BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020016
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   133   5e-29
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...   118   2e-24
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...   117   4e-24
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   113   4e-23
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...   105   1e-20

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  133 bits (334), Expect = 5e-29
 Identities = 82/249 (32%), Positives = 111/249 (44%), Gaps = 1/249 (0%)
 Frame = +1

Query: 16   WNNLWNLVLPHKMKIFLWRFCRNNIPVRIRLKTKGVSIPILCPFCTG-VEHLLHLFFDCP 192
            W  LW +  P K+  F WR  RN +P R  L  + V  P+ CP C   +E  LH   +C 
Sbjct: 508  WAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECV 567

Query: 193  FAQECWRSAGLIYDMSTVYYAPDWLLGKLEMGTREEAHKISTVLYGIWHWRNKKVWEEKT 372
             A++ W  +GL           DWL             K   V +G+W  RN  VW  + 
Sbjct: 568  AARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRI 627

Query: 373  ISADTAMTNSFGYVKEWQEARARNEVKASVQKSCDKESKRKWTPPVDNTFKVNVDASMFP 552
              +   +   F  ++ W  A   NE  A+        SK  W  P     K+NVD ++FP
Sbjct: 628  WHSQQVVNGCFTMLESWFHA---NETLATAVTVPSYSSK--WQKPDYGWIKINVDGAVFP 682

Query: 553  DALEFTVGMVIRDHKGVFLEGRNLTLPCPSSVFEAECIGVREALSWVMSRQERRVVVETD 732
            D  +  +G V RDH+G F+ G     P  +     E +GVRE LSW+  R   R+VVETD
Sbjct: 683  D--KGAIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETD 740

Query: 733  SLLTAAAIQ 759
             L    AIQ
Sbjct: 741  CLRVVQAIQ 749


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score =  118 bits (295), Expect = 2e-24
 Identities = 71/260 (27%), Positives = 123/260 (47%), Gaps = 20/260 (7%)
 Frame = +1

Query: 16  WNNLWNLVLPHKMKIFLWRFCRNNIPVRIRLKTKGVSIPILCPFCTGV-EHLLHLFFDCP 192
           W+ +W L +P ++K  +WR CR   P R+RL ++GV+ P  C  C    E   H+FF C 
Sbjct: 56  WSGIWRLKVPPRVKKLVWRVCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCR 115

Query: 193 FAQECWRSAGLIY----DMSTVYYAPDWLLGKLEMGTREEAHKISTVLYGIWHWRNKKVW 360
            A + W +A + +     +S    APD +   L+  +  +   I T+++ IW  RN K+W
Sbjct: 116 TAIDVWNTANVWHLIAPSLSQFDNAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLW 175

Query: 361 EEKTISADTAMTNSFGYVKEWQEARARNEVKASV-------------QKSCDKESKRKWT 501
           ++ + S+ T +  +   ++ W++A  +  +   V             Q + ++    +W 
Sbjct: 176 QQVSESSVTILERAKHLLEGWRKANHKQGLLGQVHSPTNSRPQTHDSQNTDNRYGNIRWR 235

Query: 502 PPVDNTFKVNVDASMFPDALEFTVGMVIRDHKGVFLEGRNLTLP--CPSSVFEAECIGVR 675
            P     K NVDAS    + +  +GM IRD +G  +  + +     CP ++ EA  +G+ 
Sbjct: 236 KPKSGRLKCNVDASFSTSSNKVGIGMCIRDSEGNHVRSKTMWFSPLCPVNIGEA--LGLY 293

Query: 676 EALSWVMSRQERRVVVETDS 735
            A  W+   Q   V  E DS
Sbjct: 294 HATRWINELQLTNVDFEVDS 313


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
            Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score =  117 bits (292), Expect = 4e-24
 Identities = 76/247 (30%), Positives = 113/247 (45%), Gaps = 7/247 (2%)
 Frame = +1

Query: 16   WNNLWNLVLPHKMKIFLWRFCRNNIPVRIRLKTKGVSIPILCPFCTGV-EHLLHLFFDCP 192
            WN +W L LP K+K FLWR CRN +P RIRL++KGV     C  C    E   HLFF C 
Sbjct: 366  WNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCS 425

Query: 193  FAQECWRSAGL------IYDMSTVYYAPDWLLGKLEMGTREEAHKISTVLYGIWHWRNKK 354
             +   W+  GL      ++D++  +  P  +   L+   +++    S  L+ IW  RN K
Sbjct: 426  KSMLYWQRIGLWSPLMAVFDINVSF--PTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNK 483

Query: 355  VWEEKTISADTAMTNSFGYVKEWQEARARNEVKASVQKSCDKESKRKWTPPVDNTFKVNV 534
            VW   T +A      +   +  W+ A+    ++    ++    +  KW  P    F  NV
Sbjct: 484  VWNNITDTAQDICARAGSLLTSWRNAQ---NIRHPSPQNPSTPNDLKWVKPSPGRFTCNV 540

Query: 535  DASMFPDALEFTVGMVIRDHKGVFLEGRNLTLPCPSSVFEAECIGVREALSWVMSRQERR 714
            DAS         +G+ IRD +G F+  +   +     V   E +G+  A+ WV   Q   
Sbjct: 541  DASFSQARNRVGIGVCIRDEEGRFVLAKTEWMTPLLDVELGEALGLLSAMHWVRDLQLGI 600

Query: 715  VVVETDS 735
            V  E DS
Sbjct: 601  VDFELDS 607


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  113 bits (283), Expect = 4e-23
 Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 5/259 (1%)
 Frame = +1

Query: 16   WNNLWNLVLPHKMKIFLWRFCRNNIPVRIRLKTKGVSIPILCPFCTGV-EHLLHLFFDCP 192
            W  LWNL +P K+K FLWR CRN +P R+RL+ +GV+    C  C    E  +HLFF C 
Sbjct: 1417 WVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCT 1476

Query: 193  FAQECWRSAGL---IYDMSTVYYAPDWLLGKLEMGTREEAHKI-STVLYGIWHWRNKKVW 360
             +++CW+  GL   +   + +  +    + ++          I + V++ IW  RN  +W
Sbjct: 1477 KSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIW 1536

Query: 361  EEKTISADTAMTNSFGYVKEWQEARARNEVKASVQKSCDKESKRKWTPPVDNTFKVNVDA 540
              + ++           +  WQ A                  +  W  P +  FK NVDA
Sbjct: 1537 RNEVMTTAAVRDRGLNLLTGWQNA------------------QDIWRKPDEGHFKCNVDA 1578

Query: 541  SMFPDALEFTVGMVIRDHKGVFLEGRNLTLPCPSSVFEAECIGVREALSWVMSRQERRVV 720
            + F ++    +G+ IRD  G  ++ R         V E E IG+  A+ W   +    + 
Sbjct: 1579 AFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAKEQNLNNIT 1638

Query: 721  VETDSLLTAAAIQSERRNL 777
             E DS     +  + R ++
Sbjct: 1639 FELDSKRVVYSFHNTRNDV 1657


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score =  105 bits (261), Expect = 1e-20
 Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 5/249 (2%)
 Frame = +1

Query: 7   SKGWNNLWNLVLPHKMKIFLWRFCRNNIPVRIRLKTKGVSIPILC-PFCTGVEHLLHLFF 183
           +  W N+WNL +PH+++ FLWR   N +P R+ L  +G+     C  F    E   HLFF
Sbjct: 112 NSSWMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQCEESCVMFENFAECHTHLFF 171

Query: 184 DCPFAQECWRSAGLIYDMSTVYYAPD----WLLGKLEMGTREEAHKISTVLYGIWHWRNK 351
            C  A +CW++ GL   +S +    +     L   +     ++      +L+ +W  RN 
Sbjct: 172 VCAKAMDCWKNIGLHVVLSELLPLANNFTTLLFDFMHRLCSQQQQAAGMLLWSLWKSRNI 231

Query: 352 KVWEEKTISADTAMTNSFGYVKEWQEARARNEVKASVQKSCDKESKRKWTPPVDNTFKVN 531
           K+W+    +    ++ +   + EW      + ++++  +  +      W  P     K N
Sbjct: 232 KLWDSTDTTTAITISRAKDTLHEW------SCMQSAKTQPINPNHHISWVKPTGGMIKCN 285

Query: 532 VDASMFPDALEFTVGMVIRDHKGVFLEGRNLTLPCPSSVFEAECIGVREALSWVMSRQER 711
           +DA++F + +    G+  R+ +   L G++  +    SV EAE I + EA+   +S    
Sbjct: 286 MDAAIFQNNVAAGYGICCRNSEDELLLGKSAIIHSSLSVLEAEAIVLLEAMKLSISSGFH 345

Query: 712 RVVVETDSL 738
            V  ETD +
Sbjct: 346 HVYYETDRI 354