BLASTX nr result
ID: Bupleurum21_contig00019311
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00019311 (372 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 52 1e-09 emb|CBI38283.3| unnamed protein product [Vitis vinifera] 52 1e-09 emb|CAN59993.1| hypothetical protein VITISV_009779 [Vitis vinifera] 52 2e-09 ref|XP_003554101.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 47 1e-06 ref|XP_004170429.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 57 2e-06 >ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Vitis vinifera] Length = 1056 Score = 51.6 bits (122), Expect(2) = 1e-09 Identities = 26/40 (65%), Positives = 30/40 (75%) Frame = -2 Query: 122 LKRPSPIDNSDLVKHSDSEDSTIKDELREALVEGTDYILL 3 +KRPS IDNSDL+ SEDST+ EL + LVEG DYILL Sbjct: 81 VKRPSVIDNSDLIYDMTSEDSTMGIELHDTLVEGRDYILL 120 Score = 35.4 bits (80), Expect(2) = 1e-09 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -1 Query: 273 ICATEPLTKEGDVFYLLNYRWWRRLCE 193 + + E TKEGD FYL+ RWW++ E Sbjct: 28 VISAEAHTKEGDTFYLITQRWWQQWLE 54 >emb|CBI38283.3| unnamed protein product [Vitis vinifera] Length = 955 Score = 51.6 bits (122), Expect(2) = 1e-09 Identities = 26/40 (65%), Positives = 30/40 (75%) Frame = -2 Query: 122 LKRPSPIDNSDLVKHSDSEDSTIKDELREALVEGTDYILL 3 +KRPS IDNSDL+ SEDST+ EL + LVEG DYILL Sbjct: 81 VKRPSVIDNSDLIYDMTSEDSTMGIELHDTLVEGRDYILL 120 Score = 35.4 bits (80), Expect(2) = 1e-09 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -1 Query: 273 ICATEPLTKEGDVFYLLNYRWWRRLCE 193 + + E TKEGD FYL+ RWW++ E Sbjct: 28 VISAEAHTKEGDTFYLITQRWWQQWLE 54 >emb|CAN59993.1| hypothetical protein VITISV_009779 [Vitis vinifera] Length = 518 Score = 51.6 bits (122), Expect(2) = 2e-09 Identities = 26/40 (65%), Positives = 30/40 (75%) Frame = -2 Query: 122 LKRPSPIDNSDLVKHSDSEDSTIKDELREALVEGTDYILL 3 +KRPS IDNSDL+ SEDST+ EL + LVEG DYILL Sbjct: 81 VKRPSVIDNSDLIYDMTSEDSTMGIELHDTLVEGRDYILL 120 Score = 35.4 bits (80), Expect(2) = 2e-09 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -1 Query: 273 ICATEPLTKEGDVFYLLNYRWWRRLCE 193 + + E TKEGD FYL+ RWW++ E Sbjct: 28 VISAEAHTKEGDTFYLITQRWWQQWLE 54 >ref|XP_003554101.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Glycine max] Length = 938 Score = 47.0 bits (110), Expect(2) = 1e-06 Identities = 21/41 (51%), Positives = 31/41 (75%) Frame = -2 Query: 125 ILKRPSPIDNSDLVKHSDSEDSTIKDELREALVEGTDYILL 3 +LKRP+ IDNSDL+ + SED+ + E+ + L+EG DY+LL Sbjct: 80 VLKRPAGIDNSDLIDDAVSEDTGMGIEIHDTLLEGRDYVLL 120 Score = 30.4 bits (67), Expect(2) = 1e-06 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 Query: 252 TKEGDVFYLLNYRWWRRLCE 193 +KEGD F+L+ RWW+ E Sbjct: 34 SKEGDTFFLITQRWWQHWIE 53 >ref|XP_004170429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Cucumis sativus] Length = 496 Score = 56.6 bits (135), Expect = 2e-06 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 6/108 (5%) Frame = -2 Query: 308 TPEQQMITITDLSVPPNLLPRKAMCSIF*II-----DGGVDYAKQNPSVAANDGXXXXXX 144 TPE++ I I D+++ ++ IF +I ++Y Q+ + NDG Sbjct: 16 TPEEERIMIRDIALAAEANTKEG--DIFYLITQRWWQHWIEYVNQDQPINTNDGSSFAEI 73 Query: 143 XXXXXS-ILKRPSPIDNSDLVKHSDSEDSTIKDELREALVEGTDYILL 3 S +LKRP+ IDNSDL+ + SEDS+ E+ + L+EG DY+LL Sbjct: 74 YDSFGSSMLKRPASIDNSDLIYDAASEDSSAGIEIHDTLLEGRDYVLL 121