BLASTX nr result

ID: Bupleurum21_contig00019384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019384
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64...   127   9e-28
ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane prot...   125   4e-27
ref|XP_002297922.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
gb|AFK48557.1| unknown [Lotus japonicus]                              114   6e-24

>ref|XP_002270047.2| PREDICTED: LOW QUALITY PROTEIN: TVP38/TMEM64 family membrane
           protein slr0305 [Vitis vinifera]
          Length = 324

 Score =  127 bits (319), Expect = 9e-28
 Identities = 58/89 (65%), Positives = 73/89 (82%)
 Frame = +3

Query: 210 HNVRQAKEDSEYVRLVISNEPKTLDADILQSQSQPRIKSFKWWIKAVILCLITIIALLVL 389
           HNVR   E+SEYVRLVISNE +  +ADILQ Q++ RIKSF WW+KA+I C++ +I LL+ 
Sbjct: 17  HNVR---EESEYVRLVISNEARLSEADILQPQAETRIKSFIWWLKALIFCVVNVIFLLIF 73

Query: 390 LKWGVPFLFEKVLVPTMQWESTAFGRPVL 476
           LKWG PF+FEK+L+P M WE+TAFGRPVL
Sbjct: 74  LKWGAPFMFEKILLPIMHWEATAFGRPVL 102


>ref|XP_002270145.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305 [Vitis
           vinifera] gi|297739420|emb|CBI29602.3| unnamed protein
           product [Vitis vinifera]
          Length = 320

 Score =  125 bits (314), Expect = 4e-27
 Identities = 59/89 (66%), Positives = 72/89 (80%)
 Frame = +3

Query: 210 HNVRQAKEDSEYVRLVISNEPKTLDADILQSQSQPRIKSFKWWIKAVILCLITIIALLVL 389
           H+VR   E+SEYVRLVISNE +  +ADILQ Q++ RIKSF WW KA+I C++ II LLV 
Sbjct: 17  HDVR---EESEYVRLVISNEARLSEADILQPQAETRIKSFIWWFKALIFCVVNIIFLLVF 73

Query: 390 LKWGVPFLFEKVLVPTMQWESTAFGRPVL 476
           LKWG PF+FEK+L+P M WE+TAFGRPVL
Sbjct: 74  LKWGAPFMFEKILLPIMHWEATAFGRPVL 102


>ref|XP_002297922.1| predicted protein [Populus trichocarpa] gi|222845180|gb|EEE82727.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/83 (68%), Positives = 70/83 (84%)
 Frame = +3

Query: 228 KEDSEYVRLVISNEPKTLDADILQSQSQPRIKSFKWWIKAVILCLITIIALLVLLKWGVP 407
           +EDSEYVRLVIS+EP+  + DI Q QS+ R+K+F WWIKA+I CL+  I LLV +KWGVP
Sbjct: 20  REDSEYVRLVISDEPRAPEFDISQLQSRARMKAFIWWIKALIWCLVITILLLVFVKWGVP 79

Query: 408 FLFEKVLVPTMQWESTAFGRPVL 476
           FLFEKVL+P M+WE+TAFGRPVL
Sbjct: 80  FLFEKVLLPMMEWEATAFGRPVL 102


>ref|XP_002332702.1| predicted protein [Populus trichocarpa] gi|222832956|gb|EEE71433.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  118 bits (296), Expect = 4e-25
 Identities = 60/90 (66%), Positives = 71/90 (78%)
 Frame = +3

Query: 207 EHNVRQAKEDSEYVRLVISNEPKTLDADILQSQSQPRIKSFKWWIKAVILCLITIIALLV 386
           EHNVR   EDSEYVRLVIS+EP+  D DI Q QS+ RIK+F  WIKA+I CL+    +LV
Sbjct: 16  EHNVR---EDSEYVRLVISDEPRVGDFDISQVQSRARIKAFIRWIKALIWCLVIATLVLV 72

Query: 387 LLKWGVPFLFEKVLVPTMQWESTAFGRPVL 476
            LKWGV FLF+KVL+P M+WE+TAFGRPVL
Sbjct: 73  FLKWGVSFLFDKVLLPMMEWEATAFGRPVL 102


>gb|AFK48557.1| unknown [Lotus japonicus]
          Length = 314

 Score =  114 bits (286), Expect = 6e-24
 Identities = 47/85 (55%), Positives = 69/85 (81%)
 Frame = +3

Query: 222 QAKEDSEYVRLVISNEPKTLDADILQSQSQPRIKSFKWWIKAVILCLITIIALLVLLKWG 401
           + +  SEYVRLVIS+EP+ ++ +++Q + + RI SF+WW+K ++ CL +++  LVLLKWG
Sbjct: 21  RGRGSSEYVRLVISDEPRAVETEMIQPREESRINSFRWWMKVLLWCLASVVLGLVLLKWG 80

Query: 402 VPFLFEKVLVPTMQWESTAFGRPVL 476
           VPF+FEK+L PTM+WE+TAFGRP L
Sbjct: 81  VPFVFEKILYPTMEWEATAFGRPAL 105


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