BLASTX nr result

ID: Bupleurum21_contig00019499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019499
         (968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548755.1| PREDICTED: short-chain type dehydrogenase/re...   184   3e-44
ref|XP_002282201.1| PREDICTED: short-chain type dehydrogenase/re...   176   6e-42
dbj|BAE46415.1| short chain dehydrogenase [Solanum tuberosum]         173   6e-41
ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|2...   171   2e-40
ref|XP_002525442.1| short-chain type dehydrogenase, putative [Ri...   166   6e-39

>ref|XP_003548755.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Glycine
           max]
          Length = 265

 Score =  184 bits (467), Expect = 3e-44
 Identities = 101/176 (57%), Positives = 121/176 (68%), Gaps = 2/176 (1%)
 Frame = +3

Query: 39  SMAEASAAAKPPLHLHNRVAIVTGGSRGIGQAISLHLASLGAKLXXXXXXXXXXXXXXXX 218
           S +E+ + +KP   L +RVAIVTG SRGIG+ I+LHLASLGA+L                
Sbjct: 3   SSSESQSQSKP---LQDRVAIVTGSSRGIGREIALHLASLGARLVVNYTSNSAQADSVAA 59

Query: 219 XXXXXXXEDSPRAVAVQADISDPLQVKHLFTTAEATFDSPIHILVNSAGVLNPNYDSVQN 398
                    +PRAV VQAD+SDP QVK LF +AE  FDSPIHILVNSAGV++  Y SV +
Sbjct: 60  QINAGSATTTPRAVVVQADVSDPAQVKSLFDSAERAFDSPIHILVNSAGVIDGTYPSVAD 119

Query: 399 TTIEAFDRAFEVNARGAFLCCREAANRMV--AGGRIICITTSMVLGLKPGYGAYAA 560
           TT+E+FDR F VNARGAF C REAANR+    GGRII +TTS V+ L+PGYGAYAA
Sbjct: 120 TTVESFDRTFAVNARGAFACAREAANRLKRGGGGRIILLTTSQVVALRPGYGAYAA 175



 Score =  120 bits (300), Expect = 6e-25
 Identities = 53/70 (75%), Positives = 63/70 (90%)
 Frame = +2

Query: 692 ITANCVAPGPVATEMFFKGKTEEMVEKAVAECPLGRLGEPEDVAPVVAFLASDAGEWING 871
           ITANCVAPGP+ATEMFF+GKTEE+V + V E PLGRLGE +DVAPVV FLA+DA EW+NG
Sbjct: 196 ITANCVAPGPIATEMFFEGKTEEVVNRIVQESPLGRLGETKDVAPVVGFLATDASEWVNG 255

Query: 872 QVIRVNGGYV 901
           Q++RVNGGY+
Sbjct: 256 QIVRVNGGYI 265


>ref|XP_002282201.1| PREDICTED: short-chain type dehydrogenase/reductase-like [Vitis
           vinifera]
          Length = 258

 Score =  176 bits (447), Expect = 6e-42
 Identities = 93/165 (56%), Positives = 114/165 (69%), Gaps = 2/165 (1%)
 Frame = +3

Query: 72  PLHLHNRVAIVTGGSRGIGQAISLHLASLGAKLXXXXXXXXXXXXXXXXXXXXXXXEDSP 251
           PL L +R+AIVTG SRGIG+A +LHLASLGAK+                         SP
Sbjct: 4   PLPLQDRIAIVTGASRGIGRATALHLASLGAKIVINYTSNKAQAELVAAEINSSSSPSSP 63

Query: 252 RAVAVQADISDPLQVKHLFTTAEATFDSPIHILVNSAGVLNPNYDSVQNTTIEAFDRAFE 431
           RA+  QAD+SDP QVK LF TAE  F+SP HILVNSAGVL+  Y ++ NT++E FD+ F 
Sbjct: 64  RAIICQADVSDPTQVKSLFDTAEQIFNSPPHILVNSAGVLDAKYPTIANTSLEDFDKIFS 123

Query: 432 VNARGAFLCCREAANRMVAG--GRIICITTSMVLGLKPGYGAYAA 560
           +N+RGAFLCCREAANR+  G  GRII ++TS+V  LKPG+GAYAA
Sbjct: 124 INSRGAFLCCREAANRIKRGGAGRIILMSTSLVGSLKPGFGAYAA 168



 Score =  113 bits (282), Expect = 8e-23
 Identities = 51/70 (72%), Positives = 60/70 (85%)
 Frame = +2

Query: 692 ITANCVAPGPVATEMFFKGKTEEMVEKAVAECPLGRLGEPEDVAPVVAFLASDAGEWING 871
           IT NCVAPGP+AT+MFF GK+EE V+KA+ + PL RLGE +DVA VV FLASD GEW+NG
Sbjct: 189 ITVNCVAPGPIATDMFFSGKSEEDVKKAIEDSPLSRLGETKDVASVVGFLASDGGEWVNG 248

Query: 872 QVIRVNGGYV 901
           QV+RVNGGYV
Sbjct: 249 QVVRVNGGYV 258


>dbj|BAE46415.1| short chain dehydrogenase [Solanum tuberosum]
          Length = 261

 Score =  173 bits (438), Expect = 6e-41
 Identities = 96/175 (54%), Positives = 119/175 (68%), Gaps = 2/175 (1%)
 Frame = +3

Query: 42  MAEASAAAKPPLHLHNRVAIVTGGSRGIGQAISLHLASLGAKLXXXXXXXXXXXXXXXXX 221
           MAE + A     +L NRVAIVTG SRGIG+AI+LHLASLGAKL                 
Sbjct: 1   MAEVNVAQGQ--NLGNRVAIVTGSSRGIGKAIALHLASLGAKLVINYTSNSTQADDVVSQ 58

Query: 222 XXXXXXEDSPRAVAVQADISDPLQVKHLFTTAEATFDSPIHILVNSAGVLNPNYDSVQNT 401
                  DSPRA+AV+A++SDP QVK LF  AE+ F SP++ILVN AGVL+  Y S+ NT
Sbjct: 59  INST--SDSPRAIAVKANVSDPDQVKSLFDAAESAFQSPVNILVNCAGVLDGKYPSILNT 116

Query: 402 TIEAFDRAFEVNARGAFLCCREAANRMV--AGGRIICITTSMVLGLKPGYGAYAA 560
            +E FDR F VN RGAF+CC+E ANR+    GGRIIC+++SM + L+PG+GAYAA
Sbjct: 117 PLEDFDRTFGVNVRGAFICCKEGANRIQRGGGGRIICLSSSMAVALRPGFGAYAA 171



 Score =  119 bits (299), Expect = 8e-25
 Identities = 51/70 (72%), Positives = 61/70 (87%)
 Frame = +2

Query: 692 ITANCVAPGPVATEMFFKGKTEEMVEKAVAECPLGRLGEPEDVAPVVAFLASDAGEWING 871
           IT NC APGP+AT+MF++GKTEEM++KA+ ECP GRLG PEDVAPVV FLA D  EW+NG
Sbjct: 192 ITVNCAAPGPIATDMFYEGKTEEMIKKAIDECPHGRLGLPEDVAPVVGFLAGDTSEWVNG 251

Query: 872 QVIRVNGGYV 901
           Q+IRVNGGY+
Sbjct: 252 QIIRVNGGYI 261


>ref|XP_002319166.1| predicted protein [Populus trichocarpa] gi|222857542|gb|EEE95089.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  171 bits (433), Expect = 2e-40
 Identities = 93/172 (54%), Positives = 116/172 (67%), Gaps = 5/172 (2%)
 Frame = +3

Query: 60  AAKPPL---HLHNRVAIVTGGSRGIGQAISLHLASLGAKLXXXXXXXXXXXXXXXXXXXX 230
           AA+ PL    L +RVAIVTG SRGIG+AI++HLASLGAKL                    
Sbjct: 2   AAQSPLLSLPLQDRVAIVTGSSRGIGKAIAIHLASLGAKLVINYTSNKEQADLVANDINS 61

Query: 231 XXXEDSPRAVAVQADISDPLQVKHLFTTAEATFDSPIHILVNSAGVLNPNYDSVQNTTIE 410
              +++PRA+  QA++SDP QVK LF  AE  F S +HILVN AGVL+P Y S+ NT++E
Sbjct: 62  SCVDNTPRAIVAQANVSDPAQVKFLFDEAERVFGSQLHILVNCAGVLDPKYPSIPNTSLE 121

Query: 411 AFDRAFEVNARGAFLCCREAANRMV--AGGRIICITTSMVLGLKPGYGAYAA 560
            FD  F VN RGAFLCC+EAA+R+    GGRII +++SMV GL PG+GAYAA
Sbjct: 122 DFDHIFSVNTRGAFLCCKEAASRLKHGGGGRIIVLSSSMVGGLMPGFGAYAA 173



 Score =  110 bits (275), Expect = 5e-22
 Identities = 50/70 (71%), Positives = 58/70 (82%)
 Frame = +2

Query: 692 ITANCVAPGPVATEMFFKGKTEEMVEKAVAECPLGRLGEPEDVAPVVAFLASDAGEWING 871
           ITANCVAPGPVATEM+F GKTEE ++  +   PLGRLGE +D+A VV F+A+DA EWING
Sbjct: 194 ITANCVAPGPVATEMYFAGKTEEQIKNNIESSPLGRLGETKDIAEVVGFMATDASEWING 253

Query: 872 QVIRVNGGYV 901
           QVIR NGGYV
Sbjct: 254 QVIRANGGYV 263


>ref|XP_002525442.1| short-chain type dehydrogenase, putative [Ricinus communis]
           gi|223535255|gb|EEF36932.1| short-chain type
           dehydrogenase, putative [Ricinus communis]
          Length = 268

 Score =  166 bits (421), Expect = 6e-39
 Identities = 89/176 (50%), Positives = 115/176 (65%), Gaps = 6/176 (3%)
 Frame = +3

Query: 51  ASAAAKPP----LHLHNRVAIVTGGSRGIGQAISLHLASLGAKLXXXXXXXXXXXXXXXX 218
           A+++A P     L L +RVAIVTG SRGIG+AI+LHLASLGAKL                
Sbjct: 3   AASSANPQNPTSLPLQDRVAIVTGSSRGIGKAIALHLASLGAKLVINYSSNKEQADLVAR 62

Query: 219 XXXXXXXEDSPRAVAVQADISDPLQVKHLFTTAEATFDSPIHILVNSAGVLNPNYDSVQN 398
                  +DSPRA+AVQA++SDP  VK LF  AE  F   +H+ VNSAG L+  Y S+ +
Sbjct: 63  DVNSSSEKDSPRAIAVQANVSDPTHVKFLFDEAERVFGCQVHVFVNSAGTLDSKYPSIAD 122

Query: 399 TTIEAFDRAFEVNARGAFLCCREAANRMV--AGGRIICITTSMVLGLKPGYGAYAA 560
           T++E FD  F +N RGAFLCC+EAANR+    GGRI+ +++S V  L+PG+GAYAA
Sbjct: 123 TSLEGFDLTFSINTRGAFLCCKEAANRLKRGGGGRIVVLSSSQVGALRPGFGAYAA 178



 Score =  124 bits (311), Expect = 3e-26
 Identities = 52/70 (74%), Positives = 64/70 (91%)
 Frame = +2

Query: 692 ITANCVAPGPVATEMFFKGKTEEMVEKAVAECPLGRLGEPEDVAPVVAFLASDAGEWING 871
           ITANCVAPGP+AT+M+F GKTEE +++ +AECPLGRLGEP+DVAP+V FLA+DA EW+NG
Sbjct: 199 ITANCVAPGPIATDMYFSGKTEEQIQRNIAECPLGRLGEPKDVAPIVGFLATDASEWVNG 258

Query: 872 QVIRVNGGYV 901
           QV+R NGGYV
Sbjct: 259 QVVRANGGYV 268


Top