BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020067
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310852.1| predicted protein [Populus trichocarpa] gi|1...    89   5e-31
ref|XP_002327670.1| gdp-mannose 4,6-dehydratase [Populus trichoc...    87   1e-30
ref|XP_002866761.1| predicted protein [Arabidopsis lyrata subsp....    91   6e-29
pdb|1N7G|A Chain A, Crystal Structure Of The Gdp-mannose 4,6-deh...    91   1e-28
ref|XP_002877790.1| GDP-mannose 4,6 dehydratase [Arabidopsis lyr...    91   1e-28

>ref|XP_002310852.1| predicted protein [Populus trichocarpa] gi|118486218|gb|ABK94951.1|
           unknown [Populus trichocarpa]
           gi|222853755|gb|EEE91302.1| predicted protein [Populus
           trichocarpa]
          Length = 368

 Score = 89.0 bits (219), Expect(2) = 5e-31
 Identities = 41/44 (93%), Positives = 42/44 (95%)
 Frame = -1

Query: 134 RRSSNFNTQRINHIYIDPHNAQKALMKLHYADLTDASSLRRWLD 3
           RRSSNFNTQRINHIYIDPHNA KA MKLHYADL+DASSLRRWLD
Sbjct: 54  RRSSNFNTQRINHIYIDPHNAHKARMKLHYADLSDASSLRRWLD 97



 Score = 70.5 bits (171), Expect(2) = 5e-31
 Identities = 34/43 (79%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
 Frame = -3

Query: 333 SETTAP-NGESRPKVALITGITGQDGSYLTEFLLKKGYQVHGL 208
           S++T P NGE  PK+ALITGITGQDGSYLTEFLL KGY+VHGL
Sbjct: 10  SDSTIPVNGEITPKIALITGITGQDGSYLTEFLLNKGYEVHGL 52


>ref|XP_002327670.1| gdp-mannose 4,6-dehydratase [Populus trichocarpa]
           gi|118485706|gb|ABK94703.1| unknown [Populus
           trichocarpa] gi|222836755|gb|EEE75148.1| gdp-mannose
           4,6-dehydratase [Populus trichocarpa]
          Length = 368

 Score = 87.4 bits (215), Expect(2) = 1e-30
 Identities = 40/44 (90%), Positives = 41/44 (93%)
 Frame = -1

Query: 134 RRSSNFNTQRINHIYIDPHNAQKALMKLHYADLTDASSLRRWLD 3
           RRSSNFNTQRINHIYIDPHN  KA MKLHYADL+DASSLRRWLD
Sbjct: 54  RRSSNFNTQRINHIYIDPHNVHKARMKLHYADLSDASSLRRWLD 97



 Score = 70.9 bits (172), Expect(2) = 1e-30
 Identities = 35/52 (67%), Positives = 40/52 (76%), Gaps = 8/52 (15%)
 Frame = -3

Query: 339 MASETTAP--------NGESRPKVALITGITGQDGSYLTEFLLKKGYQVHGL 208
           MASE+  P        NGE +PK+AL+TGITGQDGSYLTEFLL KGY+VHGL
Sbjct: 1   MASESDQPRSASATPVNGEIKPKIALVTGITGQDGSYLTEFLLNKGYEVHGL 52


>ref|XP_002866761.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312596|gb|EFH43020.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score = 90.9 bits (224), Expect(2) = 6e-29
 Identities = 41/44 (93%), Positives = 43/44 (97%)
 Frame = -1

Query: 134 RRSSNFNTQRINHIYIDPHNAQKALMKLHYADLTDASSLRRWLD 3
           RRSSNFNTQRINHIY+DPHNA KALMKLHYADL+DASSLRRWLD
Sbjct: 53  RRSSNFNTQRINHIYVDPHNANKALMKLHYADLSDASSLRRWLD 96



 Score = 61.6 bits (148), Expect(2) = 6e-29
 Identities = 34/50 (68%), Positives = 41/50 (82%), Gaps = 5/50 (10%)
 Frame = -3

Query: 342 SMASETTAP-NGES---RP-KVALITGITGQDGSYLTEFLLKKGYQVHGL 208
           +MAS+ +   NG S   +P K+AL+TGITGQDGSYLTEFLL+KGYQVHGL
Sbjct: 2   AMASQVSRSLNGHSDIPQPRKIALVTGITGQDGSYLTEFLLEKGYQVHGL 51


>pdb|1N7G|A Chain A, Crystal Structure Of The Gdp-mannose 4,6-dehydratase
           Ternary Complex With Nadph And Gdp-rhamnose.
           gi|28373939|pdb|1N7G|B Chain B, Crystal Structure Of The
           Gdp-mannose 4,6-dehydratase Ternary Complex With Nadph
           And Gdp-rhamnose. gi|28373940|pdb|1N7G|C Chain C,
           Crystal Structure Of The Gdp-mannose 4,6-dehydratase
           Ternary Complex With Nadph And Gdp-rhamnose.
           gi|28373941|pdb|1N7G|D Chain D, Crystal Structure Of The
           Gdp-mannose 4,6-dehydratase Ternary Complex With Nadph
           And Gdp-rhamnose. gi|28373942|pdb|1N7H|A Chain A,
           Crystal Structure Of Gdp-Mannose 4,6-Dehydratase Ternary
           Complex With Nadph And Gdp gi|28373943|pdb|1N7H|B Chain
           B, Crystal Structure Of Gdp-Mannose 4,6-Dehydratase
           Ternary Complex With Nadph And Gdp
          Length = 381

 Score = 90.5 bits (223), Expect(2) = 1e-28
 Identities = 41/44 (93%), Positives = 42/44 (95%)
 Frame = -1

Query: 134 RRSSNFNTQRINHIYIDPHNAQKALMKLHYADLTDASSLRRWLD 3
           RRSSNFNTQRINHIYIDPHN  KALMKLHYADLTDASSLRRW+D
Sbjct: 60  RRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWID 103



 Score = 61.2 bits (147), Expect(2) = 1e-28
 Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
 Frame = -3

Query: 342 SMASETTAPNGESRP----KVALITGITGQDGSYLTEFLLKKGYQVHGL 208
           S +   TAP  +S      K+ALITGITGQDGSYLTEFLL KGY+VHGL
Sbjct: 10  SDSESITAPKADSTVVEPRKIALITGITGQDGSYLTEFLLGKGYEVHGL 58


>ref|XP_002877790.1| GDP-mannose 4,6 dehydratase [Arabidopsis lyrata subsp. lyrata]
           gi|297323628|gb|EFH54049.1| GDP-mannose 4,6 dehydratase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 376

 Score = 90.5 bits (223), Expect(2) = 1e-28
 Identities = 41/44 (93%), Positives = 42/44 (95%)
 Frame = -1

Query: 134 RRSSNFNTQRINHIYIDPHNAQKALMKLHYADLTDASSLRRWLD 3
           RRSSNFNTQR+NHIYIDPHN  KALMKLHYADLTDASSLRRWLD
Sbjct: 63  RRSSNFNTQRLNHIYIDPHNVNKALMKLHYADLTDASSLRRWLD 106



 Score = 61.2 bits (147), Expect(2) = 1e-28
 Identities = 34/61 (55%), Positives = 36/61 (59%), Gaps = 17/61 (27%)
 Frame = -3

Query: 339 MASETTAPNGESRP-----------------KVALITGITGQDGSYLTEFLLKKGYQVHG 211
           MASE   P  ES                   K+ALITGITGQDGSYLTEFLL KGY+VHG
Sbjct: 1   MASENNGPRSESESITKADSTVVEMPPSQPRKIALITGITGQDGSYLTEFLLGKGYEVHG 60

Query: 210 L 208
           L
Sbjct: 61  L 61