BLASTX nr result

ID: Bupleurum21_contig00020018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020018
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB88750.1| gag protein [Silene latifolia]                        132   1e-28
emb|CAN66195.1| hypothetical protein VITISV_005139 [Vitis vinifera]   117   5e-24
emb|CAN62506.1| hypothetical protein VITISV_010654 [Vitis vinifera]   117   5e-24
emb|CAN77474.1| hypothetical protein VITISV_007258 [Vitis vinifera]   117   6e-24
emb|CAN70509.1| hypothetical protein VITISV_027903 [Vitis vinifera]   116   8e-24

>dbj|BAB88750.1| gag protein [Silene latifolia]
          Length = 196

 Score =  132 bits (332), Expect = 1e-28
 Identities = 73/167 (43%), Positives = 98/167 (58%), Gaps = 7/167 (4%)
 Frame = -3

Query: 1040 PMTDANQVTPNNDSNANRTNNLVTLPTGGMTPSQEQIIEKMVAERLANVE-------ALI 882
            P+ D  Q        A +  +L T+ T G     +Q I    A   A++E       ++I
Sbjct: 29   PVPDYYQAMEAATPMAPQHQDLATMWTEGNIHGSQQFIHNQYAGYNAHLEHQYQEMRSII 88

Query: 881  NRIPGVPPPIKKSLPSSFADSPFVDSIALVDMPKKFVYPTFKGYDGTTDPNDHIASYKQR 702
            NRIPG+P P++++   S+ADSPFVD I+L+ +PK F  PT   YDGTTDP DHI+  KQ+
Sbjct: 89   NRIPGMPIPMERATTDSYADSPFVDQISLITVPKGFSAPTMTLYDGTTDPYDHISYLKQK 148

Query: 701  MFMTAIPRELREACMCKGFGSGLVGPALQWYTHLPNNSISSFAQLTD 561
            M +      L+EACM KGF S L G  LQW+  LPN SISSFA+L +
Sbjct: 149  MMVITAVGALKEACMYKGFDSTLSGATLQWFMSLPNKSISSFAELVN 195


>emb|CAN66195.1| hypothetical protein VITISV_005139 [Vitis vinifera]
          Length = 506

 Score =  117 bits (293), Expect = 5e-24
 Identities = 62/181 (34%), Positives = 97/181 (53%)
 Frame = -3

Query: 821 SPFVDSIALVDMPKKFVYPTFKGYDGTTDPNDHIASYKQRMFMTAIPRELREACMCKGFG 642
           +PF   I   + P+ F+ P F  YDGT+DP DHI  Y+Q M +        +A +CK F 
Sbjct: 4   TPFCSHIIHYEPPRGFLVPKFSTYDGTSDPFDHIMHYRQLMTLDIG----NDALLCKVFP 59

Query: 641 SGLVGPALQWYTHLPNNSISSFAQLTDIFVEQFASSRKLEKLSDDLYRIKQRRGESLRDY 462
           + L G AL W+ HLP NS+ +F  L + FV Q+  S + ++    L  IK +  ESLR++
Sbjct: 60  ASLQGQALSWFHHLPPNSVGNFRDLFEAFVGQYLCSARHKQNISTLQNIKMQDNESLREF 119

Query: 461 VARFNAEKVSITHCNVDTAITAFRKGLMYDSDLYKELTKYPC*TMEDVLAKAWAQIKWEE 282
           V RF    + +  CN+D  +  F++ +   +  ++ L K P  TM+D+  +A      E+
Sbjct: 120 VKRFGQAVLQVEACNMDVVLQIFKRSICPXTPFFESLAKKPPTTMDDLFRRANKYSMLED 179

Query: 281 D 279
           D
Sbjct: 180 D 180


>emb|CAN62506.1| hypothetical protein VITISV_010654 [Vitis vinifera]
          Length = 458

 Score =  117 bits (293), Expect = 5e-24
 Identities = 61/181 (33%), Positives = 98/181 (54%)
 Frame = -3

Query: 821 SPFVDSIALVDMPKKFVYPTFKGYDGTTDPNDHIASYKQRMFMTAIPRELREACMCKGFG 642
           +PF   I   + P+ F+ P F  Y+GT DP DHI  Y+Q M +        +A +CK F 
Sbjct: 4   TPFCSHIIHYEPPRGFLVPKFSTYNGTNDPFDHIMHYRQLMMLDIG----NDALLCKVFP 59

Query: 641 SGLVGPALQWYTHLPNNSISSFAQLTDIFVEQFASSRKLEKLSDDLYRIKQRRGESLRDY 462
           + L G AL W+ HLP NS+ +F  L++ FV Q+  S + ++    L  IK +  ESLR++
Sbjct: 60  ASLQGQALSWFHHLPPNSVGNFRDLSEAFVGQYLCSARHKQNISTLQNIKMQDNESLREF 119

Query: 461 VARFNAEKVSITHCNVDTAITAFRKGLMYDSDLYKELTKYPC*TMEDVLAKAWAQIKWEE 282
           V RF    + +  C++DT +  F++ +   +  ++ L K P  TM+D+  +A      E+
Sbjct: 120 VKRFGQAVLQVEACSMDTVLQIFKRSICPSTPFFESLAKKPHTTMDDLFRRANKYSMLED 179

Query: 281 D 279
           D
Sbjct: 180 D 180


>emb|CAN77474.1| hypothetical protein VITISV_007258 [Vitis vinifera]
          Length = 537

 Score =  117 bits (292), Expect = 6e-24
 Identities = 63/181 (34%), Positives = 97/181 (53%)
 Frame = -3

Query: 821 SPFVDSIALVDMPKKFVYPTFKGYDGTTDPNDHIASYKQRMFMTAIPRELREACMCKGFG 642
           +PF   I   + P+ F+ P F  YDGT DP DHI  Y+Q M +        +A +CK F 
Sbjct: 4   TPFCPHIIHYEPPRGFLVPKFSTYDGTNDPFDHIMHYRQLMTLDIG----NDALLCKVFP 59

Query: 641 SGLVGPALQWYTHLPNNSISSFAQLTDIFVEQFASSRKLEKLSDDLYRIKQRRGESLRDY 462
           + L G AL W+  LP NS+ +F  L++ FV Q+  S + ++    L  IK R  ESLR++
Sbjct: 60  ASLQGQALSWFHRLPPNSVDNFRDLSEAFVGQYLCSARHKQNISTLQNIKMRDNESLREF 119

Query: 461 VARFNAEKVSITHCNVDTAITAFRKGLMYDSDLYKELTKYPC*TMEDVLAKAWAQIKWEE 282
           V RF    + I  C++D  +  F++ +  D+  ++ L K P  TM+D+  +A      E+
Sbjct: 120 VKRFGQAVLQIEACSMDAVLQIFKQSICPDTPFFESLAKKPPTTMDDLFRRANKYSMLED 179

Query: 281 D 279
           D
Sbjct: 180 D 180


>emb|CAN70509.1| hypothetical protein VITISV_027903 [Vitis vinifera]
          Length = 549

 Score =  116 bits (291), Expect = 8e-24
 Identities = 62/180 (34%), Positives = 95/180 (52%)
 Frame = -3

Query: 818 PFVDSIALVDMPKKFVYPTFKGYDGTTDPNDHIASYKQRMFMTAIPRELREACMCKGFGS 639
           PF   I   + P+ F+ P F  YDGT DP DHI  Y+Q M +        +A +CK F +
Sbjct: 5   PFCSHITHYEPPRGFLVPKFSTYDGTNDPFDHIMHYRQLMTLDIG----NDALLCKVFPA 60

Query: 638 GLVGPALQWYTHLPNNSISSFAQLTDIFVEQFASSRKLEKLSDDLYRIKQRRGESLRDYV 459
            L G AL W+  LP NS+ +F  L++ FV Q+  S + ++    L  +K R  ESLR++V
Sbjct: 61  SLQGQALSWFHRLPPNSVDNFRDLSEAFVGQYLCSARHKQNISTLQNVKMRDNESLREFV 120

Query: 458 ARFNAEKVSITHCNVDTAITAFRKGLMYDSDLYKELTKYPC*TMEDVLAKAWAQIKWEED 279
            RF    + I  CN+D  +  F++ +   +  ++ L K P  TM+D+  +A      E+D
Sbjct: 121 KRFGQTVLQIEACNMDAVLQIFKRSICPGTPFFESLAKKPPTTMDDLFRRANKYSMLEDD 180


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