BLASTX nr result

ID: Bupleurum21_contig00019356 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019356
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62511.1| hypothetical protein VITISV_039514 [Vitis vinifera]    75   4e-12
emb|CBI14995.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002318083.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002322177.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002511363.1| hypothetical protein RCOM_1509910 [Ricinus c...    62   6e-08

>emb|CAN62511.1| hypothetical protein VITISV_039514 [Vitis vinifera]
          Length = 1038

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 49/105 (46%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
 Frame = +2

Query: 2    NAVHHDGRREKKP-ATAKERPQPYHKHGPGSLDELPPPEIG-NTRFEQRSSSGFRKHGNQ 175
            NA H + +RE+K  A+ K RP   H    G ++ + P   G + R EQR S+GFRK+GN 
Sbjct: 883  NAGHQETKREEKNIASLKGRP---HSPIQGPVNSVEPLPAGTDIRNEQRLSTGFRKNGNH 939

Query: 176  SGQSGRV-QEPREDWSSLEQDARHRNVPGNRERQPRNSHFEYQPV 307
            S +  R   E   DWSS  QD +  N P NRERQ  NSH EYQPV
Sbjct: 940  SNRFSRGGHESHGDWSSGGQDNKQHNQPPNRERQRHNSHNEYQPV 984


>emb|CBI14995.3| unnamed protein product [Vitis vinifera]
          Length = 1437

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 46/101 (45%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
 Frame = +2

Query: 11   HHDGRREKKPATAKERPQPYHKHGPGSLDELPPPEIG-NTRFEQRSSSGFRKHGNQSGQS 187
            H+  + EK  A+ K RP   H    G ++ + P   G + R EQR S+GFRK+GN S + 
Sbjct: 1276 HNSSQNEKNIASLKGRP---HSPIQGPVNSVEPLPAGTDIRNEQRLSTGFRKNGNHSNRF 1332

Query: 188  GRV-QEPREDWSSLEQDARHRNVPGNRERQPRNSHFEYQPV 307
             R   E   DWSS  QD +  N P NRERQ  NSH EYQPV
Sbjct: 1333 SRGGHESHGDWSSGGQDNKQHNQPPNRERQRHNSHNEYQPV 1373


>ref|XP_002318083.1| predicted protein [Populus trichocarpa] gi|222858756|gb|EEE96303.1|
            predicted protein [Populus trichocarpa]
          Length = 1519

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
 Frame = +2

Query: 29   EKKPATAKE-----RPQPYHKHGPGSLDELPPPEIGNTRFEQRSSSGFRKHGNQSGQSGR 193
            E+ P TA +     R  P HK    S    P P   + + EQR SSGF+K+GNQ+ + G 
Sbjct: 1366 EEVPRTAHQEGKNGRKIPSHKGRRPSSPVEPSPLNMDFQQEQRVSSGFQKNGNQNSRFGG 1425

Query: 194  VQEPREDWSSLEQDARHRNVPGNRERQPRNSHFEYQPVG 310
              +   +WS   +D + +NVP NRERQ +N+H+E QPVG
Sbjct: 1426 EHDSHGEWSGSGKDNKQQNVPANRERQIQNTHYECQPVG 1464


>ref|XP_002322177.1| predicted protein [Populus trichocarpa] gi|222869173|gb|EEF06304.1|
            predicted protein [Populus trichocarpa]
          Length = 1517

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
 Frame = +2

Query: 29   EKKPATA-----KERPQPYHKHGPGSLDELPPPEIGNTRFEQRSSSGFRKHGNQSGQSGR 193
            E+ P+T      KER    HK  P     L      N  F+QR SSGFRK+GNQ+ + GR
Sbjct: 1374 EEDPSTGHQEVKKERKIASHKGHPAEPSPL------NMDFQQRVSSGFRKNGNQNSRFGR 1427

Query: 194  VQEPR-EDWSSLEQDARHRNVPGNRERQPRNSHFEYQPVG 310
              + R  +WS   +D  H     NRERQ +NSH+EYQPVG
Sbjct: 1428 EHDSRGGEWSGPGKDNEHH----NRERQRQNSHYEYQPVG 1463


>ref|XP_002511363.1| hypothetical protein RCOM_1509910 [Ricinus communis]
            gi|223550478|gb|EEF51965.1| hypothetical protein
            RCOM_1509910 [Ricinus communis]
          Length = 1411

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
 Frame = +2

Query: 11   HHD------GRREKKPATAKERPQPYHKHG-----PGSLDELPPPEIGNTRFEQRSSSGF 157
            HHD      G  E+ PA   + P+   K G     PGS  E       +   + R SSGF
Sbjct: 1248 HHDQSPFESGNLEEGPAVGHQEPKRERKIGGHRGHPGSPIESSSHSNMDGGQDHRMSSGF 1307

Query: 158  RKHGNQSGQSGRVQEPREDWSSLEQDARHR-NVPGNRERQPRNSHFEYQPVG 310
            RK GN + + GR  +   DW+   +D + + N    RE Q  NSH+EYQPVG
Sbjct: 1308 RKSGNLNNRFGREHDSWGDWNGSGKDNKQQHNASAIRESQRHNSHYEYQPVG 1359


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