BLASTX nr result

ID: Bupleurum21_contig00019445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019445
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis] gi...   173   2e-41
ref|XP_002327435.1| predicted protein [Populus trichocarpa] gi|2...   168   7e-40
ref|XP_002884994.1| hypothetical protein ARALYDRAFT_478791 [Arab...   167   1e-39
ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   167   1e-39
ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   166   3e-39

>ref|XP_002527405.1| Protein SEY1, putative [Ricinus communis]
           gi|223533215|gb|EEF34971.1| Protein SEY1, putative
           [Ricinus communis]
          Length = 813

 Score =  173 bits (439), Expect = 2e-41
 Identities = 83/112 (74%), Positives = 95/112 (84%)
 Frame = -1

Query: 572 YTVTQAIAAQEASKRSNNWLPPPWAIVAIILLGFNEFMTLLRNPXXXXXXXXXXXLAKAL 393
           Y+VTQAI+AQEA+KR+NNWLPPPWAIVA+++LGFNEFMTLLRNP           L KAL
Sbjct: 662 YSVTQAISAQEANKRNNNWLPPPWAIVALVVLGFNEFMTLLRNPLYLGFIFVVFLLVKAL 721

Query: 392 WVQLDISGEFRNGPLPGLLSLSTKFLPTVMNLLKKLAEEGQVPKPSDNQRNP 237
           WVQLD+SGEFRNG LPGL+SLSTKFLPT+MNL+KKLAEEGQ P  +D QRNP
Sbjct: 722 WVQLDVSGEFRNGALPGLISLSTKFLPTIMNLIKKLAEEGQKPATNDPQRNP 773


>ref|XP_002327435.1| predicted protein [Populus trichocarpa] gi|222835989|gb|EEE74410.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  168 bits (425), Expect = 7e-40
 Identities = 82/111 (73%), Positives = 93/111 (83%)
 Frame = -1

Query: 572 YTVTQAIAAQEASKRSNNWLPPPWAIVAIILLGFNEFMTLLRNPXXXXXXXXXXXLAKAL 393
           YTVTQAI+AQEA KR+NNWLPPPWAI+A+++LGFNEFMTLLRNP           L KAL
Sbjct: 567 YTVTQAISAQEAHKRNNNWLPPPWAILALVVLGFNEFMTLLRNPLYLGVIFVGFLLIKAL 626

Query: 392 WVQLDISGEFRNGPLPGLLSLSTKFLPTVMNLLKKLAEEGQVPKPSDNQRN 240
           WVQLDISGEFRNG LPGLLSLS+KF+PT+MNLLK+LAEEGQ P  +D QRN
Sbjct: 627 WVQLDISGEFRNGALPGLLSLSSKFVPTIMNLLKRLAEEGQKPATADPQRN 677


>ref|XP_002884994.1| hypothetical protein ARALYDRAFT_478791 [Arabidopsis lyrata subsp.
           lyrata] gi|297330834|gb|EFH61253.1| hypothetical protein
           ARALYDRAFT_478791 [Arabidopsis lyrata subsp. lyrata]
          Length = 803

 Score =  167 bits (423), Expect = 1e-39
 Identities = 80/109 (73%), Positives = 93/109 (85%)
 Frame = -1

Query: 572 YTVTQAIAAQEASKRSNNWLPPPWAIVAIILLGFNEFMTLLRNPXXXXXXXXXXXLAKAL 393
           YTVTQAI+AQEA++R+NNWLPPPWAI+A+++LGFNEFMTLLRNP           ++KAL
Sbjct: 658 YTVTQAISAQEANRRNNNWLPPPWAILALVVLGFNEFMTLLRNPLWLLVLFVGYLISKAL 717

Query: 392 WVQLDISGEFRNGPLPGLLSLSTKFLPTVMNLLKKLAEEGQVPKPSDNQ 246
           WVQL+ISGEFRNG LPGLLSLSTKF+PTVMNLLKKLAEEGQ P  + NQ
Sbjct: 718 WVQLNISGEFRNGALPGLLSLSTKFIPTVMNLLKKLAEEGQAPPTNSNQ 766


>ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine max]
          Length = 808

 Score =  167 bits (422), Expect = 1e-39
 Identities = 84/143 (58%), Positives = 103/143 (72%), Gaps = 6/143 (4%)
 Frame = -1

Query: 572  YTVTQAIAAQEASKRSNNWLPPPWAIVAIILLGFNEFMTLLRNPXXXXXXXXXXXLAKAL 393
            Y+V+QAI+AQEA+KR+NNWLPPPWAIVA+++LGFNEFMTLLRNP           L KAL
Sbjct: 662  YSVSQAISAQEANKRNNNWLPPPWAIVALVILGFNEFMTLLRNPLYLGVIFVGFLLIKAL 721

Query: 392  WVQLDISGEFRNGPLPGLLSLSTKFLPTVMNLLKKLAEEGQVPKPSDNQRNP------XX 231
            WVQLD+SGEFRNG LPG++SLS+KF+PT+MNL+KKLAEEGQ P  ++ QR P        
Sbjct: 722  WVQLDVSGEFRNGALPGIISLSSKFIPTIMNLMKKLAEEGQNPAANNPQRTPSKSSYNEG 781

Query: 230  XXXXXXXXXXXXXXENGTEYSSP 162
                          +NGTEY+SP
Sbjct: 782  HAVSSSASSNLTRLDNGTEYASP 804


>ref|XP_003531616.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine max]
          Length = 808

 Score =  166 bits (420), Expect = 3e-39
 Identities = 84/147 (57%), Positives = 104/147 (70%), Gaps = 6/147 (4%)
 Frame = -1

Query: 572  YTVTQAIAAQEASKRSNNWLPPPWAIVAIILLGFNEFMTLLRNPXXXXXXXXXXXLAKAL 393
            Y+V+QAI+AQEA+KR+NNWLPPPWAIVA+++LGFNEFMTLLRNP           L KAL
Sbjct: 662  YSVSQAISAQEANKRNNNWLPPPWAIVALVILGFNEFMTLLRNPLYLGVIFVGFLLIKAL 721

Query: 392  WVQLDISGEFRNGPLPGLLSLSTKFLPTVMNLLKKLAEEGQVPKPSDNQRNP------XX 231
            WVQLD+SGEFRNG LPG++SLS+KF+PT+MNL++KLAEEGQ P  ++ QR P        
Sbjct: 722  WVQLDVSGEFRNGALPGIISLSSKFIPTIMNLMRKLAEEGQNPAANNPQRTPSKNSYNDG 781

Query: 230  XXXXXXXXXXXXXXENGTEYSSPAARE 150
                          +NGTEY+SP   E
Sbjct: 782  HAVSSSASSNLTALDNGTEYASPLKDE 808


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