BLASTX nr result
ID: Bupleurum21_contig00019435
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00019435
(1006 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera] 246 8e-63
ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [... 245 1e-62
emb|CBI40396.3| unnamed protein product [Vitis vinifera] 245 1e-62
ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com... 206 7e-51
ref|XP_002301364.1| chromatin remodeling complex subunit [Populu... 196 1e-47
>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
Length = 2238
Score = 246 bits (627), Expect = 8e-63
Identities = 150/343 (43%), Positives = 200/343 (58%), Gaps = 9/343 (2%)
Frame = +1
Query: 4 KANETSMGSQSSLITMPKQQVTSPQVANESSPRXXXXXXXXXXXXXXKVIRQTGQPGPFN 183
K NE++MG+Q S + PKQQVTSP VA+E+SP K RQT P PF
Sbjct: 313 KPNESNMGAQPSPVQGPKQQVTSPPVASENSPHGNSSSDVSGQSGSAKA-RQTVPPSPFG 371
Query: 184 AS-TAALFHNANNNPAQSFSGRSSENQISSRQPTTINNGITPMHPPQSSLNLNQGVDQSV 360
++ AA+ +N NN P Q FS + E+Q+ RQ I NG++PMHPPQ S+N++QGVD +
Sbjct: 372 SNPNAAIVNNTNNIPVQQFSVQGRESQVPPRQSVVIGNGMSPMHPPQPSVNMSQGVDHPL 431
Query: 361 SGKSKLPGPEALQMQYSKPFXXXXXXXXXXXXEGVSLNPLSSQGRPVPQL-QQHLGFTKQ 537
K+ L G E+LQMQY + +G N SQG P+PQ+ QQ GFTKQ
Sbjct: 432 HAKNTLSGQESLQMQYLRQLNRSSPQSAVPPNDGGLGNHYQSQGGPLPQVPQQRFGFTKQ 491
Query: 538 QSHVLKAQILAFRRLKKGDGTLPRELLQAIAPPPLERQMLQMSQSGATI---MSSGKNAD 708
Q HVLKAQILAFRRLKKG+GTLP+ELL++IAPPPLE Q+ Q I S+GKN
Sbjct: 492 QLHVLKAQILAFRRLKKGEGTLPQELLRSIAPPPLESQLQQAFLPSTAINQDKSAGKN-- 549
Query: 709 TEDHLRRMECSEKDPHAVPLSAGPNNLKREAVIGDEKTSSRQI----VPALLKEPSSSVP 876
EDH R++E +EKD AVP + G N K EA GD+K + + P ++KEP +
Sbjct: 550 VEDHGRQLESNEKDSQAVPSTNGHNFSKEEAFAGDDKATPSTVHMPGAPTVMKEPIPVLS 609
Query: 877 SREXXXXXXXXXLATFSAKTEEGEEHGILEDAVTRSEMHVDKG 1005
+ + FS K+++ E GI + + RS+ D+G
Sbjct: 610 AGK-----EEPQTTAFSVKSDQEXERGIQKTPI-RSDFAPDRG 646
>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
Length = 2263
Score = 245 bits (625), Expect = 1e-62
Identities = 150/343 (43%), Positives = 200/343 (58%), Gaps = 9/343 (2%)
Frame = +1
Query: 4 KANETSMGSQSSLITMPKQQVTSPQVANESSPRXXXXXXXXXXXXXXKVIRQTGQPGPFN 183
K NE++MG+Q S + PKQQVTSP VA+E+SP K RQT P PF
Sbjct: 313 KPNESNMGAQPSPVQGPKQQVTSPPVASENSPHGNSSSDVSGQSGSAKA-RQTVPPSPFG 371
Query: 184 AS-TAALFHNANNNPAQSFSGRSSENQISSRQPTTINNGITPMHPPQSSLNLNQGVDQSV 360
++ AA+ +N NN P Q FS + E+Q+ RQ I NG++PMHPPQ S+N++QGVD +
Sbjct: 372 SNPNAAIVNNTNNIPVQQFSVQGRESQVPPRQSVVIGNGMSPMHPPQPSVNMSQGVDHPL 431
Query: 361 SGKSKLPGPEALQMQYSKPFXXXXXXXXXXXXEGVSLNPLSSQGRPVPQL-QQHLGFTKQ 537
K+ L G E+LQMQY + +G N SQG P+PQ+ QQ GFTKQ
Sbjct: 432 HAKNTLSGQESLQMQYLRQLNRSSPQSAVPPNDGGLGNHYQSQGGPLPQVPQQRFGFTKQ 491
Query: 538 QSHVLKAQILAFRRLKKGDGTLPRELLQAIAPPPLERQMLQMSQSGATI---MSSGKNAD 708
Q HVLKAQILAFRRLKKG+GTLP+ELL++IAPPPLE Q+ Q I S+GKN
Sbjct: 492 QLHVLKAQILAFRRLKKGEGTLPQELLRSIAPPPLESQLQQAFLPSTAINQDKSAGKN-- 549
Query: 709 TEDHLRRMECSEKDPHAVPLSAGPNNLKREAVIGDEKTSSRQI----VPALLKEPSSSVP 876
EDH R++E +EKD AVP + G N K EA GD+K + + P ++KEP +
Sbjct: 550 VEDHGRQLESNEKDSQAVPSTNGHNFSKEEAFAGDDKATPSTVHMPGAPTVMKEPIPVLS 609
Query: 877 SREXXXXXXXXXLATFSAKTEEGEEHGILEDAVTRSEMHVDKG 1005
+ + FS K+++ E GI + + RS+ D+G
Sbjct: 610 AGK-----EEPQTTAFSVKSDQEFERGIQKTPI-RSDFAPDRG 646
>emb|CBI40396.3| unnamed protein product [Vitis vinifera]
Length = 1981
Score = 245 bits (625), Expect = 1e-62
Identities = 150/343 (43%), Positives = 200/343 (58%), Gaps = 9/343 (2%)
Frame = +1
Query: 4 KANETSMGSQSSLITMPKQQVTSPQVANESSPRXXXXXXXXXXXXXXKVIRQTGQPGPFN 183
K NE++MG+Q S + PKQQVTSP VA+E+SP K RQT P PF
Sbjct: 313 KPNESNMGAQPSPVQGPKQQVTSPPVASENSPHGNSSSDVSGQSGSAKA-RQTVPPSPFG 371
Query: 184 AS-TAALFHNANNNPAQSFSGRSSENQISSRQPTTINNGITPMHPPQSSLNLNQGVDQSV 360
++ AA+ +N NN P Q FS + E+Q+ RQ I NG++PMHPPQ S+N++QGVD +
Sbjct: 372 SNPNAAIVNNTNNIPVQQFSVQGRESQVPPRQSVVIGNGMSPMHPPQPSVNMSQGVDHPL 431
Query: 361 SGKSKLPGPEALQMQYSKPFXXXXXXXXXXXXEGVSLNPLSSQGRPVPQL-QQHLGFTKQ 537
K+ L G E+LQMQY + +G N SQG P+PQ+ QQ GFTKQ
Sbjct: 432 HAKNTLSGQESLQMQYLRQLNRSSPQSAVPPNDGGLGNHYQSQGGPLPQVPQQRFGFTKQ 491
Query: 538 QSHVLKAQILAFRRLKKGDGTLPRELLQAIAPPPLERQMLQMSQSGATI---MSSGKNAD 708
Q HVLKAQILAFRRLKKG+GTLP+ELL++IAPPPLE Q+ Q I S+GKN
Sbjct: 492 QLHVLKAQILAFRRLKKGEGTLPQELLRSIAPPPLESQLQQAFLPSTAINQDKSAGKN-- 549
Query: 709 TEDHLRRMECSEKDPHAVPLSAGPNNLKREAVIGDEKTSSRQI----VPALLKEPSSSVP 876
EDH R++E +EKD AVP + G N K EA GD+K + + P ++KEP +
Sbjct: 550 VEDHGRQLESNEKDSQAVPSTNGHNFSKEEAFAGDDKATPSTVHMPGAPTVMKEPIPVLS 609
Query: 877 SREXXXXXXXXXLATFSAKTEEGEEHGILEDAVTRSEMHVDKG 1005
+ + FS K+++ E GI + + RS+ D+G
Sbjct: 610 AGK-----EEPQTTAFSVKSDQEFERGIQKTPI-RSDFAPDRG 646
>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
gi|223549062|gb|EEF50551.1| Chromo domain protein,
putative [Ricinus communis]
Length = 2248
Score = 206 bits (524), Expect = 7e-51
Identities = 137/342 (40%), Positives = 191/342 (55%), Gaps = 8/342 (2%)
Frame = +1
Query: 4 KANETSMGSQSSLI--TMPKQQVTSPQVANESSPRXXXXXXXXXXXXXXKVIRQTGQPGP 177
KANE++ G+Q+S + ++ K QV SP VA+ESSP K RQT GP
Sbjct: 306 KANESNAGAQASPVPVSVSKHQVASPPVASESSPHANSSSDVSGQSGPPKA-RQTVPSGP 364
Query: 178 FNAST-AALFHNANNNPAQSFSGRSSENQISSRQPTTINNGITPMHPPQSSLNLNQGVDQ 354
F +S+ + + ++AN+ Q + ++ ENQ R + NG+ MHP Q S N++QG DQ
Sbjct: 365 FGSSSNSGIVNSANSLAMQQLAFQNRENQAPPRTGVILGNGMPSMHPSQLSANMSQGGDQ 424
Query: 355 SVSGKSKLPGPEALQMQYSKPFXXXXXXXXXXXXEGVSLNPLSSQGRPVPQLQQH-LGFT 531
++ K+ + PE LQMQ+ K +G S N SSQG P Q+ Q+ +GFT
Sbjct: 425 NMPAKNAINSPETLQMQHLKQMNRSSPQSAGLSNDGGSSNHNSSQGTPSVQMAQNRVGFT 484
Query: 532 KQQSHVLKAQILAFRRLKKGDGTLPRELLQAIAPPPLERQM-LQMSQSGATIMSSGKNAD 708
KQQ HVLKAQILAFRRLKKG+GTLP+ELL+AIAPPPLE Q+ Q +G +
Sbjct: 485 KQQLHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLELQLQQQFLPAGGSNQDRSGGKI 544
Query: 709 TEDHLRRMECSEKDPHAVPLSAGPNNLKREAVIGDEK---TSSRQIVPALLKEPSSSVPS 879
ED + +E +EK+ A+P G N K EAV G EK ++S P K+P++SV
Sbjct: 545 LEDQAKHLESNEKNSQAMPSMNGQNAAKEEAVAGVEKPTVSASNIEGPTAAKDPTTSVAV 604
Query: 880 REXXXXXXXXXLATFSAKTEEGEEHGILEDAVTRSEMHVDKG 1005
R+ ATF K+++ E L+ RS++ DKG
Sbjct: 605 RK-----EEQQTATFPVKSDQEVERS-LQKTPVRSDVTADKG 640
>ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222843090|gb|EEE80637.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 2222
Score = 196 bits (497), Expect = 1e-47
Identities = 139/346 (40%), Positives = 180/346 (52%), Gaps = 12/346 (3%)
Frame = +1
Query: 4 KANETSMGSQSSLITMPKQQVTSPQVANESSPRXXXXXXXXXXXXXXKVIRQTGQPGPFN 183
KANE++ G+QSS + + K QV SP +A+ESSPR K RQT GPF
Sbjct: 308 KANESNPGAQSSHLLVSKPQVASPSIASESSPRANSSSDVSGQSGTAKA-RQTVPSGPFG 366
Query: 184 A-STAALFHNANNNPAQSFSGRSSENQISSRQPTTINNGITPMHPPQSSLNLNQGVDQSV 360
+ S+ + +N +N Q + S ENQ RQ + NG+ N QGVDQ +
Sbjct: 367 STSSGGMVNNPSNLAMQQQAFHSRENQAPPRQTAVLGNGMPA--------NTGQGVDQIL 418
Query: 361 SGKSKLPGPEALQMQYSKPFXXXXXXXXXXXXEGVSLNPLSSQGRPVPQL-QQHLGFTKQ 537
K+ L E Q + + EG S N SSQG P Q+ QQ GFTKQ
Sbjct: 419 PSKNALNSSETSQARQFRQLNRSSPQSAGPSTEGGSGNRFSSQGGPAVQMAQQRTGFTKQ 478
Query: 538 QSHVLKAQILAFRRLKKGDGTLPRELLQAIAPPPLERQMLQMSQSGATIMSSGKNAD--- 708
QSHVLKAQILAFRRLKKG+GTLP+ELL+AIAPPPLE Q+ Q + + G N D
Sbjct: 479 QSHVLKAQILAFRRLKKGEGTLPQELLRAIAPPPLELQLQQQ-----LLPAGGSNQDRPG 533
Query: 709 ---TEDHLRRMECSEKDPHAVPLSAGPNNLKREAVIGDEK----TSSRQIVPALLKEPSS 867
E+ E ++KD A+P G N K E GDEK T + Q PA++KEP
Sbjct: 534 GKIPEEQASHPESNDKDLQAMPSMNGQNVSKEEVFTGDEKAAVSTINMQKAPAVMKEPMP 593
Query: 868 SVPSREXXXXXXXXXLATFSAKTEEGEEHGILEDAVTRSEMHVDKG 1005
V S + ATFS K+++ EHG L+ A S++ D+G
Sbjct: 594 LVASGK-----EEQQTATFSVKSDQESEHG-LQKAPVISDLASDRG 633