BLASTX nr result

ID: Bupleurum21_contig00019345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019345
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts ...   196   1e-48
ref|XP_004140737.1| PREDICTED: elongation factor Ts, mitochondri...   191   7e-47
ref|XP_002524565.1| elongation factor ts, putative [Ricinus comm...   187   8e-46
ref|XP_002320543.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
gb|AAC35534.1| similar to elongation factor EF-Ts [Arabidopsis t...   182   2e-44

>ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts precursor [Solanum
           lycopersicum] gi|5669636|gb|AAD46403.1|AF096247_1
           ethylene-responsive elongation factor EF-Ts precursor
           [Solanum lycopersicum]
          Length = 391

 Score =  196 bits (499), Expect = 1e-48
 Identities = 99/114 (86%), Positives = 112/114 (98%)
 Frame = -1

Query: 452 LQRVGSELAMHVVAAKPLFLTKELVSSDAVNNEREILKSQAEASGKPQMAIEKMVEGRLR 273
           LQRVGSELAMHVVAAKPLFLTKE VSSDA++NEREILKSQAE+SGKPQ+A+EKMVEGRLR
Sbjct: 266 LQRVGSELAMHVVAAKPLFLTKEDVSSDALSNEREILKSQAESSGKPQIAVEKMVEGRLR 325

Query: 272 KYFEEVVLMEQKFIVNDSVNVKTLLSNLSKEIGSPVKVGNFLRIEVGEGLQSVE 111
           KYFEEVVLMEQKFIVND++NVKTLLSNLSK++GSPVK+G+FLR+EVGEGLQ +E
Sbjct: 326 KYFEEVVLMEQKFIVNDTMNVKTLLSNLSKDVGSPVKIGSFLRMEVGEGLQRLE 379


>ref|XP_004140737.1| PREDICTED: elongation factor Ts, mitochondrial-like [Cucumis
           sativus]
          Length = 401

 Score =  191 bits (484), Expect = 7e-47
 Identities = 95/114 (83%), Positives = 106/114 (92%)
 Frame = -1

Query: 452 LQRVGSELAMHVVAAKPLFLTKELVSSDAVNNEREILKSQAEASGKPQMAIEKMVEGRLR 273
           LQRVGSELAMHVVAAKPLFLTKELV+SDA+ NEREILKSQAE +GK QMAIEKMVEGRLR
Sbjct: 276 LQRVGSELAMHVVAAKPLFLTKELVASDALENEREILKSQAETTGKSQMAIEKMVEGRLR 335

Query: 272 KYFEEVVLMEQKFIVNDSVNVKTLLSNLSKEIGSPVKVGNFLRIEVGEGLQSVE 111
           KY EEVVLMEQKFI+NDS+NVKT+L NLSKE+GSPVK+GNFLR+ VGEG+  +E
Sbjct: 336 KYMEEVVLMEQKFIINDSINVKTMLDNLSKEVGSPVKIGNFLRVGVGEGIDRLE 389


>ref|XP_002524565.1| elongation factor ts, putative [Ricinus communis]
           gi|313118247|sp|B9SEZ6.1|EFTS_RICCO RecName:
           Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
           Short=EF-TsMt; Flags: Precursor
           gi|223536118|gb|EEF37773.1| elongation factor ts,
           putative [Ricinus communis]
          Length = 379

 Score =  187 bits (475), Expect = 8e-46
 Identities = 93/114 (81%), Positives = 108/114 (94%)
 Frame = -1

Query: 452 LQRVGSELAMHVVAAKPLFLTKELVSSDAVNNEREILKSQAEASGKPQMAIEKMVEGRLR 273
           L  VGSELAMHVVAAKPLFLTKELVSSDA+ +EREILKSQAE++GK QMAIEKMVEGRLR
Sbjct: 254 LHHVGSELAMHVVAAKPLFLTKELVSSDALESEREILKSQAESTGKSQMAIEKMVEGRLR 313

Query: 272 KYFEEVVLMEQKFIVNDSVNVKTLLSNLSKEIGSPVKVGNFLRIEVGEGLQSVE 111
           KY+EEVVLMEQKFI+ND+VNVKT+L+NLSKE+GSPVK+G+F R+EVGEG+Q +E
Sbjct: 314 KYYEEVVLMEQKFIINDAVNVKTVLNNLSKEVGSPVKIGSFFRMEVGEGIQRLE 367


>ref|XP_002320543.1| predicted protein [Populus trichocarpa] gi|222861316|gb|EEE98858.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  186 bits (472), Expect = 2e-45
 Identities = 93/114 (81%), Positives = 108/114 (94%)
 Frame = -1

Query: 452 LQRVGSELAMHVVAAKPLFLTKELVSSDAVNNEREILKSQAEASGKPQMAIEKMVEGRLR 273
           LQRVGSELA+H+VAAKPLFLTKE VSSDA+ +EREILKSQAE++GK QMAIEKMVEGRLR
Sbjct: 198 LQRVGSELAVHLVAAKPLFLTKEGVSSDALESEREILKSQAESTGKSQMAIEKMVEGRLR 257

Query: 272 KYFEEVVLMEQKFIVNDSVNVKTLLSNLSKEIGSPVKVGNFLRIEVGEGLQSVE 111
           KY+EEVVLMEQKF++ND++NVKTLLSNLSKE+GSPVK+GNF R+EVGEG+Q  E
Sbjct: 258 KYYEEVVLMEQKFVMNDTMNVKTLLSNLSKEVGSPVKIGNFFRMEVGEGIQREE 311


>gb|AAC35534.1| similar to elongation factor EF-Ts [Arabidopsis thaliana]
          Length = 398

 Score =  182 bits (463), Expect = 2e-44
 Identities = 90/114 (78%), Positives = 108/114 (94%)
 Frame = -1

Query: 452 LQRVGSELAMHVVAAKPLFLTKELVSSDAVNNEREILKSQAEASGKPQMAIEKMVEGRLR 273
           +QRVGSELAMHVVAAKPLFL+K+LVSS+A+ NEREILKSQAE++GK QMAIEK+VEGRLR
Sbjct: 275 IQRVGSELAMHVVAAKPLFLSKDLVSSEAMANEREILKSQAESTGKNQMAIEKIVEGRLR 334

Query: 272 KYFEEVVLMEQKFIVNDSVNVKTLLSNLSKEIGSPVKVGNFLRIEVGEGLQSVE 111
           KYFEEV LMEQKFIVND++N+KTL+ NLSKE+GSPVKV +FLR+EVGEG++ +E
Sbjct: 335 KYFEEVALMEQKFIVNDAINIKTLVDNLSKEVGSPVKVTDFLRVEVGEGIERLE 388


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