BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020062
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]        59   3e-07
gb|ABI34312.1| RNA-directed RNA polymerase, putative [Solanum de...    59   3e-07
gb|ABI34379.1| RNA-directed RNA polymerase-like, putative [Solan...    59   3e-07
gb|ABI34338.1| RNA-directed RNA polymerase-like, putative [Solan...    59   3e-07
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de...    59   4e-07

>gb|AAS78669.1| RdRp1m truncated protein [Nicotiana benthamiana]
          Length = 479

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = +1

Query: 79  MGKTIHVSGFRSLVPAEDLKAFFENFTGKETVDAIEVKESKKKGNAPYARIQFVTSQSTE 258
           MGKTI V GF  L+ AE +K F EN TG  TV A+EVK+S K G   +AR+QF +++S E
Sbjct: 1   MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQS-KGGRRSFARVQFASNKSAE 59


>gb|ABI34312.1| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 241

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +1

Query: 64  ISLGCMGKTIHVSGFRSLVPAEDLKAFFENFTGKETVDAIEVKESKKKGNAPYARIQFVT 243
           +  G MGKTI V GF  L+PAE +K+F E  TG  TV A++VK+S K G+  +A++QFV 
Sbjct: 61  LEFGYMGKTIQVYGFPDLLPAEVVKSFLEKHTGYGTVCALDVKQS-KGGSRAFAKVQFVD 119

Query: 244 SQSTER 261
           + S ++
Sbjct: 120 NISADK 125


>gb|ABI34379.1| RNA-directed RNA polymerase-like, putative [Solanum tuberosum]
          Length = 274

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +1

Query: 64  ISLGCMGKTIHVSGFRSLVPAEDLKAFFENFTGKETVDAIEVKESKKKGNAPYARIQFVT 243
           +  G MGKTI V GF  L+PAE +K+F E  TG  TV A++VK+S K G+  +A++QFV 
Sbjct: 81  LEFGYMGKTIQVYGFPDLLPAEVVKSFLEKHTGYGTVCALDVKQS-KGGSRAFAKVQFVD 139

Query: 244 SQSTER 261
           + S ++
Sbjct: 140 NISADK 145


>gb|ABI34338.1| RNA-directed RNA polymerase-like, putative [Solanum demissum]
          Length = 215

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +1

Query: 64  ISLGCMGKTIHVSGFRSLVPAEDLKAFFENFTGKETVDAIEVKESKKKGNAPYARIQFVT 243
           +  G MGKTI V GF  L+PAE +K+F E  TG  TV A++VK+S K G+  +A++QFV 
Sbjct: 22  LEFGYMGKTIQVYGFPDLLPAEVVKSFLEKHTGYGTVCALDVKQS-KGGSRAFAKVQFVD 80

Query: 244 SQSTER 261
           + S ++
Sbjct: 81  NISADK 86


>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
          Length = 1139

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/66 (46%), Positives = 45/66 (68%)
 Frame = +1

Query: 64  ISLGCMGKTIHVSGFRSLVPAEDLKAFFENFTGKETVDAIEVKESKKKGNAPYARIQFVT 243
           +  G MGKTI V GF  L+ AE +K+F E  TG  TV A+EVK+S K+G+  +A++QFV 
Sbjct: 22  LEFGYMGKTIQVYGFPDLLSAEVVKSFLEKHTGYGTVCALEVKQS-KRGSRAFAKVQFVD 80

Query: 244 SQSTER 261
           + S ++
Sbjct: 81  NISADK 86