BLASTX nr result

ID: Bupleurum21_contig00019404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019404
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloropl...   337   3e-90
ref|XP_002319475.1| predicted protein [Populus trichocarpa] gi|1...   336   4e-90
ref|XP_004139523.1| PREDICTED: psbP domain-containing protein 1,...   328   2e-87
ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|2...   327   2e-87
gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]             325   1e-86

>ref|XP_002512537.1| Thylakoid lumenal 21.5 kDa protein, chloroplast precursor, putative
           [Ricinus communis] gi|223548498|gb|EEF49989.1| Thylakoid
           lumenal 21.5 kDa protein, chloroplast precursor,
           putative [Ricinus communis]
          Length = 265

 Score =  337 bits (863), Expect = 3e-90
 Identities = 166/229 (72%), Positives = 188/229 (82%)
 Frame = +1

Query: 163 SLACSANSPHTQTTKAFAVPRRKMMTLLLSTYVFTQADSIDTARALQSVGLKEYIDTFDG 342
           S  C++ S   Q TKAFAVPRR  M L+ S+ + ++     +A A  SVG +EYIDTFDG
Sbjct: 37  STRCTSISCKNQPTKAFAVPRRSTMALIFSSCILSEVGFHSSALAQSSVGFREYIDTFDG 96

Query: 343 YSFKYPKNWIQVRGANADIFFRDPYILDENXXXXXXXXXXXTYKSVEDLGPPEQAGKNIL 522
           YSFKYPKNWIQVRGA ADIFFRDPY+LDEN            Y SVEDLGPP++AGK +L
Sbjct: 97  YSFKYPKNWIQVRGAGADIFFRDPYVLDENLSVEMSSPSSSKYTSVEDLGPPQEAGKKVL 156

Query: 523 KQYLTEFMSTRLGVKRESSILSTSSRIADDGKMYYQVEVNIKSYANNNELAVMPQDRVTR 702
           KQYLTEFMSTRLGV+RES ILSTSSR+ADDGK+YYQVEVNIKSYANNNE+AVMPQDRV R
Sbjct: 157 KQYLTEFMSTRLGVRRESDILSTSSRVADDGKLYYQVEVNIKSYANNNEMAVMPQDRVVR 216

Query: 703 LEWDRRYLAVLGVENNQLYELRLQVPENVFVEEESDLRQVLNSFRVNKV 849
           LEW+RRYL+VLGVENN+LYELRLQ PENVFVEEE+DLRQV+ SFRVNKV
Sbjct: 217 LEWNRRYLSVLGVENNRLYELRLQTPENVFVEEENDLRQVMESFRVNKV 265


>ref|XP_002319475.1| predicted protein [Populus trichocarpa] gi|118485159|gb|ABK94442.1|
           unknown [Populus trichocarpa]
           gi|222857851|gb|EEE95398.1| predicted protein [Populus
           trichocarpa]
          Length = 265

 Score =  336 bits (862), Expect = 4e-90
 Identities = 164/227 (72%), Positives = 193/227 (85%), Gaps = 1/227 (0%)
 Frame = +1

Query: 172 CSANSPHT-QTTKAFAVPRRKMMTLLLSTYVFTQADSIDTARALQSVGLKEYIDTFDGYS 348
           C ++ PH  Q TKAFAVPRR  M L+LS+Y+F++    + A A +SVG +EYID FDGYS
Sbjct: 37  CFSSIPHNKQLTKAFAVPRRNAMALILSSYIFSEVGFNNIAFAQRSVGFREYIDQFDGYS 96

Query: 349 FKYPKNWIQVRGANADIFFRDPYILDENXXXXXXXXXXXTYKSVEDLGPPEQAGKNILKQ 528
            K+P+NWIQVRGA ADIFFRDP++LDEN            YKSVEDLGPPE+AGK +LKQ
Sbjct: 97  LKHPQNWIQVRGAGADIFFRDPFVLDENLSVELSSPSSSNYKSVEDLGPPEEAGKKVLKQ 156

Query: 529 YLTEFMSTRLGVKRESSILSTSSRIADDGKMYYQVEVNIKSYANNNELAVMPQDRVTRLE 708
           YLTEFMSTRLGV+RES+I+STSSR+ADDGK+YYQVEVNIKSYANNNELAVMPQ+RV RLE
Sbjct: 157 YLTEFMSTRLGVRRESNIISTSSRVADDGKLYYQVEVNIKSYANNNELAVMPQERVVRLE 216

Query: 709 WDRRYLAVLGVENNQLYELRLQVPENVFVEEESDLRQVLNSFRVNKV 849
           W+RRY++VLGVENN+LYELRLQ PENVFVEEE+DLRQV++SFRVNKV
Sbjct: 217 WNRRYMSVLGVENNRLYELRLQTPENVFVEEENDLRQVMDSFRVNKV 263


>ref|XP_004139523.1| PREDICTED: psbP domain-containing protein 1, chloroplastic-like
           [Cucumis sativus] gi|449520599|ref|XP_004167321.1|
           PREDICTED: psbP domain-containing protein 1,
           chloroplastic-like [Cucumis sativus]
          Length = 258

 Score =  328 bits (840), Expect = 2e-87
 Identities = 164/221 (74%), Positives = 187/221 (84%)
 Frame = +1

Query: 193 TQTTKAFAVPRRKMMTLLLSTYVFTQADSIDTARALQSVGLKEYIDTFDGYSFKYPKNWI 372
           +Q+ K  AVPRR  M L+LST +F+     ++A A+ SVGL EYIDTFDGYSFKYPKNWI
Sbjct: 43  SQSIKGVAVPRRSAMALMLSTCIFS-----NSALAVSSVGLLEYIDTFDGYSFKYPKNWI 97

Query: 373 QVRGANADIFFRDPYILDENXXXXXXXXXXXTYKSVEDLGPPEQAGKNILKQYLTEFMST 552
           QVRGA ADIFFRDP++LDEN            Y SV+DLGPPE+AGK +LKQYLTEFMST
Sbjct: 98  QVRGAGADIFFRDPFVLDENLSVEFSSPSSSRYNSVQDLGPPEEAGKKVLKQYLTEFMST 157

Query: 553 RLGVKRESSILSTSSRIADDGKMYYQVEVNIKSYANNNELAVMPQDRVTRLEWDRRYLAV 732
           RLGV+RES+ILSTSSR+ADDG+ YYQVEVNIKSYANNNELAVMPQDRV RLEWDRRYL+V
Sbjct: 158 RLGVRRESNILSTSSRMADDGRTYYQVEVNIKSYANNNELAVMPQDRVVRLEWDRRYLSV 217

Query: 733 LGVENNQLYELRLQVPENVFVEEESDLRQVLNSFRVNKVMA 855
           LGVEN++LYELRLQ PENVFVEEE+DLRQV++SFRVNKV A
Sbjct: 218 LGVENSRLYELRLQTPENVFVEEENDLRQVMDSFRVNKVNA 258


>ref|XP_002330072.1| predicted protein [Populus trichocarpa] gi|222871497|gb|EEF08628.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  327 bits (839), Expect = 2e-87
 Identities = 159/212 (75%), Positives = 184/212 (86%)
 Frame = +1

Query: 214 AVPRRKMMTLLLSTYVFTQADSIDTARALQSVGLKEYIDTFDGYSFKYPKNWIQVRGANA 393
           AVPRR  M L+LS+Y+F++    + A A QSVG +EYID FDGYSFKYP+NWIQVRGA A
Sbjct: 1   AVPRRNAMALILSSYMFSEFGFDNLAFAQQSVGFREYIDQFDGYSFKYPQNWIQVRGAGA 60

Query: 394 DIFFRDPYILDENXXXXXXXXXXXTYKSVEDLGPPEQAGKNILKQYLTEFMSTRLGVKRE 573
           DIFFRDP++LDEN            YKSVEDLGPP++AGK +LKQYLTEFMSTRLGV+RE
Sbjct: 61  DIFFRDPFVLDENLSVELSSPSSSRYKSVEDLGPPQEAGKKVLKQYLTEFMSTRLGVRRE 120

Query: 574 SSILSTSSRIADDGKMYYQVEVNIKSYANNNELAVMPQDRVTRLEWDRRYLAVLGVENNQ 753
           S+ILSTSSR+ADDGK+YYQVEVNIKSYANNNELAVMP++RV RLEWDRRYL+VLGVENNQ
Sbjct: 121 SNILSTSSRVADDGKLYYQVEVNIKSYANNNELAVMPRERVVRLEWDRRYLSVLGVENNQ 180

Query: 754 LYELRLQVPENVFVEEESDLRQVLNSFRVNKV 849
           LYELRLQ PENVFVEEE+DLR+V++SFRVNK+
Sbjct: 181 LYELRLQTPENVFVEEENDLRKVMDSFRVNKI 212


>gb|ADP89574.1| PsbP domain protein 1 [Gossypium hirsutum]
          Length = 257

 Score =  325 bits (833), Expect = 1e-86
 Identities = 161/219 (73%), Positives = 186/219 (84%), Gaps = 1/219 (0%)
 Frame = +1

Query: 196 QTTKAFAVPRRKMMTLLLSTYVFTQADSIDT-ARALQSVGLKEYIDTFDGYSFKYPKNWI 372
           Q+ +A ++PRR  M L+LSTY+F++    D  A A  SVG +EYIDTFDGYS KYP+NWI
Sbjct: 37  QSFQASSIPRRNAMALILSTYIFSEVGLHDNIAFAEPSVGFREYIDTFDGYSLKYPQNWI 96

Query: 373 QVRGANADIFFRDPYILDENXXXXXXXXXXXTYKSVEDLGPPEQAGKNILKQYLTEFMST 552
           QVRGA ADIFFRDPY+LDEN            YK+VEDLGPPE+AGK +LKQYLTEFMST
Sbjct: 97  QVRGAGADIFFRDPYVLDENLSVELSSPSSSRYKTVEDLGPPEEAGKKVLKQYLTEFMST 156

Query: 553 RLGVKRESSILSTSSRIADDGKMYYQVEVNIKSYANNNELAVMPQDRVTRLEWDRRYLAV 732
           RLGV+RES+ILSTSSR+ADDGK+YYQVEVNIKSYAN NELAVMPQDRV RLEW+RRYL+V
Sbjct: 157 RLGVRRESNILSTSSRVADDGKLYYQVEVNIKSYANTNELAVMPQDRVPRLEWNRRYLSV 216

Query: 733 LGVENNQLYELRLQVPENVFVEEESDLRQVLNSFRVNKV 849
           LGVENN+LYELRLQ PE+VFVEEE+DLRQV++SFRVNKV
Sbjct: 217 LGVENNRLYELRLQTPESVFVEEENDLRQVMDSFRVNKV 255


Top