits (780), Expect = 1e-80
 Identities = 143/266 (53%), Positives = 202/266 (75%)
 Frame = +3

Query: 6    AGGSVVIPIGRVGIILQILEQISDFLESSNIKAPIFMISSVAEELLAYANIIPEWLCKQR 185
            +GGSV+IPI R+G+ LQ+LEQIS  L+ S++K PI+ ISSVAEELL +AN IPEWLC+QR
Sbjct: 332  SGGSVLIPINRLGVNLQLLEQISASLDYSDLKVPIYFISSVAEELLTFANAIPEWLCRQR 391

Query: 186  QERMYSGDSLFGHVALLKDRRLQIFPAVHSLELLKSWEEPCIVFCPHWSMRLGPVVHLLQ 365
            Q +++SG+ +F  V LLK+ +L + PA+HS +LL +W+EPCIVFCPHWS+RLGPVVHLL+
Sbjct: 392  QHKLFSGEPMFTFVELLKENKLHVVPAIHSPKLLINWQEPCIVFCPHWSLRLGPVVHLLR 451

Query: 366  RWCGDPNSLLIMENSEYADLALLPFKPLTIKVLQCSFLSGIKLQKVQPLLDILQPKVVLF 545
            RWCGDP+SLL++E     +L+LLPFKP+++KVLQCSF SGIK +KV+PLL +LQPK+V+ 
Sbjct: 452  RWCGDPSSLLVLEKGLDVELSLLPFKPMSMKVLQCSFQSGIKQEKVRPLLKVLQPKIVVL 511

Query: 546  PEDSRKFIPAFNTAISINYFSEKETLCIPKLNAASELDIATDLTLQIHWKKVNECGTSIA 725
            PE+  + I     + ++  +SE ++L +P L  +SEL+IA+D  +   W+K+++   +I 
Sbjct: 512  PENLSRLINTNTESFTVFTYSEGKSLHVPNLKDSSELEIASDSAMSFCWRKLHQGNINIT 571

Query: 726  TLKGQLLLEHGKQRLIIQNDQVVSTQ 803
             LKG+L L  GK +L  +N QV   Q
Sbjct: 572  RLKGELSLNCGKFKLFSENTQVAMYQ 597


>ref|XP_004146463.1| PREDICTED: integrator complex subunit 9 homolog [Cucumis sativus]
          Length = 693

 Score =  305 bits (780), Expect = 1e-80
 Identities = 143/266 (53%), Positives = 202/266 (75%)
 Frame = +3

Query: 6    AGGSVVIPIGRVGIILQILEQISDFLESSNIKAPIFMISSVAEELLAYANIIPEWLCKQR 185
            +GGSV+IPI R+G+ LQ+LEQIS  L+ S++K PI+ ISSVAEELL +AN IPEWLC+QR
Sbjct: 345  SGGSVLIPINRLGVNLQLLEQISASLDYSDLKVPIYFISSVAEELLTFANAIPEWLCRQR 404

Query: 186  QERMYSGDSLFGHVALLKDRRLQIFPAVHSLELLKSWEEPCIVFCPHWSMRLGPVVHLLQ 365
            Q +++SG+ +F  V LLK+ +L + PA+HS +LL +W+EPCIVFCPHWS+RLGPVVHLL+
Sbjct: 405  QHKLFSGEPMFTFVELLKENKLHVVPAIHSPKLLINWQEPCIVFCPHWSLRLGPVVHLLR 464

Query: 366  RWCGDPNSLLIMENSEYADLALLPFKPLTIKVLQCSFLSGIKLQKVQPLLDILQPKVVLF 545
            RWCGDP+SLL++E     +L+LLPFKP+++KVLQCSF SGIK +KV+PLL +LQPK+V+ 
Sbjct: 465  RWCGDPSSLLVLEKGLDVELSLLPFKPMSMKVLQCSFQSGIKQEKVRPLLKVLQPKIVVL 524

Query: 546  PEDSRKFIPAFNTAISINYFSEKETLCIPKLNAASELDIATDLTLQIHWKKVNECGTSIA 725
            PE+  + I     + ++  +SE ++L +P L  +SEL+IA+D  +   W+K+++   +I 
Sbjct: 525  PENLSRLINTNTESFTVFTYSEGKSLHVPNLKDSSELEIASDSAMSFCWRKLHQGNINIT 584

Query: 726  TLKGQLLLEHGKQRLIIQNDQVVSTQ 803
             LKG+L L  GK +L  +N QV   Q
Sbjct: 585  RLKGELSLNCGKFKLFSENTQVAMYQ 610


>ref|XP_003598665.1| Integrator complex subunit [Medicago truncatula]
            gi|355487713|gb|AES68916.1| Integrator complex subunit
            [Medicago truncatula]
          Length = 536

 Score =  299 bits (766), Expect = 4e-79
 Identities = 150/296 (50%), Positives = 206/296 (69%), Gaps = 33/296 (11%)
 Frame = +3

Query: 9    GGSVVIPIGRVGIILQILEQISDFLESSNIKAPIFMISSVAEELLAYANIIPEWLCKQRQ 188
            GGSV+IPI R+G ILQ+LE+++  LE+S ++ PI++ISSVAEELLA  NIIPEWL KQRQ
Sbjct: 153  GGSVLIPINRLGTILQLLEEMATLLEASAMEVPIYIISSVAEELLALLNIIPEWLSKQRQ 212

Query: 189  ERMYSGDSLFGHVALLKDRRLQIFPAVHSLELLKSWEEPCIVFCPHWSMRLGPVVHLLQR 368
            ER+++G+ LF HV LLK++++++ P +HS +LLK W+EPCIVFCPHWS+R+GP+VHLL+R
Sbjct: 213  ERLFAGEPLFDHVKLLKEKKIRVVPNIHSHQLLKDWQEPCIVFCPHWSLRMGPIVHLLRR 272

Query: 369  WCGDPNSLLIMENSEYADLALLPFKPLTIKVLQCSFLSGIKLQKVQPLLDILQPKVVLFP 548
            WCGDP SLLI+E+    +LALLPFKP+ +KVLQC F SGI LQK+QPLL  LQPK +LFP
Sbjct: 273  WCGDPKSLLILEDMVNPELALLPFKPVEMKVLQCLFPSGIGLQKLQPLLKTLQPKTILFP 332

Query: 549  EDSR-KFIPAFNTAISINYFSEKETLCIP--------KLN-------------------- 641
            ED R K   +   + S++Y++E ETL +P        K++                    
Sbjct: 333  EDLRLKMCFSCEKSFSVSYYTEAETLKVPCQKESSELKMSFSCEKSFSVSYCTEPETLKV 392

Query: 642  ----AASELDIATDLTLQIHWKKVNECGTSIATLKGQLLLEHGKQRLIIQNDQVVS 797
                 +SEL I  DL  Q +WK   + G ++  LKG+LL+E+G+  L++ ND+  S
Sbjct: 393  FCQKESSELKIEADLASQFYWKTFKKEGINVTKLKGKLLMENGRHHLLLDNDKKTS 448


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