BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019385
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   190   1e-46
ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   187   6e-46
ref|XP_002894392.1| pentatricopeptide repeat-containing protein ...   179   2e-43
ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi...   177   6e-43

>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  190 bits (482), Expect = 1e-46
 Identities = 87/138 (63%), Positives = 110/138 (79%)
 Frame = +2

Query: 2   LPNFQHSKDSYQILIQILGGSKQFPLIWDFLIEIRGEFDDVINSEIFWVIFRAYSRANLP 181
           +P F HSK+SY IL+ ILG SKQF L+WDFLIEIR   D  I+ ++FW++FRAYSRANLP
Sbjct: 101 IPGFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLP 160

Query: 182 ADAITAFNKMVDFGVKPSESDLDQLMFSLCKRKHVRFAQQFFDKVKHEFVPSVKTYSILM 361
           +DAI AF++MV+FG+KP+  DLDQL++ LCKRKH + AQQ FD+VKH+F    KTYSIL+
Sbjct: 161 SDAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILV 220

Query: 362 RGWANIGEPSEARKLFDE 415
           RGW +IGE   A K+FDE
Sbjct: 221 RGWGDIGESVSACKVFDE 238


>ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|222848249|gb|EEE85796.1|
           predicted protein [Populus trichocarpa]
          Length = 523

 Score =  189 bits (480), Expect = 2e-46
 Identities = 85/138 (61%), Positives = 112/138 (81%)
 Frame = +2

Query: 2   LPNFQHSKDSYQILIQILGGSKQFPLIWDFLIEIRGEFDDVINSEIFWVIFRAYSRANLP 181
           +P F+HS++SY IL+ ILG S+QF ++WDFLIE+R   D  IN EI W++FR+YSRANLP
Sbjct: 105 IPGFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLP 164

Query: 182 ADAITAFNKMVDFGVKPSESDLDQLMFSLCKRKHVRFAQQFFDKVKHEFVPSVKTYSILM 361
           +DAI AF++M +FG++PS  DLD+L++ LCK KHV+ AQQFFD+VKH+F    KTYSIL+
Sbjct: 165 SDAIRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILV 224

Query: 362 RGWANIGEPSEARKLFDE 415
           RGW +IGE  EARK+FDE
Sbjct: 225 RGWGDIGEAVEARKVFDE 242


>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  187 bits (476), Expect = 6e-46
 Identities = 90/138 (65%), Positives = 109/138 (78%)
 Frame = +2

Query: 2   LPNFQHSKDSYQILIQILGGSKQFPLIWDFLIEIRGEFDDVINSEIFWVIFRAYSRANLP 181
           LP F+HSK+SY IL+ ILG SKQFPLIWDFL ++R      I  EIFW+IFRAY RANLP
Sbjct: 107 LPGFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLP 166

Query: 182 ADAITAFNKMVDFGVKPSESDLDQLMFSLCKRKHVRFAQQFFDKVKHEFVPSVKTYSILM 361
            DAI AF++M DFGVK    D+DQL++ LCKRKHV+ AQ+FFDKV  E +P+ KTYSILM
Sbjct: 167 GDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILM 226

Query: 362 RGWANIGEPSEARKLFDE 415
           RGW ++G+ SEARKLF+E
Sbjct: 227 RGWGDVGDSSEARKLFEE 244


>ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297340234|gb|EFH70651.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 525

 Score =  179 bits (454), Expect = 2e-43
 Identities = 87/139 (62%), Positives = 108/139 (77%), Gaps = 1/139 (0%)
 Frame = +2

Query: 2   LPNFQHSKDSYQILIQILGGSKQFPLIWDFLIEIRGEFDDVINSEIFWVIFRAYSRANLP 181
           +P+F+HS +SY IL++ILG SKQF L+WDFLIE R      I S++FW++FRAYSRANLP
Sbjct: 95  IPDFEHSLESYHILVEILGCSKQFALLWDFLIEAREYNYFEITSKVFWIVFRAYSRANLP 154

Query: 182 ADAITAFNKMVDFGVKPSESDLDQLMFSLCKRKHVRFAQQFFDKVK-HEFVPSVKTYSIL 358
           ++A  AFN+MV+FG+KP   DLDQL+ SLC RKHV  AQ+FFDK K    VPS KTYSIL
Sbjct: 155 SEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSIL 214

Query: 359 MRGWANIGEPSEARKLFDE 415
           +RGWA I + S ARK+FDE
Sbjct: 215 VRGWARIRDASGARKVFDE 233


>ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  177 bits (450), Expect = 6e-43
 Identities = 83/138 (60%), Positives = 105/138 (76%)
 Frame = +2

Query: 2   LPNFQHSKDSYQILIQILGGSKQFPLIWDFLIEIRGEFDDVINSEIFWVIFRAYSRANLP 181
           +P F+ S DSY I++ ILGGS QF ++WDFLIEIR     VI  E+FW +F AYSRA+LP
Sbjct: 108 IPGFEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLP 167

Query: 182 ADAITAFNKMVDFGVKPSESDLDQLMFSLCKRKHVRFAQQFFDKVKHEFVPSVKTYSILM 361
            DAI AFN+M +FG++    DLD+L+++LCKRKHV  AQQFFDKVK  F PSVKTYSIL 
Sbjct: 168 QDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILT 227

Query: 362 RGWANIGEPSEARKLFDE 415
           RGW  +G+ + A+K+FDE
Sbjct: 228 RGWGVVGDSNNAQKVFDE 245