BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019439
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containi...   402   e-110
emb|CBI17575.3| unnamed protein product [Vitis vinifera]              394   e-107
ref|XP_002525094.1| pentatricopeptide repeat-containing protein,...   382   e-103
ref|XP_003524343.1| PREDICTED: pentatricopeptide repeat-containi...   359   7e-97
ref|XP_003532540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   357   2e-96

>ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like
            [Vitis vinifera]
          Length = 519

 Score =  402 bits (1034), Expect = e-110
 Identities = 208/363 (57%), Positives = 272/363 (74%), Gaps = 2/363 (0%)
 Frame = -2

Query: 1177 VKEATEVYKEMIRAGCPPNCYTYTVLMEHLAVTGKFNEVIEIFNKMQEAGVQPDKAACNI 998
            VKEA +VYKEM+++GC PNCYTYTVLMEHL  +GK+   +EIF++MQEAGVQPDKA CNI
Sbjct: 152  VKEAADVYKEMLQSGCAPNCYTYTVLMEHLTGSGKYKAALEIFSRMQEAGVQPDKATCNI 211

Query: 997  LIEKCCTAGETRALTRILEYMKENSLVLRKAVYVEAQETLRKVGESEGLLRQVNPHLSSE 818
            LIEK C  G+T A+T+IL YMK+N LVLR  VY+EA +TL+  GES+ LLRQVNPHL+  
Sbjct: 212  LIEKFCKTGQTWAITQILLYMKDNFLVLRYPVYLEALQTLKVAGESDILLRQVNPHLNVG 271

Query: 817  CIHKE--IDSLDTITNEACSVDQELIVDLLTKKKFGMVDYLLYEMMETNFQLHSEIISTI 644
               KE  ++  +T+ +   ++D+  ++  LTK+ F  +D LL  M+  N +L S IIS I
Sbjct: 272  LSSKEEIVEFKETVADVHSTIDRGFVLLFLTKQNFYAIDCLLTGMIHKNTRLDSVIISQI 331

Query: 643  IDVYSTHCRLEGALLAFKYSVEKGVVLKKTAYLSLIGVYIRTNSFPKVVEIVNEMIRAGH 464
            I+V   HCR+ GALLAF+YSV+ G+ +++ AYL+L+GV+IR NSFPKV +IV +M+RAG 
Sbjct: 332  IEVNCAHCRINGALLAFEYSVKMGINIERIAYLALMGVFIRANSFPKVADIVEKMVRAGI 391

Query: 463  SLGTHLSALLIYKLGSAGKPVLAAEIFELLPNDQKRTAAYTALISAYFSCGNTDKGLQTF 284
            SLG +L ALLIY+LG A +P  AA++F LLP+DQK TAAYTALISAYFS GN DKGL+ +
Sbjct: 392  SLGMYLGALLIYRLGCARRPGSAAKVFGLLPDDQKGTAAYTALISAYFSSGNVDKGLKIY 451

Query: 283  EIMRTKGIPSALGTYNVLLSGLERCGKVCELEIYRKEKKSLQAATKFQHQLPAEEMICNL 104
            + M+ K I  ALGTYN+LL+GLE+ G+  E EIYRKEKK+L      Q  +  +E ICNL
Sbjct: 452  KTMQRKRIHPALGTYNLLLAGLEKKGRAREAEIYRKEKKTLHTHGHSQDIVSMDEKICNL 511

Query: 103  LFT 95
            LF+
Sbjct: 512  LFS 514


>emb|CBI17575.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  394 bits (1012), Expect = e-107
 Identities = 208/374 (55%), Positives = 272/374 (72%), Gaps = 13/374 (3%)
 Frame = -2

Query: 1177 VKEATEVYKEMIRAGCPPNCYTYTVLMEHLAVTGK-----------FNEVIEIFNKMQEA 1031
            VKEA +VYKEM+++GC PNCYTYTVLMEHL  +GK           +   +EIF++MQEA
Sbjct: 278  VKEAADVYKEMLQSGCAPNCYTYTVLMEHLTGSGKHLLQFSCIACKYKAALEIFSRMQEA 337

Query: 1030 GVQPDKAACNILIEKCCTAGETRALTRILEYMKENSLVLRKAVYVEAQETLRKVGESEGL 851
            GVQPDKA CNILIEK C  G+T A+T+IL YMK+N LVLR  VY+EA +TL+  GES+ L
Sbjct: 338  GVQPDKATCNILIEKFCKTGQTWAITQILLYMKDNFLVLRYPVYLEALQTLKVAGESDIL 397

Query: 850  LRQVNPHLSSECIHKE--IDSLDTITNEACSVDQELIVDLLTKKKFGMVDYLLYEMMETN 677
            LRQVNPHL+     KE  ++  +T+ +   ++D+  ++  LTK+ F  +D LL  M+  N
Sbjct: 398  LRQVNPHLNVGLSSKEEIVEFKETVADVHSTIDRGFVLLFLTKQNFYAIDCLLTGMIHKN 457

Query: 676  FQLHSEIISTIIDVYSTHCRLEGALLAFKYSVEKGVVLKKTAYLSLIGVYIRTNSFPKVV 497
             +L S IIS II+V   HCR+ GALLAF+YSV+ G+ +++ AYL+L+GV+IR NSFPKV 
Sbjct: 458  TRLDSVIISQIIEVNCAHCRINGALLAFEYSVKMGINIERIAYLALMGVFIRANSFPKVA 517

Query: 496  EIVNEMIRAGHSLGTHLSALLIYKLGSAGKPVLAAEIFELLPNDQKRTAAYTALISAYFS 317
            +IV +M+RAG SLG +L ALLIY+LG A +P  AA++F LLP+DQK TAAYTALISAYFS
Sbjct: 518  DIVEKMVRAGISLGMYLGALLIYRLGCARRPGSAAKVFGLLPDDQKGTAAYTALISAYFS 577

Query: 316  CGNTDKGLQTFEIMRTKGIPSALGTYNVLLSGLERCGKVCELEIYRKEKKSLQAATKFQH 137
             GN DKGL+ ++ M+ K I  ALGTYN+LL+GLE+ G+  E EIYRKEKK+L      Q 
Sbjct: 578  SGNVDKGLKIYKTMQRKRIHPALGTYNLLLAGLEKKGRAREAEIYRKEKKTLHTHGHSQD 637

Query: 136  QLPAEEMICNLLFT 95
             +  +E ICNLLF+
Sbjct: 638  IVSMDEKICNLLFS 651


>ref|XP_002525094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535553|gb|EEF37221.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score =  382 bits (980), Expect = e-103
 Identities = 195/360 (54%), Positives = 262/360 (72%)
 Frame = -2

Query: 1177 VKEATEVYKEMIRAGCPPNCYTYTVLMEHLAVTGKFNEVIEIFNKMQEAGVQPDKAACNI 998
            VKEAT +YKEM+  G PPNC+TYTVLME+L V+GK  E +EIF KMQEAGVQPDKA CNI
Sbjct: 107  VKEATNIYKEMLECGIPPNCHTYTVLMEYLVVSGKCQEALEIFKKMQEAGVQPDKAMCNI 166

Query: 997  LIEKCCTAGETRALTRILEYMKENSLVLRKAVYVEAQETLRKVGESEGLLRQVNPHLSSE 818
            L+E+CC AGET  +T IL+YMKEN L LR  +++EA + LR  GE + LL+QVNPH ++E
Sbjct: 167  LVERCCEAGETNTMTPILQYMKENHLALRYPIFLEALKILRIAGECDALLKQVNPHCAAE 226

Query: 817  CIHKEIDSLDTITNEACSVDQELIVDLLTKKKFGMVDYLLYEMMETNFQLHSEIISTIID 638
             I+ +  S  T +     +D+ L++ LL K+    VD+LL  +++ N  L S I+STII+
Sbjct: 227  SINNDDSSEFTTSAYNDPIDKGLLLILLRKQNLVAVDHLLAGVLDKNMVLESWIVSTIIE 286

Query: 637  VYSTHCRLEGALLAFKYSVEKGVVLKKTAYLSLIGVYIRTNSFPKVVEIVNEMIRAGHSL 458
            V  + CR + AL+AF+YS+  G+ L++TAYL+LIG+ IR+N+   V+EIV E IR GHSL
Sbjct: 287  VNCSQCRPDSALMAFEYSMRVGIDLERTAYLALIGIMIRSNTSLWVLEIVKETIRVGHSL 346

Query: 457  GTHLSALLIYKLGSAGKPVLAAEIFELLPNDQKRTAAYTALISAYFSCGNTDKGLQTFEI 278
            G +LSALLI++LGSA +P  AA+IF+LLP++QK TA YTA+I  YFS G+  K L+ ++ 
Sbjct: 347  GLYLSALLIHRLGSARRPNCAAKIFDLLPDEQKCTATYTAMIGVYFSAGSAAKALKIYKT 406

Query: 277  MRTKGIPSALGTYNVLLSGLERCGKVCELEIYRKEKKSLQAATKFQHQLPAEEMICNLLF 98
            M+   I  +LGTYNVLL+GLE+ G+VCE + +RKEK+SL A       LP EE IC+LLF
Sbjct: 407  MKKNSINPSLGTYNVLLAGLEKSGRVCETDNFRKEKRSLMADGNRLSCLPMEEKICDLLF 466


>ref|XP_003524343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like
            [Glycine max]
          Length = 585

 Score =  359 bits (922), Expect = 7e-97
 Identities = 195/366 (53%), Positives = 257/366 (70%), Gaps = 5/366 (1%)
 Frame = -2

Query: 1177 VKEATEVYKEMIRAGCPPNCYTYTVLMEHLAVTGKFNEVIEIFNKMQEAGVQPDKAACNI 998
            VKEAT  YKEMI +   PNC+TYTVLM++L  +G++ E +EIF KMQEAG QPDKAACNI
Sbjct: 216  VKEATRAYKEMISSRVAPNCHTYTVLMDYLIGSGQYKEALEIFEKMQEAGAQPDKAACNI 275

Query: 997  LIEKCCTAGETRALTRILEYMKENSLVLRKAVYVEAQETLRKVGESEGLLRQVNPHLSSE 818
            LIE+C   G T  +T IL+YMKEN LVLR  V+V+A E L+  GES+ LLRQVNP    +
Sbjct: 276  LIERCSKVGGTEFMTHILQYMKENRLVLRYPVFVKALEALKIAGESDTLLRQVNPQFYMD 335

Query: 817  CIHKEIDSLDTITNEA---CSVDQELIVDLLTKKKFGMVDYLLYEMMETNFQLHSEIIST 647
            CI ++  S +TIT  A    ++D+EL+  LL  +    +D+LL  MM+    L  +++ST
Sbjct: 336  CIIRKKAS-NTITVAADCPTNIDKELLFVLLKNRNVVAIDHLLTGMMDKKISLDHKVVST 394

Query: 646  IIDVYSTHCRLEGALLAFKYSVEKGVVLKKTAYLSLIGVYIRTNSFPKVVEIVNEMIRAG 467
            II+V  +HCR EGALLAFKYSV  G+ +++T YLSLIG+ IR+N F K+ EIV +M RAG
Sbjct: 395  IIEVNCSHCRPEGALLAFKYSVTMGISIERTGYLSLIGLLIRSNMFSKLAEIVEKMTRAG 454

Query: 466  HSLGTHLSALLIYKLGSAGKPVLAAEIFELLPNDQKRTAAYTALISAYFSCGNTDKGLQT 287
            HSLG +L++LLI++LG A K  LA +IF LLP++ K +A YTALIS YFS    ++ L+ 
Sbjct: 455  HSLGIYLASLLIFRLGCARKHTLAMKIFNLLPDNHKCSATYTALISVYFSVRRVNEALEI 514

Query: 286  FEIMRTKGIPSALGTYNVLLSGLERCGKVCELEIYRKEK--KSLQAATKFQHQLPAEEMI 113
            ++IM +KG    LGTY+VL++GLER GK  E E YRK K  KSL+A +  Q  +  E  I
Sbjct: 515  YKIMCSKGFCPVLGTYDVLIAGLERNGKYAEAEHYRKAKKRKSLRANSGSQESVCIEGKI 574

Query: 112  CNLLFT 95
            CNLLF+
Sbjct: 575  CNLLFS 580


>ref|XP_003532540.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g01390-like [Glycine max]
          Length = 545

 Score =  357 bits (917), Expect = 2e-96
 Identities = 194/366 (53%), Positives = 253/366 (69%), Gaps = 5/366 (1%)
 Frame = -2

Query: 1177 VKEATEVYKEMIRAGCPPNCYTYTVLMEHLAVTGKFNEVIEIFNKMQEAGVQPDKAACNI 998
            +KEAT VYKEMI +G  PNC+TYTVLM++L  +GK  E +EIF KMQEAG QPDKAACNI
Sbjct: 176  LKEATRVYKEMISSGVAPNCHTYTVLMDYLIASGKCKEALEIFEKMQEAGAQPDKAACNI 235

Query: 997  LIEKCCTAGETRALTRILEYMKENSLVLRKAVYVEAQETLRKVGESEGLLRQVNPHLSSE 818
            LI++C   G T  +T IL+YMKEN LVLR  V+VEA E L+  GE++ LLRQVNP    +
Sbjct: 236  LIQRCSKVGGTEFMTHILQYMKENRLVLRYPVFVEALEALKXSGETDTLLRQVNPQFYMD 295

Query: 817  CIHKEIDSLDTITNEA---CSVDQELIVDLLTKKKFGMVDYLLYEMMETNFQLHSEIIST 647
            C  ++ D+ ++IT  A    ++D EL+  LL  +    +D+LL  MM+    L  +++ST
Sbjct: 296  CSTRK-DASNSITVAADCPTNIDNELLFVLLKNRNVVAIDHLLTGMMDKKIYLEHKVVST 354

Query: 646  IIDVYSTHCRLEGALLAFKYSVEKGVVLKKTAYLSLIGVYIRTNSFPKVVEIVNEMIRAG 467
            II+V  +HCR +GALLAFKYSV  G+ +++T YLSLIG+ IR+N F K+VEIV EM RAG
Sbjct: 355  IIEVNCSHCRPKGALLAFKYSVTMGISIERTGYLSLIGLLIRSNMFSKLVEIVEEMTRAG 414

Query: 466  HSLGTHLSALLIYKLGSAGKPVLAAEIFELLPNDQKRTAAYTALISAYFSCGNTDKGLQT 287
            +SLGT+L++LL + LG A K  LA +IF LLP++ K TA +TALIS YFS     K L+ 
Sbjct: 415  YSLGTYLASLLXHXLGCAKKHTLAMKIFNLLPDNHKCTATFTALISVYFSVRRVTKALEI 474

Query: 286  FEIMRTKGIPSALGTYNVLLSGLERCGKVCELEIYRKEK--KSLQAATKFQHQLPAEEMI 113
            ++IM TKG    LGTY+VL++G E  GK  E E YRK K  KSL A +  Q  +  E  I
Sbjct: 475  YKIMCTKGFCPVLGTYDVLIAGFETNGKYAEAEHYRKAKKSKSLHANSGSQESVCIEGKI 534

Query: 112  CNLLFT 95
            CNLLF+
Sbjct: 535  CNLLFS 540