BLASTX nr result

ID: Bupleurum21_contig00019498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019498
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cuc...    71   8e-11
ref|XP_004155670.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-40...    69   3e-10
gb|ACU20912.1| unknown [Glycine max]                                   67   1e-09
ref|XP_003556026.1| PREDICTED: uncharacterized protein LOC100793...    67   2e-09
ref|XP_003536551.1| PREDICTED: uncharacterized protein LOC100789...    67   2e-09

>ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cucumis sativus]
          Length = 344

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 30/36 (83%), Positives = 32/36 (88%)
 Frame = -2

Query: 251 MIVALFFSCLAVNKVVFLDNWKTGYGIHGYWPSSWN 144
           MI+ALF S  AV KVV+LDNWKTGYGIHGYWPSSWN
Sbjct: 309 MIIALFVSFWAVKKVVYLDNWKTGYGIHGYWPSSWN 344


>ref|XP_004155670.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-40S ribosomal protein
           S27a-like [Cucumis sativus]
          Length = 228

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = -2

Query: 248 IVALFFSCLAVNKVVFLDNWKTGYGIHGYWPSSWN 144
           I+ALF S  AV KVV+LDNWKTGYGIHGYWPSSWN
Sbjct: 194 IIALFVSFWAVKKVVYLDNWKTGYGIHGYWPSSWN 228


>gb|ACU20912.1| unknown [Glycine max]
          Length = 336

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -2

Query: 251 MIVALFFSCLAVNKVVFLDNWKTGYGIHGYWPSSWN 144
           MI AL  S LAV +VV+LDNWKTGYGIHG+WPSSWN
Sbjct: 301 MIFALLVSFLAVKRVVYLDNWKTGYGIHGFWPSSWN 336


>ref|XP_003556026.1| PREDICTED: uncharacterized protein LOC100793228 [Glycine max]
          Length = 336

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -2

Query: 251 MIVALFFSCLAVNKVVFLDNWKTGYGIHGYWPSSWN 144
           MI AL  S LAV +VV+LDNWKTGYGIHG+WPSSWN
Sbjct: 301 MIFALLVSFLAVKQVVYLDNWKTGYGIHGFWPSSWN 336


>ref|XP_003536551.1| PREDICTED: uncharacterized protein LOC100789480 [Glycine max]
          Length = 334

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = -2

Query: 251 MIVALFFSCLAVNKVVFLDNWKTGYGIHGYWPSSWN 144
           MI AL  S LAV +VV+LDNWKTGYGIHG+WPSSWN
Sbjct: 299 MIFALLVSFLAVKQVVYLDNWKTGYGIHGFWPSSWN 334


Top