BLASTX nr result

ID: Bupleurum21_contig00019311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019311
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    52   1e-09
emb|CBI38283.3| unnamed protein product [Vitis vinifera]               52   1e-09
emb|CAN59993.1| hypothetical protein VITISV_009779 [Vitis vinifera]    52   2e-09
ref|XP_003554101.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    47   1e-06
ref|XP_004170429.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    57   2e-06

>ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Vitis
           vinifera]
          Length = 1056

 Score = 51.6 bits (122), Expect(2) = 1e-09
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = -2

Query: 122 LKRPSPIDNSDLVKHSDSEDSTIKDELREALVEGTDYILL 3
           +KRPS IDNSDL+    SEDST+  EL + LVEG DYILL
Sbjct: 81  VKRPSVIDNSDLIYDMTSEDSTMGIELHDTLVEGRDYILL 120



 Score = 35.4 bits (80), Expect(2) = 1e-09
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 273 ICATEPLTKEGDVFYLLNYRWWRRLCE 193
           + + E  TKEGD FYL+  RWW++  E
Sbjct: 28  VISAEAHTKEGDTFYLITQRWWQQWLE 54


>emb|CBI38283.3| unnamed protein product [Vitis vinifera]
          Length = 955

 Score = 51.6 bits (122), Expect(2) = 1e-09
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = -2

Query: 122 LKRPSPIDNSDLVKHSDSEDSTIKDELREALVEGTDYILL 3
           +KRPS IDNSDL+    SEDST+  EL + LVEG DYILL
Sbjct: 81  VKRPSVIDNSDLIYDMTSEDSTMGIELHDTLVEGRDYILL 120



 Score = 35.4 bits (80), Expect(2) = 1e-09
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 273 ICATEPLTKEGDVFYLLNYRWWRRLCE 193
           + + E  TKEGD FYL+  RWW++  E
Sbjct: 28  VISAEAHTKEGDTFYLITQRWWQQWLE 54


>emb|CAN59993.1| hypothetical protein VITISV_009779 [Vitis vinifera]
          Length = 518

 Score = 51.6 bits (122), Expect(2) = 2e-09
 Identities = 26/40 (65%), Positives = 30/40 (75%)
 Frame = -2

Query: 122 LKRPSPIDNSDLVKHSDSEDSTIKDELREALVEGTDYILL 3
           +KRPS IDNSDL+    SEDST+  EL + LVEG DYILL
Sbjct: 81  VKRPSVIDNSDLIYDMTSEDSTMGIELHDTLVEGRDYILL 120



 Score = 35.4 bits (80), Expect(2) = 2e-09
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 273 ICATEPLTKEGDVFYLLNYRWWRRLCE 193
           + + E  TKEGD FYL+  RWW++  E
Sbjct: 28  VISAEAHTKEGDTFYLITQRWWQQWLE 54


>ref|XP_003554101.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Glycine
           max]
          Length = 938

 Score = 47.0 bits (110), Expect(2) = 1e-06
 Identities = 21/41 (51%), Positives = 31/41 (75%)
 Frame = -2

Query: 125 ILKRPSPIDNSDLVKHSDSEDSTIKDELREALVEGTDYILL 3
           +LKRP+ IDNSDL+  + SED+ +  E+ + L+EG DY+LL
Sbjct: 80  VLKRPAGIDNSDLIDDAVSEDTGMGIEIHDTLLEGRDYVLL 120



 Score = 30.4 bits (67), Expect(2) = 1e-06
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 252 TKEGDVFYLLNYRWWRRLCE 193
           +KEGD F+L+  RWW+   E
Sbjct: 34  SKEGDTFFLITQRWWQHWIE 53


>ref|XP_004170429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Cucumis
           sativus]
          Length = 496

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
 Frame = -2

Query: 308 TPEQQMITITDLSVPPNLLPRKAMCSIF*II-----DGGVDYAKQNPSVAANDGXXXXXX 144
           TPE++ I I D+++      ++    IF +I        ++Y  Q+  +  NDG      
Sbjct: 16  TPEEERIMIRDIALAAEANTKEG--DIFYLITQRWWQHWIEYVNQDQPINTNDGSSFAEI 73

Query: 143 XXXXXS-ILKRPSPIDNSDLVKHSDSEDSTIKDELREALVEGTDYILL 3
                S +LKRP+ IDNSDL+  + SEDS+   E+ + L+EG DY+LL
Sbjct: 74  YDSFGSSMLKRPASIDNSDLIYDAASEDSSAGIEIHDTLLEGRDYVLL 121


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