BLASTX nr result

ID: Bupleurum21_contig00019467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019467
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266783.1| PREDICTED: scarecrow-like protein 22-like [V...    76   3e-12
ref|XP_002329873.1| GRAS family transcription factor [Populus tr...    72   5e-11
ref|XP_002304419.1| GRAS family transcription factor [Populus tr...    67   1e-09
ref|XP_002528940.1| conserved hypothetical protein [Ricinus comm...    65   6e-09
gb|AAM90848.1|AF481952_1 hairy meristem [Petunia x hybrida]            57   1e-06

>ref|XP_002266783.1| PREDICTED: scarecrow-like protein 22-like [Vitis vinifera]
          Length = 814

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 48/113 (42%), Positives = 63/113 (55%), Gaps = 21/113 (18%)
 Frame = -1

Query: 413 LISENTMNHKWPDSV-LENEQE-------GGGRKDQWVGELQPISGG---------GSPQ 285
           L+S+N +  KWP S+ LE           GG RKD+W  ELQPI+ G         G  +
Sbjct: 86  LVSDNCLQ-KWPVSLPLETNPPDPGGVCGGGSRKDEWAAELQPITSGLVELVAGGAGEER 144

Query: 284 RFGHGIGMENWESWLSDSAS----QDQPSLRWISGDVDETPLSLKQLLLAGNN 138
             G G+G+E+WES LS+SA+     +Q  L WISGDVD+    LK LL +G N
Sbjct: 145 CGGLGLGLEDWESMLSESAAASPGHEQSLLGWISGDVDDPSFGLKHLLQSGGN 197


>ref|XP_002329873.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222871110|gb|EEF08241.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 777

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/70 (54%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
 Frame = -1

Query: 341 RKDQWVGELQPISGGGSPQRFGH--GIGMENWESWLSDSASQDQPSLRWISGDVDETPLS 168
           RKD+W  ELQPI  G      G   G+G+E+WE+ LS+  SQ+Q  LRWI+GDVD+T   
Sbjct: 101 RKDEWATELQPIPSGLEFVSSGARCGLGLEDWENMLSEP-SQEQSFLRWIAGDVDDTQFG 159

Query: 167 LKQLLLAGNN 138
           LKQLL +GNN
Sbjct: 160 LKQLLQSGNN 169


>ref|XP_002304419.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841851|gb|EEE79398.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 777

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
 Frame = -1

Query: 341 RKDQWVGELQPISGGGSPQRFGH--GIGMENWESWLSDSASQDQPSLRWISGDVDETPLS 168
           RKD+W  ELQP   G      G   G+G+E+WE+ LS+  SQ+Q  LRWI+GDVD+T   
Sbjct: 97  RKDEWATELQPFPSGLEFVSTGERCGLGLEDWENMLSEP-SQEQSLLRWIAGDVDDTQFG 155

Query: 167 LKQLLLAGNN 138
           LKQLL +G++
Sbjct: 156 LKQLLQSGSS 165


>ref|XP_002528940.1| conserved hypothetical protein [Ricinus communis]
           gi|223531642|gb|EEF33469.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 787

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 3/73 (4%)
 Frame = -1

Query: 341 RKDQWVGELQPISGG---GSPQRFGHGIGMENWESWLSDSASQDQPSLRWISGDVDETPL 171
           RKD+W  ELQPI  G    + +R G  +G+E+WE+  S+  +Q+Q  LRWI+GDVDE+  
Sbjct: 114 RKDEWATELQPIPSGLEISAGERCG--VGLEDWENMFSEP-NQEQSLLRWIAGDVDES-F 169

Query: 170 SLKQLLLAGNNSG 132
            L+QLL  GNN G
Sbjct: 170 GLRQLLQGGNNPG 182


>gb|AAM90848.1|AF481952_1 hairy meristem [Petunia x hybrida]
          Length = 721

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
 Frame = -1

Query: 344 GRKDQWVGELQPISGGG-SPQRFGHGIGMENWESWLSDSASQDQPSLRWISGDVDETPLS 168
           G+K++ V ELQP    G  P++   G G  + ++ L +    DQ  LRWISGD+++  +S
Sbjct: 91  GQKEELVKELQPFPLVGLEPEKCSLGFG--DLDNLLPELCGADQTLLRWISGDMEDPSVS 148

Query: 167 LKQLLLAGNNSGIDDTSSME 108
           LKQLLL GN +G   +S  E
Sbjct: 149 LKQLLLGGNANGFHGSSGFE 168


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