BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019488
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   116   3e-24
ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...   113   3e-23
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...   105   8e-21
ref|XP_002532007.1| conserved hypothetical protein [Ricinus comm...    99   6e-19
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    99   7e-19

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  116 bits (291), Expect = 3e-24
 Identities = 67/195 (34%), Positives = 101/195 (51%), Gaps = 4/195 (2%)
 Frame = -2

Query: 577  QVVGNAIFMFEQWKKAQ----VSILYPSVSSWYMTEGYELWTKPAINKLKVNIDAAVFEN 410
            QVV     M E W  A      ++  PS SS         W KP    +K+N+D AVF +
Sbjct: 632  QVVNGCFTMLESWFHANETLATAVTVPSYSS--------KWQKPDYGWIKINVDGAVFPD 683

Query: 409  EGKYGFGGVVRDHLGRFVSAISGLREGMVLPEVAEGIALKEVLSWLKSQARASYQVESDC 230
            +G    G V RDH GRF+   +       LP+V E + ++EVLSW+  ++R+   VE+DC
Sbjct: 684  KG--AIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDC 741

Query: 229  LVLVQAIRNSEIMKSTFGGIVQDCKDVLNSWSEVDLHFVKRSANRVAHHTARASRLYADC 50
            L +VQAI++     ++FG I+ DC DVL    +V + + +RSAN  AH  A  +  +   
Sbjct: 742  LRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACSFTSL 801

Query: 49   MFFEHNVPADIMYCI 5
              + +  P  I+ C+
Sbjct: 802  HIWGYTPPQCILSCL 816


>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score =  113 bits (282), Expect = 3e-23
 Identities = 58/159 (36%), Positives = 90/159 (56%)
 Frame = -2

Query: 544 QWKKAQVSILYPSVSSWYMTEGYELWTKPAINKLKVNIDAAVFENEGKYGFGGVVRDHLG 365
           QW+ A+  +      +  +     +W  P++  +KVN+DA +F N    G G V++DH G
Sbjct: 3   QWRVARSKLFCLQSQNGNIALFVMVWNTPSLGSMKVNMDATIFSNPDSMGVGCVMKDHAG 62

Query: 364 RFVSAISGLREGMVLPEVAEGIALKEVLSWLKSQARASYQVESDCLVLVQAIRNSEIMKS 185
            FV A++    G  +PE+AEG+A++E LSW + +   +   E DCL +V+A+      +S
Sbjct: 63  LFVCAMAVSFAGAYIPEIAEGLAIQEALSWARDRQLLNVVFELDCLHIVEALLRKGTDRS 122

Query: 184 TFGGIVQDCKDVLNSWSEVDLHFVKRSANRVAHHTARAS 68
           + G I++DCK + +S S     FVKRS N VAH  AR S
Sbjct: 123 SLGLIIKDCKLLSSSISNCSFAFVKRSRNEVAHKLARVS 161


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score =  105 bits (261), Expect = 8e-21
 Identities = 50/134 (37%), Positives = 78/134 (58%)
 Frame = -2

Query: 469 WTKPAINKLKVNIDAAVFENEGKYGFGGVVRDHLGRFVSAISGLREGMVLPEVAEGIALK 290
           W  PA   LK N+DAA+F  + ++G G  VRD  GRF+ A +   EG   P+ AE + L+
Sbjct: 57  WQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLR 116

Query: 289 EVLSWLKSQARASYQVESDCLVLVQAIRNSEIMKSTFGGIVQDCKDVLNSWSEVDLHFVK 110
           + + WL     ++ Q+E DC ++V +I +    ++ FG I+ DC+ +L  ++   + FV+
Sbjct: 117 DAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVR 176

Query: 109 RSANRVAHHTARAS 68
           R AN VAH  AR S
Sbjct: 177 RQANVVAHSFARVS 190


>ref|XP_002532007.1| conserved hypothetical protein [Ricinus communis]
           gi|223528338|gb|EEF30380.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 273

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 53/135 (39%), Positives = 74/135 (54%)
 Frame = -2

Query: 472 LWTKPAINKLKVNIDAAVFENEGKYGFGGVVRDHLGRFVSAISGLREGMVLPEVAEGIAL 293
           +WT P    LK NID  VF    + GFG + ++  G F +A +GL  G + P+VAE ++L
Sbjct: 128 IWTCPVEGWLKCNIDVVVFVANNRLGFGFIFQNDSGTFRAATNGLISGPLDPQVAEALSL 187

Query: 292 KEVLSWLKSQARASYQVESDCLVLVQAIRNSEIMKSTFGGIVQDCKDVLNSWSEVDLHFV 113
           +E L W+K         ESDCL LV A+    +  S FG ++ DC+  L   +   + FV
Sbjct: 188 REDLCWVKGLDLNYVVSESDCLTLVNAVNKVGVNSSLFGLLIGDCRSFLKEMNHAHIVFV 247

Query: 112 KRSANRVAHHTARAS 68
           KR  NRVAH  AR +
Sbjct: 248 KRFGNRVAHLLARVT 262


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 59/176 (33%), Positives = 93/176 (52%)
 Frame = -2

Query: 595 RKCSAAQVVGNAIFMFEQWKKAQVSILYPSVSSWYMTEGYELWTKPAINKLKVNIDAAVF 416
           +K S   V   A     QW KA+    Y  +   +   G  LW KPA  K K+N+DA+  
Sbjct: 302 KKLSWRAVASRASSFLFQWGKARKLTDYHQLGR-HFAGGDCLWQKPATGKYKLNVDASSS 360

Query: 415 ENEGKYGFGGVVRDHLGRFVSAISGLREGMVLPEVAEGIALKEVLSWLKSQARASYQVES 236
              GK G   V+RD+ G +++ +  +R  +  P+VAE  ALKE LSW+ ++     Q+E+
Sbjct: 361 AERGKSGASFVLRDNAGIWITGVLIIRPYIANPDVAEAWALKEALSWIHAKGMEEVQIET 420

Query: 235 DCLVLVQAIRNSEIMKSTFGGIVQDCKDVLNSWSEVDLHFVKRSANRVAHHTARAS 68
           DCL  ++ +       S    +++DC+D+L   +  +L FV  SAN VAH  ++A+
Sbjct: 421 DCLRNIELLEEELHPNSYLLCLLKDCQDLLRVLNRCNLVFVYGSANTVAHMISKAT 476