BLASTX nr result

ID: Bupleurum21_contig00019303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019303
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337566.1| light harvesting protein 3 [Populus trichoca...   271   2e-70
ref|XP_002275690.1| PREDICTED: uncharacterized protein LOC100259...   259   8e-67
emb|CBI26582.3| unnamed protein product [Vitis vinifera]              238   1e-60
ref|XP_002511036.1| transcription factor, putative [Ricinus comm...   229   1e-57
ref|XP_004171222.1| PREDICTED: uncharacterized protein LOC101227...   224   3e-56

>ref|XP_002337566.1| light harvesting protein 3 [Populus trichocarpa]
           gi|222839577|gb|EEE77914.1| light harvesting protein 3
           [Populus trichocarpa]
          Length = 249

 Score =  271 bits (694), Expect = 2e-70
 Identities = 135/250 (54%), Positives = 177/250 (70%), Gaps = 12/250 (4%)
 Frame = -1

Query: 958 MASLTVTVSIQKACTTSYVVNKHQSKLNLSCSVATKQAAARMVTLNIEDAENLNLDKARK 779
           MAS++++ S+ + C +  V  K + +   + S+ +KQA  R VTLN+E    + + + ++
Sbjct: 1   MASISISASLHRTCGSHRVTKKQRPQARTARSLGSKQAT-RAVTLNVEGQRGVGMSEQQE 59

Query: 778 A---------EVEMKLDNGREEAHE-PEFFDSRWKEGTWDLNMFVKKGKMDWDGVIVAEA 629
                     +   KL+NG E  H  P+F D RWK+GTWDLNMFV+ GKMDWDG+I AEA
Sbjct: 60  KPALATGGSNKANDKLENGLETKHSVPKFIDERWKKGTWDLNMFVRDGKMDWDGLIEAEA 119

Query: 628 RRRKFLEVHPAVSSNQSPVLFRTSIVPWWAWISHSHLPEAELLNGRAAMVGFFMAYIVDG 449
           +RRK +E++P   +N+ PVLFR+SI+PWWAW+  S+LPEAELLNGRAAMVGFF AYIV+G
Sbjct: 120 KRRKIIELYPNTCTNEEPVLFRSSIIPWWAWLKRSYLPEAELLNGRAAMVGFFAAYIVEG 179

Query: 448 LTGLDVVGQTGNFICKXXXXXXXXXXXLFRRSQD--NLKKLVDEATFYDKQWQASWQDQE 275
           LTGLD+VGQTGNFICK           LFRR++D  NL+KLVDEATFYDKQWQASW+DQ 
Sbjct: 180 LTGLDMVGQTGNFICKTVLFVTVTGIILFRRTEDFKNLRKLVDEATFYDKQWQASWKDQN 239

Query: 274 NKSTGTSK*K 245
             +TG S+ K
Sbjct: 240 APNTGASENK 249


>ref|XP_002275690.1| PREDICTED: uncharacterized protein LOC100259582 [Vitis vinifera]
          Length = 259

 Score =  259 bits (662), Expect = 8e-67
 Identities = 132/245 (53%), Positives = 168/245 (68%), Gaps = 18/245 (7%)
 Frame = -1

Query: 955 ASLTVTVSIQKACTTSYVVNKHQSKLNLSCSVATKQAAARMVTLNIEDAENLNLDK---- 788
           +S+ +T S+Q+AC+  +V  K Q +   + S+ TKQ    +V L  E  + LN+ +    
Sbjct: 3   SSIAITASLQRACSPHHVTKKQQPQARPARSMGTKQET-HVVALETEGPKGLNIAEQEAK 61

Query: 787 -----------ARKAEVEMKLDNGRE-EAHEPEFFDSRWKEGTWDLNMFVKKGKMDWDGV 644
                      +R A+ + +  +G + E   P+F D RWK GTWDLNMFV+ GKMDWDGV
Sbjct: 62  FGFNAGSSTTTSRDAKDDDEAGSGLDTEPSAPKFSDERWKNGTWDLNMFVRDGKMDWDGV 121

Query: 643 IVAEARRRKFLEVHPAVSSNQSPVLFRTSIVPWWAWISHSHLPEAELLNGRAAMVGFFMA 464
           IVAEARRRKFLE++P  ++NQ PVLFR+SI+PWWAW+  SHL EAEL+NGRAAMVGFFMA
Sbjct: 122 IVAEARRRKFLEMYPESATNQEPVLFRSSIIPWWAWMMRSHLQEAELINGRAAMVGFFMA 181

Query: 463 YIVDGLTGLDVVGQTGNFICKXXXXXXXXXXXLFRRSQ--DNLKKLVDEATFYDKQWQAS 290
           Y+VD LTGLDVVGQTGN ICK            FRR+Q  D+L+KL DEAT YDKQWQ+S
Sbjct: 182 YLVDALTGLDVVGQTGNLICKAGLLVTVMGVIFFRRAQDFDSLRKLADEATLYDKQWQSS 241

Query: 289 WQDQE 275
           WQDQ+
Sbjct: 242 WQDQD 246


>emb|CBI26582.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  238 bits (608), Expect = 1e-60
 Identities = 111/158 (70%), Positives = 127/158 (80%), Gaps = 2/158 (1%)
 Frame = -1

Query: 742 EAHEPEFFDSRWKEGTWDLNMFVKKGKMDWDGVIVAEARRRKFLEVHPAVSSNQSPVLFR 563
           E   P+F D RWK GTWDLNMFV+ GKMDWDGVIVAEARRRKFLE++P  ++NQ PVLFR
Sbjct: 56  EPSAPKFSDERWKNGTWDLNMFVRDGKMDWDGVIVAEARRRKFLEMYPESATNQEPVLFR 115

Query: 562 TSIVPWWAWISHSHLPEAELLNGRAAMVGFFMAYIVDGLTGLDVVGQTGNFICKXXXXXX 383
           +SI+PWWAW+  SHL EAEL+NGRAAMVGFFMAY+VD LTGLDVVGQTGN ICK      
Sbjct: 116 SSIIPWWAWMMRSHLQEAELINGRAAMVGFFMAYLVDALTGLDVVGQTGNLICKAGLLVT 175

Query: 382 XXXXXLFRRSQ--DNLKKLVDEATFYDKQWQASWQDQE 275
                 FRR+Q  D+L+KL DEAT YDKQWQ+SWQDQ+
Sbjct: 176 VMGVIFFRRAQDFDSLRKLADEATLYDKQWQSSWQDQD 213


>ref|XP_002511036.1| transcription factor, putative [Ricinus communis]
           gi|223550151|gb|EEF51638.1| transcription factor,
           putative [Ricinus communis]
          Length = 240

 Score =  229 bits (583), Expect = 1e-57
 Identities = 119/248 (47%), Positives = 159/248 (64%), Gaps = 12/248 (4%)
 Frame = -1

Query: 958 MASLTVTVSIQKACTTSYVVNKHQSKLNLSCSVATKQAAARMVTLNIEDAENLN------ 797
           MAS+ ++ S+Q+AC++++V  K Q +   +  + TKQ    +VTLN+E  + L+      
Sbjct: 1   MASVAISASLQRACSSNHVTKKQQPQARPARPLGTKQVT-HVVTLNVEGQKGLSISEQQE 59

Query: 796 ---LDKARKAEVEMKLDNGRE-EAHEPEFFDSRWKEGTWDLNMFVKKGKMDWDGVIVAEA 629
              LD       + K D+G E E+  P F D RW+ G WDLNMFVK            EA
Sbjct: 60  KPPLDANGSKRADDKSDHGPEAESSTPTFIDERWQMGNWDLNMFVKD-----------EA 108

Query: 628 RRRKFLEVHPAVSSNQSPVLFRTSIVPWWAWISHSHLPEAELLNGRAAMVGFFMAYIVDG 449
           +RRKFLE++P  S+N+ PVLFR+SI+PWW W+  S+LPEAEL+NGRAAMVGFFM+Y+VD 
Sbjct: 109 KRRKFLELYPEASTNEEPVLFRSSIIPWWVWLKRSYLPEAELINGRAAMVGFFMSYVVDA 168

Query: 448 LTGLDVVGQTGNFICKXXXXXXXXXXXLFRRSQD--NLKKLVDEATFYDKQWQASWQDQE 275
           LTGLD+VGQ GN +CK           L RR++D  NL+ L DEAT YDKQWQ+SW+DQ 
Sbjct: 169 LTGLDMVGQAGNLVCKAGLLVTVISIILLRRTEDFKNLRNLADEATLYDKQWQSSWKDQN 228

Query: 274 NKSTGTSK 251
             ST  S+
Sbjct: 229 AASTSGSE 236


>ref|XP_004171222.1| PREDICTED: uncharacterized protein LOC101227616 [Cucumis sativus]
          Length = 256

 Score =  224 bits (571), Expect = 3e-56
 Identities = 115/228 (50%), Positives = 152/228 (66%), Gaps = 8/228 (3%)
 Frame = -1

Query: 943 VTVSIQ-KACTTSYVVNKHQSKLNLSCSVA--TKQAAARMVTLNIED--AENLNLDKARK 779
           +  SIQ K+C        H +K   S +    T +  + +  +N +D  A+      A  
Sbjct: 26  IAKSIQFKSCLHEEKQRVHLAKPGYSSTTKNPTPKVISTLDVVNRDDGAAQQYRRGNAAS 85

Query: 778 AEVEMKLDNGREEAHEPE-FFDSRWKEGTWDLNMFVKKGKMDWDGVIVAEARRRKFLEVH 602
           A V+ + DN  +  +  E F D RWK GTWDLNMFV+ GKMDW+GVIV EA+RRKFLE+H
Sbjct: 86  AVVKEEEDNNDDWNNNGERFTDKRWKNGTWDLNMFVQNGKMDWEGVIVEEAKRRKFLEIH 145

Query: 601 PAVSSNQSPVLFRTSIVPWWAWISHSHLPEAELLNGRAAMVGFFMAYIVDGLTGLDVVGQ 422
           P  ++NQ PV+FR+SI+PWW W++ S+LP+AELLNGRAAM+GFFM Y VD LTG+ +VGQ
Sbjct: 146 PEAATNQEPVVFRSSIIPWWVWLTKSYLPQAELLNGRAAMIGFFMGYAVDALTGVGIVGQ 205

Query: 421 TGNFICKXXXXXXXXXXXLFRRSQD--NLKKLVDEATFYDKQWQASWQ 284
           +GNFICK           LFR+S+D  NL+ + +EATFYDKQWQ+SWQ
Sbjct: 206 SGNFICKTALFLTVIGVLLFRQSEDIENLRNIAEEATFYDKQWQSSWQ 253


Top