BLASTX nr result

ID: Bupleurum21_contig00019330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019330
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21296.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002274922.1| PREDICTED: GEM-like protein 5-like [Vitis vi...    62   6e-08
ref|XP_002303760.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002303759.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002336490.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>emb|CBI21296.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/42 (69%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
 Frame = -3

Query: 281 YIQ-MTVDGQDFWFMGFVNFEKASHNLLESISSFAATGIPVQ 159
           YIQ +TVDG DFWFMGFVN++KAS +L ES+++F ATGI VQ
Sbjct: 194 YIQTVTVDGHDFWFMGFVNYDKASQHLTESMTNFIATGIAVQ 235


>ref|XP_002274922.1| PREDICTED: GEM-like protein 5-like [Vitis vinifera]
          Length = 331

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/42 (69%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
 Frame = -3

Query: 281 YIQ-MTVDGQDFWFMGFVNFEKASHNLLESISSFAATGIPVQ 159
           YIQ +TVDG DFWFMGFVN++KAS +L ES+++F ATGI VQ
Sbjct: 286 YIQTVTVDGHDFWFMGFVNYDKASQHLTESMTNFIATGIAVQ 327


>ref|XP_002303760.1| predicted protein [Populus trichocarpa] gi|222841192|gb|EEE78739.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
 Frame = -3

Query: 281 YIQM-TVDGQDFWFMGFVNFEKASHNLLESISSFAATGIPVQ 159
           YIQ+ + DG DFWFMGFVNFEKA  NL ES+SSF   GI +Q
Sbjct: 231 YIQIVSTDGHDFWFMGFVNFEKALQNLSESVSSFKEAGIAIQ 272


>ref|XP_002303759.1| predicted protein [Populus trichocarpa] gi|222841191|gb|EEE78738.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
 Frame = -3

Query: 281 YIQM-TVDGQDFWFMGFVNFEKASHNLLESISSFAATGIPVQ 159
           YIQ+ + DG DFWFMGFVNFEKA  NL ES+SSF   GI +Q
Sbjct: 231 YIQIVSTDGHDFWFMGFVNFEKALQNLSESVSSFKEAGIAIQ 272


>ref|XP_002336490.1| predicted protein [Populus trichocarpa] gi|222835548|gb|EEE73983.1|
           predicted protein [Populus trichocarpa]
          Length = 68

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
 Frame = -3

Query: 281 YIQM-TVDGQDFWFMGFVNFEKASHNLLESISSFAATGIPVQ 159
           YIQ+ + DG DFWFMGFVNFEKA  NL ES+SSF   GI +Q
Sbjct: 23  YIQIVSTDGHDFWFMGFVNFEKALQNLSESVSSFKEAGIAIQ 64


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