BLASTX nr result

ID: Bupleurum21_contig00019440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019440
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262626.2| PREDICTED: importin-11-like [Vitis vinifera]      167   8e-40
emb|CBI18252.3| unnamed protein product [Vitis vinifera]              167   8e-40
ref|XP_002323597.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002530502.1| importin, putative [Ricinus communis] gi|223...   152   3e-35
ref|XP_002884706.1| hypothetical protein ARALYDRAFT_317700 [Arab...   152   4e-35

>ref|XP_002262626.2| PREDICTED: importin-11-like [Vitis vinifera]
          Length = 1011

 Score =  167 bits (423), Expect = 8e-40
 Identities = 82/96 (85%), Positives = 89/96 (92%)
 Frame = -3

Query: 290 MYTLLSNSLSGDDSVRKPAEAALSQSENRPGFCFCLLEVITAKDLVAQSDVRLLASVYFK 111
           MY+LL+NSLS D+SVRKPAEAALSQSE+RPGFC CL+EVITAKDL AQ DVRL+ASVYFK
Sbjct: 11  MYSLLTNSLSADESVRKPAEAALSQSESRPGFCSCLMEVITAKDLAAQVDVRLMASVYFK 70

Query: 110 NSVSRYWRTRRDSSGISNEEKIHLRQKLLAHLREEN 3
           N V+RYWR RRDSSGISNEEKIHLRQKLL HLREEN
Sbjct: 71  NGVNRYWRNRRDSSGISNEEKIHLRQKLLLHLREEN 106


>emb|CBI18252.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  167 bits (423), Expect = 8e-40
 Identities = 82/96 (85%), Positives = 89/96 (92%)
 Frame = -3

Query: 290 MYTLLSNSLSGDDSVRKPAEAALSQSENRPGFCFCLLEVITAKDLVAQSDVRLLASVYFK 111
           MY+LL+NSLS D+SVRKPAEAALSQSE+RPGFC CL+EVITAKDL AQ DVRL+ASVYFK
Sbjct: 11  MYSLLTNSLSADESVRKPAEAALSQSESRPGFCSCLMEVITAKDLAAQVDVRLMASVYFK 70

Query: 110 NSVSRYWRTRRDSSGISNEEKIHLRQKLLAHLREEN 3
           N V+RYWR RRDSSGISNEEKIHLRQKLL HLREEN
Sbjct: 71  NGVNRYWRNRRDSSGISNEEKIHLRQKLLLHLREEN 106


>ref|XP_002323597.1| predicted protein [Populus trichocarpa] gi|222868227|gb|EEF05358.1|
           predicted protein [Populus trichocarpa]
          Length = 962

 Score =  156 bits (394), Expect = 2e-36
 Identities = 75/96 (78%), Positives = 88/96 (91%)
 Frame = -3

Query: 290 MYTLLSNSLSGDDSVRKPAEAALSQSENRPGFCFCLLEVITAKDLVAQSDVRLLASVYFK 111
           +Y+LL+NS+SGD+SVRKPAEAALSQ E+RPGFC CL+EVITA DL +Q DVRLLASVYFK
Sbjct: 11  IYSLLTNSMSGDESVRKPAEAALSQFESRPGFCSCLMEVITAADLASQVDVRLLASVYFK 70

Query: 110 NSVSRYWRTRRDSSGISNEEKIHLRQKLLAHLREEN 3
           NS++RYWR RRDS+ IS+EEK HLRQKLL+HLREEN
Sbjct: 71  NSINRYWRNRRDSAAISSEEKNHLRQKLLSHLREEN 106


>ref|XP_002530502.1| importin, putative [Ricinus communis] gi|223529959|gb|EEF31886.1|
           importin, putative [Ricinus communis]
          Length = 1011

 Score =  152 bits (384), Expect = 3e-35
 Identities = 73/96 (76%), Positives = 87/96 (90%)
 Frame = -3

Query: 290 MYTLLSNSLSGDDSVRKPAEAALSQSENRPGFCFCLLEVITAKDLVAQSDVRLLASVYFK 111
           +Y++L+NS+SGD  VR PAE ALS+ E+RPGFC CL+EVITAKDLV+Q DVRLLASVYFK
Sbjct: 11  IYSMLTNSMSGDQRVRGPAETALSEFESRPGFCSCLMEVITAKDLVSQIDVRLLASVYFK 70

Query: 110 NSVSRYWRTRRDSSGISNEEKIHLRQKLLAHLREEN 3
           NS++RYWR RRDSSGIS+EEK HLRQKLL++LREEN
Sbjct: 71  NSINRYWRNRRDSSGISSEEKNHLRQKLLSYLREEN 106


>ref|XP_002884706.1| hypothetical protein ARALYDRAFT_317700 [Arabidopsis lyrata subsp.
           lyrata] gi|297330546|gb|EFH60965.1| hypothetical protein
           ARALYDRAFT_317700 [Arabidopsis lyrata subsp. lyrata]
          Length = 1010

 Score =  152 bits (383), Expect = 4e-35
 Identities = 71/96 (73%), Positives = 88/96 (91%)
 Frame = -3

Query: 290 MYTLLSNSLSGDDSVRKPAEAALSQSENRPGFCFCLLEVITAKDLVAQSDVRLLASVYFK 111
           MYTLL+NS+SGD++VR+PAEAALSQSE+RPGFC CL+EVI +KDLV+  DVRL+ASVYFK
Sbjct: 11  MYTLLANSMSGDETVRRPAEAALSQSESRPGFCSCLMEVIASKDLVSHVDVRLMASVYFK 70

Query: 110 NSVSRYWRTRRDSSGISNEEKIHLRQKLLAHLREEN 3
           NS++R+W+ RR+S  +SNEEK HLRQKLL+HLREEN
Sbjct: 71  NSINRHWKNRRNSWSMSNEEKSHLRQKLLSHLREEN 106


Top