BLASTX nr result

ID: Bupleurum21_contig00020008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020008
         (1134 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526154.1| conserved hypothetical protein [Ricinus comm...   531   e-149
ref|XP_002302193.1| predicted protein [Populus trichocarpa] gi|2...   529   e-148
ref|XP_002306680.1| predicted protein [Populus trichocarpa] gi|2...   528   e-148
ref|XP_002278084.1| PREDICTED: transmembrane protein 184C [Vitis...   516   e-144
ref|XP_002887672.1| hypothetical protein ARALYDRAFT_895607 [Arab...   513   e-143

>ref|XP_002526154.1| conserved hypothetical protein [Ricinus communis]
           gi|223534531|gb|EEF36230.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 484

 Score =  531 bits (1369), Expect = e-149
 Identities = 256/330 (77%), Positives = 282/330 (85%)
 Frame = -3

Query: 991 MEWRGVMLSLCLLVNLVESSRVTEAIWSASLHGDHTSLYNWSICXXXXXXXXXXXXSMYL 812
           M W G   SL  L  LVES+R +  +W+  L  +     +W I             SMYL
Sbjct: 1   MGWTGAFCSLFFLFTLVESTRSSGKVWTLHLDAESVGNISWPIFSASIFVLVALFLSMYL 60

Query: 811 VFEHLAAYNQPEEQKFMIGLILMVPVYALESFLSLLDPDAAFNCEIIRDCYEAFALYCFE 632
           +FEHLAAYNQPEEQKF+IGLILMVPVYALESFLSLLD +AAFNCE IRDCYEAFALYCFE
Sbjct: 61  IFEHLAAYNQPEEQKFLIGLILMVPVYALESFLSLLDSNAAFNCEAIRDCYEAFALYCFE 120

Query: 631 RYLIACLGGEDSTIKYMESQSIITSSMPLLEESYTYGIVEHPFPLNCFLKDWHLGADFYQ 452
           RYLIACLGGE+STI++MESQ++ITSSMPLLEESY YG+VEHPFPLN FL+DW LG DFY 
Sbjct: 121 RYLIACLGGEESTIEFMESQTVITSSMPLLEESYAYGVVEHPFPLNWFLRDWQLGPDFYY 180

Query: 451 AVKIGIVQYMILKLICALVAMVCQFFGVYGDGKFEWGYAYPYLAVVLNFSQTWALYCLVQ 272
           AVK+GIVQYMILKLICAL+AM+ + FGVYG+GKFEW Y YPYLA+VLNFSQTWALYCLVQ
Sbjct: 181 AVKVGIVQYMILKLICALLAMILEAFGVYGEGKFEWKYGYPYLAIVLNFSQTWALYCLVQ 240

Query: 271 FYSVIKDKLAPIKPLAKFLTFKSIVFLTWWQGIAVAFLFSMGAFKGSLAKELKARIQDYI 92
           FYSVIKDKLAPIKPLAKFLTFKSIVFLTWWQG+AVAFLFSMGAF+G LA+ELK RIQDYI
Sbjct: 241 FYSVIKDKLAPIKPLAKFLTFKSIVFLTWWQGVAVAFLFSMGAFRGHLAQELKTRIQDYI 300

Query: 91  ICIEMGVAAVVHLYVFPAVPYKRGERCVRN 2
           ICIEMG+AAVVHLYVFPAVPYKRGERCVRN
Sbjct: 301 ICIEMGIAAVVHLYVFPAVPYKRGERCVRN 330


>ref|XP_002302193.1| predicted protein [Populus trichocarpa] gi|222843919|gb|EEE81466.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  529 bits (1362), Expect = e-148
 Identities = 253/330 (76%), Positives = 283/330 (85%)
 Frame = -3

Query: 991 MEWRGVMLSLCLLVNLVESSRVTEAIWSASLHGDHTSLYNWSICXXXXXXXXXXXXSMYL 812
           MEWRG   SL  L  LVES+     +W+ +L  +     +W I             SMYL
Sbjct: 1   MEWRGACCSLFFLFKLVESTSGLGKVWALNLGAETVVNVSWPIFIASIFVLLALVLSMYL 60

Query: 811 VFEHLAAYNQPEEQKFMIGLILMVPVYALESFLSLLDPDAAFNCEIIRDCYEAFALYCFE 632
           +FEHLAAYNQPEEQKF+IGLILMVPVY+LESFLSLLD  AAFNCE IRDCYEAFALYCFE
Sbjct: 61  IFEHLAAYNQPEEQKFLIGLILMVPVYSLESFLSLLDSSAAFNCEAIRDCYEAFALYCFE 120

Query: 631 RYLIACLGGEDSTIKYMESQSIITSSMPLLEESYTYGIVEHPFPLNCFLKDWHLGADFYQ 452
           RYLIACLGGE++TI++MESQ++IT S PLLE+S+ YG+VEHPFPLNCFL+DW+LGADFY 
Sbjct: 121 RYLIACLGGEENTIEFMESQTLITPSSPLLEDSHAYGVVEHPFPLNCFLRDWNLGADFYN 180

Query: 451 AVKIGIVQYMILKLICALVAMVCQFFGVYGDGKFEWGYAYPYLAVVLNFSQTWALYCLVQ 272
           AVKIGIVQYMILKLICAL+AM  Q FGVYG+GKFEW Y YPYLAV+LNFSQTWALYCLVQ
Sbjct: 181 AVKIGIVQYMILKLICALLAMTLQAFGVYGEGKFEWRYGYPYLAVILNFSQTWALYCLVQ 240

Query: 271 FYSVIKDKLAPIKPLAKFLTFKSIVFLTWWQGIAVAFLFSMGAFKGSLAKELKARIQDYI 92
           FYSVIKDKLAPIKPLAKFLTFKSIVFLTWWQG+A+AFLFSMGAFKG+LA+ELK RIQDYI
Sbjct: 241 FYSVIKDKLAPIKPLAKFLTFKSIVFLTWWQGVAIAFLFSMGAFKGALAQELKTRIQDYI 300

Query: 91  ICIEMGVAAVVHLYVFPAVPYKRGERCVRN 2
           ICIEMG+AA+VHLYVFP+VPYKRGERCVRN
Sbjct: 301 ICIEMGIAAIVHLYVFPSVPYKRGERCVRN 330


>ref|XP_002306680.1| predicted protein [Populus trichocarpa] gi|222856129|gb|EEE93676.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  528 bits (1361), Expect = e-148
 Identities = 253/330 (76%), Positives = 282/330 (85%)
 Frame = -3

Query: 991 MEWRGVMLSLCLLVNLVESSRVTEAIWSASLHGDHTSLYNWSICXXXXXXXXXXXXSMYL 812
           MEWRG    L  L  LV+S+  +  +W+  L  +     +W I             SMYL
Sbjct: 1   MEWRGTFCCLFFLFELVKSTSQSGKVWALYLGAESVVNVSWPIFSAGIFVLLALILSMYL 60

Query: 811 VFEHLAAYNQPEEQKFMIGLILMVPVYALESFLSLLDPDAAFNCEIIRDCYEAFALYCFE 632
           +FEHLAAYNQPEEQKF+IGLILMVPVY+LESFLSLLD  AAFNCE IRDCYEAFALYCFE
Sbjct: 61  IFEHLAAYNQPEEQKFLIGLILMVPVYSLESFLSLLDSSAAFNCEAIRDCYEAFALYCFE 120

Query: 631 RYLIACLGGEDSTIKYMESQSIITSSMPLLEESYTYGIVEHPFPLNCFLKDWHLGADFYQ 452
           RYLIACLGGE++TI++MESQ++ITSS PLLEESY YG+VEHPFPLNCFL+DW+LGADFY 
Sbjct: 121 RYLIACLGGEENTIQFMESQTLITSSSPLLEESYAYGVVEHPFPLNCFLRDWNLGADFYH 180

Query: 451 AVKIGIVQYMILKLICALVAMVCQFFGVYGDGKFEWGYAYPYLAVVLNFSQTWALYCLVQ 272
           AVKIG+VQYMILKLICAL+AM+ Q FGVYG+GKFEW Y YPYLAV+LNFSQTWALYCLVQ
Sbjct: 181 AVKIGVVQYMILKLICALLAMILQAFGVYGEGKFEWRYGYPYLAVILNFSQTWALYCLVQ 240

Query: 271 FYSVIKDKLAPIKPLAKFLTFKSIVFLTWWQGIAVAFLFSMGAFKGSLAKELKARIQDYI 92
           FYSVIKDKLAPIKPLAKFLTFKSIVFLTWWQG+ VAFL SMGAFKG+LA+ELK RIQDYI
Sbjct: 241 FYSVIKDKLAPIKPLAKFLTFKSIVFLTWWQGVVVAFLNSMGAFKGTLAQELKTRIQDYI 300

Query: 91  ICIEMGVAAVVHLYVFPAVPYKRGERCVRN 2
           ICIEMG+AA+VHLYVFPAVPYKRGERCVRN
Sbjct: 301 ICIEMGIAAIVHLYVFPAVPYKRGERCVRN 330


>ref|XP_002278084.1| PREDICTED: transmembrane protein 184C [Vitis vinifera]
           gi|302142772|emb|CBI19975.3| unnamed protein product
           [Vitis vinifera]
          Length = 483

 Score =  516 bits (1329), Expect = e-144
 Identities = 250/330 (75%), Positives = 278/330 (84%)
 Frame = -3

Query: 991 MEWRGVMLSLCLLVNLVESSRVTEAIWSASLHGDHTSLYNWSICXXXXXXXXXXXXSMYL 812
           M WRG    L  L+ LVESS     +W   L     S+Y+W+I             SMYL
Sbjct: 1   MGWRGSFYFLFFLLTLVESSSRPGTMWLLDLDAKSPSVYSWAISSASIFVLVALVLSMYL 60

Query: 811 VFEHLAAYNQPEEQKFMIGLILMVPVYALESFLSLLDPDAAFNCEIIRDCYEAFALYCFE 632
           + EHLAAYNQPEEQKF+IGLILMVPVYALESFLSLLD +AAFNC+IIRDCYEAFALYCFE
Sbjct: 61  IVEHLAAYNQPEEQKFLIGLILMVPVYALESFLSLLDSNAAFNCQIIRDCYEAFALYCFE 120

Query: 631 RYLIACLGGEDSTIKYMESQSIITSSMPLLEESYTYGIVEHPFPLNCFLKDWHLGADFYQ 452
           RYLIACLGGE ST+++MESQ +I  S PLLEE+YTYGIVEHPFPLN FL++W+LG DFYQ
Sbjct: 121 RYLIACLGGEKSTVEFMESQRLIDCSTPLLEEAYTYGIVEHPFPLNFFLREWYLGRDFYQ 180

Query: 451 AVKIGIVQYMILKLICALVAMVCQFFGVYGDGKFEWGYAYPYLAVVLNFSQTWALYCLVQ 272
           AVK+GIVQYMILK+ICAL+A+  +F GVYG+GKFEW Y YPYLAVVLNFSQTWALYCLVQ
Sbjct: 181 AVKVGIVQYMILKMICALLAIFLEFLGVYGEGKFEWRYGYPYLAVVLNFSQTWALYCLVQ 240

Query: 271 FYSVIKDKLAPIKPLAKFLTFKSIVFLTWWQGIAVAFLFSMGAFKGSLAKELKARIQDYI 92
           FY+V KDKL PIKPLAKFL FKSIVFLTWWQG+AVAFLFS+GAFKGSLA+ELK RIQDYI
Sbjct: 241 FYTVTKDKLEPIKPLAKFLVFKSIVFLTWWQGVAVAFLFSIGAFKGSLAQELKTRIQDYI 300

Query: 91  ICIEMGVAAVVHLYVFPAVPYKRGERCVRN 2
           ICIEMGVAAVVHLYVFPAVPY+RGERCVRN
Sbjct: 301 ICIEMGVAAVVHLYVFPAVPYQRGERCVRN 330


>ref|XP_002887672.1| hypothetical protein ARALYDRAFT_895607 [Arabidopsis lyrata subsp.
           lyrata] gi|297333513|gb|EFH63931.1| hypothetical protein
           ARALYDRAFT_895607 [Arabidopsis lyrata subsp. lyrata]
          Length = 484

 Score =  513 bits (1321), Expect = e-143
 Identities = 244/330 (73%), Positives = 275/330 (83%)
 Frame = -3

Query: 991 MEWRGVMLSLCLLVNLVESSRVTEAIWSASLHGDHTSLYNWSICXXXXXXXXXXXXSMYL 812
           MEWRG++ SL  +++  ESS     +W  +L  D      W I              MYL
Sbjct: 1   MEWRGILCSLLFIISAGESSSRFGLMWHPNLGVDSGQYLTWPILSASVFVVIAILLPMYL 60

Query: 811 VFEHLAAYNQPEEQKFMIGLILMVPVYALESFLSLLDPDAAFNCEIIRDCYEAFALYCFE 632
           +FEHLA+YNQPEEQKF+IGLILMVPVYA+ESFLSL++ +AAFNCE+IRDCYEAFALYCFE
Sbjct: 61  IFEHLASYNQPEEQKFLIGLILMVPVYAVESFLSLVNSEAAFNCEVIRDCYEAFALYCFE 120

Query: 631 RYLIACLGGEDSTIKYMESQSIITSSMPLLEESYTYGIVEHPFPLNCFLKDWHLGADFYQ 452
           RYLIACL GE+ TI+YME Q++IT S PLLE + +YG+VEHPFP+NCFLKDW LG +FY 
Sbjct: 121 RYLIACLDGEERTIEYMEQQTVITQSTPLLEGTCSYGVVEHPFPMNCFLKDWSLGPEFYH 180

Query: 451 AVKIGIVQYMILKLICALVAMVCQFFGVYGDGKFEWGYAYPYLAVVLNFSQTWALYCLVQ 272
           AVKIGIVQYMILK+ICAL+AM+ + FGVYG+GKF W Y YPYLAVVLNFSQTWALYCLVQ
Sbjct: 181 AVKIGIVQYMILKMICALLAMILEAFGVYGEGKFAWNYGYPYLAVVLNFSQTWALYCLVQ 240

Query: 271 FYSVIKDKLAPIKPLAKFLTFKSIVFLTWWQGIAVAFLFSMGAFKGSLAKELKARIQDYI 92
           FY+VIKDKLAPIKPLAKFLTFKSIVFLTWWQGI VAFLFSMG FKGSLAKELK RIQDYI
Sbjct: 241 FYNVIKDKLAPIKPLAKFLTFKSIVFLTWWQGIIVAFLFSMGLFKGSLAKELKTRIQDYI 300

Query: 91  ICIEMGVAAVVHLYVFPAVPYKRGERCVRN 2
           ICIEMG+AAVVHLYVFPA PYKRGERCVRN
Sbjct: 301 ICIEMGIAAVVHLYVFPAAPYKRGERCVRN 330


Top