BLASTX nr result

ID: Bupleurum21_contig00019308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019308
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18973.3| unnamed protein product [Vitis vinifera]              253   1e-87
ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248...   251   3e-87
ref|XP_002329176.1| predicted protein [Populus trichocarpa] gi|2...   250   7e-81
ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793...   223   2e-77
ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thalia...   236   3e-77

>emb|CBI18973.3| unnamed protein product [Vitis vinifera]
          Length = 734

 Score =  253 bits (646), Expect(2) = 1e-87
 Identities = 117/196 (59%), Positives = 149/196 (76%)
 Frame = +3

Query: 228  DWRYSGIHALTISGTGYFYTGNGDRSIKVWSLQNYNLSCTLTGHKSVVSTLAVCNGVLYS 407
            DWRYSGIHAL ISGTGY YTG+GD+SIK WSLQ+  LSCT+ GHKSVVS LAV +GVLYS
Sbjct: 539  DWRYSGIHALAISGTGYLYTGSGDKSIKAWSLQDCTLSCTMNGHKSVVSALAVSDGVLYS 598

Query: 408  GSWDGTVRLWSLSDHSPLTILGENXXXXXXXXXXXXADQNMLVVADESGQIKIWKDNHLI 587
            GSWDGT+RLWSL+DHSPLT+LGE+            AD +ML+ A E G +KIW+++  +
Sbjct: 599  GSWDGTIRLWSLNDHSPLTVLGEDTPGNVISVLSLKADHHMLLAAHEDGCLKIWRNDVFM 658

Query: 588  NSTAAQEGAIFSVSVKAMLIFTGGWSKTVMIQQLQGDNTSMDVIPVGSIACDSVITALTY 767
             S  A +GA+F+V++    +FTGGW K+V +Q++ GD+  ++ +PVGSIA DS +TAL Y
Sbjct: 659  KSIQAHDGAVFAVAMGGKWLFTGGWDKSVNVQEISGDDLQIEALPVGSIASDSAVTALLY 718

Query: 768  WKGKLIVGQADRTIKV 815
            W+GKL VG ADR IKV
Sbjct: 719  WQGKLFVGCADRIIKV 734



 Score = 98.2 bits (243), Expect(2) = 1e-87
 Identities = 42/61 (68%), Positives = 50/61 (81%)
 Frame = +1

Query: 1   WSLEDFTHIHSFKGHEHKVMAVAFVDEGQPLCISGDNGGGICIWGISTPFSEEPIKKLGE 180
           WSL+DFT +H F+GHEH+VMAV FVDE QPLCISGD GGGI +WGIS P  +EP+KK  E
Sbjct: 477 WSLQDFTLVHQFRGHEHRVMAVVFVDEEQPLCISGDIGGGIFVWGISIPLGQEPLKKWFE 536

Query: 181 E 183
           +
Sbjct: 537 Q 537


>ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
          Length = 1817

 Score =  251 bits (642), Expect(2) = 3e-87
 Identities = 116/195 (59%), Positives = 148/195 (75%)
 Frame = +3

Query: 228  DWRYSGIHALTISGTGYFYTGNGDRSIKVWSLQNYNLSCTLTGHKSVVSTLAVCNGVLYS 407
            DWRYSGIHAL ISGTGY YTG+GD+SIK WSLQ+  LSCT+ GHKSVVS LAV +GVLYS
Sbjct: 623  DWRYSGIHALAISGTGYLYTGSGDKSIKAWSLQDCTLSCTMNGHKSVVSALAVSDGVLYS 682

Query: 408  GSWDGTVRLWSLSDHSPLTILGENXXXXXXXXXXXXADQNMLVVADESGQIKIWKDNHLI 587
            GSWDGT+RLWSL+DHSPLT+LGE+            AD +ML+ A E G +KIW+++  +
Sbjct: 683  GSWDGTIRLWSLNDHSPLTVLGEDTPGNVISVLSLKADHHMLLAAHEDGCLKIWRNDVFM 742

Query: 588  NSTAAQEGAIFSVSVKAMLIFTGGWSKTVMIQQLQGDNTSMDVIPVGSIACDSVITALTY 767
             S  A +GA+F+V++    +FTGGW K+V +Q++ GD+  ++ +PVGSIA DS +TAL Y
Sbjct: 743  KSIQAHDGAVFAVAMGGKWLFTGGWDKSVNVQEISGDDLQIEALPVGSIASDSAVTALLY 802

Query: 768  WKGKLIVGQADRTIK 812
            W+GKL VG ADR IK
Sbjct: 803  WQGKLFVGCADRIIK 817



 Score = 98.2 bits (243), Expect(2) = 3e-87
 Identities = 42/61 (68%), Positives = 50/61 (81%)
 Frame = +1

Query: 1   WSLEDFTHIHSFKGHEHKVMAVAFVDEGQPLCISGDNGGGICIWGISTPFSEEPIKKLGE 180
           WSL+DFT +H F+GHEH+VMAV FVDE QPLCISGD GGGI +WGIS P  +EP+KK  E
Sbjct: 561 WSLQDFTLVHQFRGHEHRVMAVVFVDEEQPLCISGDIGGGIFVWGISIPLGQEPLKKWFE 620

Query: 181 E 183
           +
Sbjct: 621 Q 621


>ref|XP_002329176.1| predicted protein [Populus trichocarpa] gi|222870957|gb|EEF08088.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  250 bits (638), Expect(2) = 7e-81
 Identities = 116/201 (57%), Positives = 145/201 (72%)
 Frame = +3

Query: 228 DWRYSGIHALTISGTGYFYTGNGDRSIKVWSLQNYNLSCTLTGHKSVVSTLAVCNGVLYS 407
           DWRYSGIHALT +G GY YTG+GDRS+K WSLQ+  LSC + GHKSVVSTLA C+G+LYS
Sbjct: 55  DWRYSGIHALTTAGNGYLYTGSGDRSVKAWSLQDGTLSCIMDGHKSVVSTLAACDGILYS 114

Query: 408 GSWDGTVRLWSLSDHSPLTILGENXXXXXXXXXXXXADQNMLVVADESGQIKIWKDNHLI 587
           GSWDGT+RLWSL+DHSPLT+LG +            A+QN+LV A E+GQIK W+D+   
Sbjct: 115 GSWDGTIRLWSLTDHSPLTVLGNDLPGTATSVLSVTANQNILVAAHENGQIKAWRDDVFK 174

Query: 588 NSTAAQEGAIFSVSVKAMLIFTGGWSKTVMIQQLQGDNTSMDVIPVGSIACDSVITALTY 767
            ST    GAI +  ++   +FTGGW K V +Q+L GD   +D  P+GSI   SV+TAL  
Sbjct: 175 KSTQCHSGAILACVMEGKWLFTGGWDKIVNVQELSGDEFQVDTRPIGSIPGGSVVTALLC 234

Query: 768 WKGKLIVGQADRTIKVYHYGE 830
           W+GKL VG  DRTIKVY++G+
Sbjct: 235 WQGKLFVGHGDRTIKVYYHGK 255



 Score = 78.6 bits (192), Expect(2) = 7e-81
 Identities = 34/53 (64%), Positives = 41/53 (77%)
 Frame = +1

Query: 25  IHSFKGHEHKVMAVAFVDEGQPLCISGDNGGGICIWGISTPFSEEPIKKLGEE 183
           +H+FKGHEHKVMAV +VDE  PLCISGD GGGI +W IS P  +EP+K   E+
Sbjct: 1   MHTFKGHEHKVMAVIYVDEELPLCISGDGGGGIFLWSISVPMGKEPLKTWYEQ 53


>ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
          Length = 1815

 Score =  223 bits (568), Expect(2) = 2e-77
 Identities = 105/195 (53%), Positives = 141/195 (72%)
 Frame = +3

Query: 228  DWRYSGIHALTISGTGYFYTGNGDRSIKVWSLQNYNLSCTLTGHKSVVSTLAVCNGVLYS 407
            DWR+SGIH+L +S     YTG+GDR+IK WSL++  L CT+TGH+SVVSTLAVC+ VLYS
Sbjct: 625  DWRFSGIHSLVVSKNHSLYTGSGDRTIKAWSLKDETLICTMTGHRSVVSTLAVCDEVLYS 684

Query: 408  GSWDGTVRLWSLSDHSPLTILGENXXXXXXXXXXXXADQNMLVVADESGQIKIWKDNHLI 587
            GSWDGTVRLWSL+DHSPLT+LGE+             D+++LV A E+G IK+W+++  +
Sbjct: 685  GSWDGTVRLWSLNDHSPLTVLGEDPPAEMKSILAITVDRHLLVAAHENGCIKVWRNDVFM 744

Query: 588  NSTAAQEGAIFSVSVKAMLIFTGGWSKTVMIQQLQGDNTSMDVIPVGSIACDSVITALTY 767
            NS    +GAIF++S++   ++TGGW K V IQ+L GD   +DV   GSI C +V TA+  
Sbjct: 745  NSKTLHKGAIFAMSMQGKCLYTGGWDKNVNIQELSGDEFELDVKAYGSIPCSAVATAILC 804

Query: 768  WKGKLIVGQADRTIK 812
             +GKL VG AD++IK
Sbjct: 805  SQGKLYVGYADKSIK 819



 Score = 94.0 bits (232), Expect(2) = 2e-77
 Identities = 37/61 (60%), Positives = 53/61 (86%)
 Frame = +1

Query: 1   WSLEDFTHIHSFKGHEHKVMAVAFVDEGQPLCISGDNGGGICIWGISTPFSEEPIKKLGE 180
           WSL+DF+H+H+F+GHE+KVMA+ +VDE +PLCISGD+GGGI IWGI+ P  ++P++K  E
Sbjct: 563 WSLQDFSHLHTFRGHENKVMALVYVDEEEPLCISGDSGGGIFIWGIAAPLRQDPLRKWYE 622

Query: 181 E 183
           +
Sbjct: 623 K 623


>ref|NP_001117325.1| zinc ion binding protein [Arabidopsis thaliana]
            gi|17529236|gb|AAL38845.1| putative SecA-type chloroplast
            protein transport factor [Arabidopsis thaliana]
            gi|20465933|gb|AAM20152.1| putative SecA-type chloroplast
            transport factor protein [Arabidopsis thaliana]
            gi|110739333|dbj|BAF01579.1| hypothetical protein
            [Arabidopsis thaliana] gi|332192014|gb|AEE30135.1| zinc
            ion binding protein [Arabidopsis thaliana]
          Length = 811

 Score =  236 bits (602), Expect(2) = 3e-77
 Identities = 114/200 (57%), Positives = 143/200 (71%)
 Frame = +3

Query: 228  DWRYSGIHALTISGTGYFYTGNGDRSIKVWSLQNYNLSCTLTGHKSVVSTLAVCNGVLYS 407
            DWRY+GIHAL  S  G+ YTG+GD +IK WSLQ+ +L CT++GHKSVVSTL V NGVLYS
Sbjct: 611  DWRYTGIHALAYSEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLYS 670

Query: 408  GSWDGTVRLWSLSDHSPLTILGENXXXXXXXXXXXXADQNMLVVADESGQIKIWKDNHLI 587
            GSWDGTVRLWSLSD+S LT+LGE             AD   LV A ++G I+IW+D+ L+
Sbjct: 671  GSWDGTVRLWSLSDNSLLTVLGEETPGIVRSILSLAADDQTLVAAYQNGDIQIWRDDTLM 730

Query: 588  NSTAAQEGAIFSVSVKAMLIFTGGWSKTVMIQQLQGDNTSMDVIPVGSIACDSVITALTY 767
             S   Q GAI S++V    +FTGGW KT+ +Q+L GD  S++   VGSI   SVIT+L Y
Sbjct: 731  KSMKIQNGAILSIAVNGKWLFTGGWDKTINVQELSGDEISVNCAHVGSIPGSSVITSLLY 790

Query: 768  WKGKLIVGQADRTIKVYHYG 827
            W+GKL  G AD+TIKVY++G
Sbjct: 791  WEGKLFAGFADKTIKVYYFG 810



 Score = 80.5 bits (197), Expect(2) = 3e-77
 Identities = 29/57 (50%), Positives = 45/57 (78%)
 Frame = +1

Query: 1   WSLEDFTHIHSFKGHEHKVMAVAFVDEGQPLCISGDNGGGICIWGISTPFSEEPIKK 171
           WSL+DF+H+H+FKGH+ KVMA+  ++  +P+C+SGD GGGI +W  + P  E+P++K
Sbjct: 549 WSLKDFSHVHTFKGHQDKVMALIHIEGTEPVCVSGDGGGGIFVWSTTFPLEEQPLRK 605


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