BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020056
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_569047.1| F-box protein SKIP2 [Arabidopsis thaliana] gi|7...   191   5e-47
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...   191   5e-47
dbj|BAE98487.1| hypothetical protein [Arabidopsis thaliana]           191   5e-47
ref|XP_002865015.1| hypothetical protein ARALYDRAFT_919984 [Arab...   191   7e-47
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...   189   2e-46

>ref|NP_569047.1| F-box protein SKIP2 [Arabidopsis thaliana]
           gi|75272932|sp|Q9FE83.1|SKIP2_ARATH RecName: Full=F-box
           protein SKIP2; AltName: Full=SKP1-interacting partner 2
           gi|10177612|dbj|BAB10959.1| unnamed protein product
           [Arabidopsis thaliana] gi|10716949|gb|AAG21977.1| SKP1
           interacting partner 2 [Arabidopsis thaliana]
           gi|27311735|gb|AAO00833.1| SKP1 interacting partner 2
           (SKIP2) [Arabidopsis thaliana]
           gi|31711938|gb|AAP68325.1| At5g67250 [Arabidopsis
           thaliana] gi|332010937|gb|AED98320.1| F-box protein
           SKIP2 [Arabidopsis thaliana]
          Length = 527

 Score =  191 bits (485), Expect = 5e-47
 Identities = 89/131 (67%), Positives = 106/131 (80%)
 Frame = -2

Query: 393 KLHIDGWRTNRIGEQGLMSIGKHSANLQELVLIGVNPSLKSLEAIASGCQKLERLALCGS 214
           KLHIDGWRTNRIG++GL+S+ KH  NLQELVLIGVN +  SL AIAS C+KLERLALCGS
Sbjct: 317 KLHIDGWRTNRIGDEGLLSVAKHCLNLQELVLIGVNATHMSLAAIASNCEKLERLALCGS 376

Query: 213 ETVADAELSCIATKCAALKKVCIKSCPVSDKGIEAFIKGCPNLMKIKVKKCSAITSEVED 34
            T+ D E++CIA KC AL+K CIK CPVSD+GIEA   GCPNL+K+KVKKC  +T E+ D
Sbjct: 377 GTIGDTEIACIARKCGALRKFCIKGCPVSDRGIEALAVGCPNLVKLKVKKCKVVTGEIGD 436

Query: 33  LLRLSRRSLIV 1
            LR  RR+L+V
Sbjct: 437 WLREQRRTLVV 447


>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
           gi|222842891|gb|EEE80438.1| f-box family protein
           [Populus trichocarpa]
          Length = 533

 Score =  191 bits (485), Expect = 5e-47
 Identities = 90/131 (68%), Positives = 106/131 (80%)
 Frame = -2

Query: 393 KLHIDGWRTNRIGEQGLMSIGKHSANLQELVLIGVNPSLKSLEAIASGCQKLERLALCGS 214
           KLHIDGW+ +RIG+ GLM++ K+  NLQELVLIGVNP+  SLE +AS CQ LERLALCGS
Sbjct: 325 KLHIDGWKAHRIGDDGLMAVAKYCLNLQELVLIGVNPTQISLELLASNCQNLERLALCGS 384

Query: 213 ETVADAELSCIATKCAALKKVCIKSCPVSDKGIEAFIKGCPNLMKIKVKKCSAITSEVED 34
           +TV D E+SCIA KC ALKK+CIKSCPVSD G+EA   GCPNL+K+KVKKC A+T E  D
Sbjct: 385 DTVGDVEISCIAAKCVALKKLCIKSCPVSDHGLEALANGCPNLVKVKVKKCRAVTYECAD 444

Query: 33  LLRLSRRSLIV 1
           LLR+ R SL V
Sbjct: 445 LLRMKRGSLAV 455


>dbj|BAE98487.1| hypothetical protein [Arabidopsis thaliana]
          Length = 527

 Score =  191 bits (485), Expect = 5e-47
 Identities = 89/131 (67%), Positives = 106/131 (80%)
 Frame = -2

Query: 393 KLHIDGWRTNRIGEQGLMSIGKHSANLQELVLIGVNPSLKSLEAIASGCQKLERLALCGS 214
           KLHIDGWRTNRIG++GL+S+ KH  NLQELVLIGVN +  SL AIAS C+KLERLALCGS
Sbjct: 317 KLHIDGWRTNRIGDEGLLSVAKHCLNLQELVLIGVNATHMSLAAIASNCEKLERLALCGS 376

Query: 213 ETVADAELSCIATKCAALKKVCIKSCPVSDKGIEAFIKGCPNLMKIKVKKCSAITSEVED 34
            T+ D E++CIA KC AL+K CIK CPVSD+GIEA   GCPNL+K+KVKKC  +T E+ D
Sbjct: 377 GTIGDTEIACIARKCGALRKFCIKGCPVSDRGIEALAVGCPNLVKLKVKKCKVVTGEIGD 436

Query: 33  LLRLSRRSLIV 1
            LR  RR+L+V
Sbjct: 437 WLREQRRTLVV 447


>ref|XP_002865015.1| hypothetical protein ARALYDRAFT_919984 [Arabidopsis lyrata subsp.
           lyrata] gi|297310850|gb|EFH41274.1| hypothetical protein
           ARALYDRAFT_919984 [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score =  191 bits (484), Expect = 7e-47
 Identities = 89/131 (67%), Positives = 106/131 (80%)
 Frame = -2

Query: 393 KLHIDGWRTNRIGEQGLMSIGKHSANLQELVLIGVNPSLKSLEAIASGCQKLERLALCGS 214
           KLHIDGWRTNRIG++GL+S+ KH  NLQELVLIGVN +  SL AIAS C+KLERLALCGS
Sbjct: 319 KLHIDGWRTNRIGDEGLISVAKHCLNLQELVLIGVNATHMSLAAIASNCEKLERLALCGS 378

Query: 213 ETVADAELSCIATKCAALKKVCIKSCPVSDKGIEAFIKGCPNLMKIKVKKCSAITSEVED 34
            T+ D E++CIA KC AL+K CIK CPVSD+GIEA   GCPNL+K+KVKKC  +T E+ D
Sbjct: 379 GTIGDTEIACIARKCGALRKFCIKGCPVSDRGIEALAVGCPNLVKLKVKKCKVVTGEIGD 438

Query: 33  LLRLSRRSLIV 1
            LR  RR+L+V
Sbjct: 439 WLREQRRTLVV 449


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
           gi|449515093|ref|XP_004164584.1| PREDICTED: F-box
           protein At1g47056-like [Cucumis sativus]
          Length = 535

 Score =  189 bits (480), Expect = 2e-46
 Identities = 88/131 (67%), Positives = 110/131 (83%)
 Frame = -2

Query: 393 KLHIDGWRTNRIGEQGLMSIGKHSANLQELVLIGVNPSLKSLEAIASGCQKLERLALCGS 214
           KLHIDGW+ NRIG++GL+++ ++ +NLQELVLIGVNP+  SLE +AS C+ LERLALCGS
Sbjct: 325 KLHIDGWKANRIGDEGLVAVARNCSNLQELVLIGVNPTKVSLEILASNCRNLERLALCGS 384

Query: 213 ETVADAELSCIATKCAALKKVCIKSCPVSDKGIEAFIKGCPNLMKIKVKKCSAITSEVED 34
           +TV D+E+SCIA KC ALKK+CIKSCPVSD+G+EA  +GCPNL+K+KVKKC  +T E  D
Sbjct: 385 DTVGDSEISCIAAKCIALKKLCIKSCPVSDQGMEALAEGCPNLVKVKVKKCRGVTPEGAD 444

Query: 33  LLRLSRRSLIV 1
            LRLSR SL V
Sbjct: 445 SLRLSRGSLAV 455