BLASTX nr result

ID: Bupleurum21_contig00019483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019483
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514876.1| transcription factor, putative [Ricinus comm...   116   7e-24
ref|XP_002297855.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
ref|XP_002304668.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [...   102   1e-19
ref|XP_002512905.1| transcription factor, putative [Ricinus comm...   101   2e-19

>ref|XP_002514876.1| transcription factor, putative [Ricinus communis]
           gi|223545927|gb|EEF47430.1| transcription factor,
           putative [Ricinus communis]
          Length = 302

 Score =  116 bits (291), Expect = 7e-24
 Identities = 69/159 (43%), Positives = 96/159 (60%), Gaps = 15/159 (9%)
 Frame = -2

Query: 928 AASLHSRLDELG-----QGRATWN--GTNFNRSSV---FWPS-LAGFGSGFATNSGIQTS 782
           +A LHS+++ +G     + RA W    +N  R +V    WPS + G G+G+ +NS     
Sbjct: 143 SAGLHSKMEGIGPSVGSRDRANWTMMNSNLGRCNVTNGMWPSSVGGIGAGYISNSSQSAM 202

Query: 781 NQGNDHNLNLISKFGFHGFEFANSSLNSTNIAATLFNGTGQQLPGLELGLSQDGHNGVFS 602
           N GN+ + N + KFGFHG E  N ++   +  + +FN T QQ+PGLELGLSQDGH GV +
Sbjct: 203 NFGNE-SANALPKFGFHGVELPNINMGLMSFYS-MFNATNQQVPGLELGLSQDGHTGVMN 260

Query: 601 SQTISQLYQQMGQDTSSPLNIXXXXQHS----DKDDSQG 497
           SQ +SQ YQQMGQ+ +   ++    QH     DKDDSQG
Sbjct: 261 SQALSQFYQQMGQNRTGLNSLVQQQQHQQQPPDKDDSQG 299


>ref|XP_002297855.1| predicted protein [Populus trichocarpa] gi|222845113|gb|EEE82660.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  114 bits (286), Expect = 2e-23
 Identities = 69/158 (43%), Positives = 94/158 (59%), Gaps = 14/158 (8%)
 Frame = -2

Query: 928 AASLHSRLDELG------QGRATWN--GTNFNRSSV---FWPSLAGFGSGFATNSGIQTS 782
           +  LH++++ LG      + R  W    TN  RS+V    WPS+ G GSGF  NSG  TS
Sbjct: 144 STGLHTKMEGLGPAVVGSRDRTNWTMMNTNLGRSNVASGVWPSVGGIGSGFVPNSGQSTS 203

Query: 781 NQGNDHNLNLISKFGFHGFEFANSSLNSTNIAATLFNGTGQQLPGLELGLSQDGHNGVFS 602
           N GN+++  L  K+GFHG EF N ++   +  + +F+GT QQ PGLELGLSQDGH G+F+
Sbjct: 204 NFGNENSTTL-PKYGFHGVEFPNINMGLMSFYS-MFSGTNQQFPGLELGLSQDGHGGMFN 261

Query: 601 SQTISQLYQQM--GQDTSSPLNIXXXXQH-SDKDDSQG 497
            Q ++   QQM  G+   + LN     +   DKDDSQG
Sbjct: 262 PQALNPFCQQMVQGRGVLNSLNQEQQQEQPHDKDDSQG 299


>ref|XP_002304668.1| predicted protein [Populus trichocarpa] gi|222842100|gb|EEE79647.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  105 bits (263), Expect = 1e-20
 Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 14/158 (8%)
 Frame = -2

Query: 928 AASLHSRLDELGQG------RATWNGTNF-----NRSSVFWPSLAGFGSGFATNSGIQTS 782
           +  LH++++ LG G      R  W  +N      N ++  WPS+ G G GF  NSG  TS
Sbjct: 144 STGLHAKMEGLGPGVTGSRDRNDWTLSNTKLGISNVATGVWPSVGGIGLGFVPNSGQSTS 203

Query: 781 NQGNDHNLNLISKFGFHGFEFANSSLNSTNIAATLFNGTGQQLPGLELGLSQDGHNGVFS 602
           N GN+ N + + K+GF G EF N ++   +  + +F+GT QQLPGLELGLSQDGH+ + +
Sbjct: 204 NFGNE-NSSTLPKYGFQGVEFPNINMGLMSFYS-MFSGTNQQLPGLELGLSQDGHSAMLN 261

Query: 601 SQTISQLYQQM--GQDTSSPLNIXXXXQH-SDKDDSQG 497
            Q +S  Y QM  G+     LN     +   DKDDSQG
Sbjct: 262 PQALSPFYHQMVQGRGVLDSLNQEKQQEQPPDKDDSQG 299


>ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [Vitis vinifera]
          Length = 296

 Score =  102 bits (254), Expect = 1e-19
 Identities = 60/134 (44%), Positives = 81/134 (60%), Gaps = 12/134 (8%)
 Frame = -2

Query: 928 AASLHSRLDELG-------QGRATWN--GTNFNRSSV---FWPSLAGFGSGFATNSGIQT 785
           +A LH ++DELG         R +W   G N  R  V    WP ++GFG  F ++SG  T
Sbjct: 135 SAGLHQKIDELGGSSIGSGSSRTSWAMVGANLGRPHVATGLWPPVSGFG--FQSSSGPST 192

Query: 784 SNQGNDHNLNLISKFGFHGFEFANSSLNSTNIAATLFNGTGQQLPGLELGLSQDGHNGVF 605
           +N GN+ + N + K  F GF+   ++L   +  + L  G+ QQLPGLELGLSQDGH GV 
Sbjct: 193 TNLGNESS-NYLQKIAFPGFDLPATNLGPMSFTSIL-GGSNQQLPGLELGLSQDGHIGVL 250

Query: 604 SSQTISQLYQQMGQ 563
           +SQ +SQ+YQQMGQ
Sbjct: 251 NSQALSQIYQQMGQ 264


>ref|XP_002512905.1| transcription factor, putative [Ricinus communis]
           gi|223547916|gb|EEF49408.1| transcription factor,
           putative [Ricinus communis]
          Length = 320

 Score =  101 bits (252), Expect = 2e-19
 Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 16/162 (9%)
 Frame = -2

Query: 928 AASLHSRLDELG--------QGRATWN--GTNFNR-----SSVFWPSLAGFG-SGFATNS 797
           +A LH ++D+LG          R +W   G N  R     ++  WP + GFG    +T +
Sbjct: 159 SAGLHQKIDDLGGSSSITSSNSRTSWAMVGGNLGRPHHVATTGLWPPVGGFGFQSSSTTT 218

Query: 796 GIQTSNQGNDHNLNLISKFGFHGFEFANSSLNSTNIAATLFNGTGQQLPGLELGLSQDGH 617
           G  TSN GN+ + + + K GF GF+   +++   +  + L   + QQ+PGLELGLSQDGH
Sbjct: 219 GPVTSNLGNESS-SYLQKIGFPGFDLPGNNMGPMSFTSILGGTSNQQIPGLELGLSQDGH 277

Query: 616 NGVFSSQTISQLYQQMGQDTSSPLNIXXXXQHSDKDDSQG*G 491
            GV +SQ  SQ+YQQMGQ      +     Q+  KDDSQG G
Sbjct: 278 IGVLNSQAFSQIYQQMGQARVQHQHQHQHQQNPAKDDSQGSG 319


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