BLASTX nr result

ID: Bupleurum21_contig00019300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019300
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694...    94   1e-17
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thal...    89   4e-16
gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arab...    89   4e-16

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score =  102 bits (254), Expect = 4e-20
 Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
 Frame = +3

Query: 3    RFPLALANFLPRGLSDHSPTAVSLGIPFQRIKKSFQFFNHLISDPDFLDQVSLAWSEHIS 182
            +FPL+ A FLP G+SDHSP  V +    Q  KK F+FF+  +   +F+  V   W ++  
Sbjct: 588  KFPLSEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDMWMDHDEFMPLVKKVWDQNSR 647

Query: 183  GSAWFVLTSKLKKVNQSMIALN-RQTGNLHINVESARNNLLNFQSNL-LVTDSPXXXXXX 356
            G   + L  KL+K+ Q +   N     N+   V  A+N +   Q  L    ++P      
Sbjct: 648  GCPMYQLCCKLRKLKQELKLFNMAHFSNISDRVRDAKNKMDKAQQALHTAHENPILCMRE 707

Query: 357  XXXSNAYRKALNDEEIFLQQKYRVCWLKNGDGNNSFFHSYCRKRWNLNKILALRDEAGNL 536
                + Y   +  EE F +QK R+ WL  GD N S+FH     R N NK+L+L  E G +
Sbjct: 708  RDVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRQNRNKLLSLTREDGEV 767

Query: 537  LTQHKDIAS 563
            + + + + S
Sbjct: 768  VERQEAVKS 776


>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
           putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 59/187 (31%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
 Frame = +3

Query: 6   FPLALANFLPRGLSDHSPTAVSLGIPFQRIKKSFQFFNHLISDPDFLDQVSLAW-SEHIS 182
           FP +   F P   SDH+   V L +   + K+ F+FFN L+ +P+FL+ V   W S ++ 
Sbjct: 208 FPSSFGLFGPPDFSDHASCGVVLELDPIKAKRPFKFFNFLLKNPEFLNLVWDVWYSTNVV 267

Query: 183 GSAWFVLTSKLKKVNQSMIALNRQT-GNLHINVESARNNLLNFQSNLLVTDSPXXXXXXX 359
           GS+ F ++ KLK + + +   +R    NL    E A   LL+FQ+  L   S        
Sbjct: 268 GSSMFRVSKKLKALKKPIKDFSRLNYSNLEKRTEEAHETLLSFQNLTLDNPSLENAAHEL 327

Query: 360 XXSNAYRKALNDEEIFLQQKYRVCWLKNGDGNNSFFHSYCRKRWNLNKILALRDEAGNLL 539
                ++     EE F +Q+ RV W   GDGN  +FH     R ++N I  L D++G  +
Sbjct: 328 EAQRKWQILATAEESFFRQRSRVTWFAEGDGNTRYFHRMADSRKSVNTITTLVDDSGTQI 387

Query: 540 TQHKDIA 560
              + IA
Sbjct: 388 DSQQGIA 394


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 62/188 (32%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
 Frame = +3

Query: 6   FPLALANFLPRGLSDHSPTAVSLGIPFQRIKKSFQFFNHLISDPDFLDQVSLAWSEHISG 185
           FPL+   FLP G+SDHSP  V +    Q IKK F+FF+       ++DQ S        G
Sbjct: 196 FPLSEVRFLPSGISDHSPMVVKVIGNDQNIKKPFRFFDM------WMDQNS-------GG 242

Query: 186 SAWFVLTSKLKKVNQSMIALNR-QTGNLHINVESARNNLLNFQSNLLVT-DSPXXXXXXX 359
              + L   LKK+ Q +   N     N+   V+ A+N +   Q  L    ++P       
Sbjct: 243 CPMYQLCCNLKKLKQELKLFNMAHFSNISDRVKDAKNEMDKAQQALHTAHENPILCMRER 302

Query: 360 XXSNAYRKALNDEEIFLQQKYRVCWLKNGDGNNSFFHSYCRKRWNLNKILALRDEAGNLL 539
              + Y   +  EE F +QK R+ WL  GD N S+FH     R N NK+L+L  E G ++
Sbjct: 303 DVVHKYASTVRAEESFFKQKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTREDGEVV 362

Query: 540 TQHKDIAS 563
             H+ + S
Sbjct: 363 EGHEAVKS 370


>gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 668

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 62/177 (35%), Positives = 87/177 (49%), Gaps = 4/177 (2%)
 Frame = +3

Query: 6   FPLALANFLPRGLSDHSPTAVSLGIPFQRIKKSFQFFNHLISDPDFLDQVSLAWSEHIS- 182
           FP A+A F   G+SDHSP  + L    +R KK F++F+ L + P FL  +++AW E I  
Sbjct: 235 FPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPV 294

Query: 183 GSAWFVLTSKLKKVNQSMIALNRQ-TGNLHINVESARNNLLNFQSNLLVTDSPXXXXXXX 359
           GS  F L   LK   +    LNRQ  GN+    + A ++L + QS LL   S        
Sbjct: 295 GSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEH 354

Query: 360 XXSNAYRKALNDEEIFLQQKYRVCWLKNGDGNNSFFHS--YCRKRWNLNKILALRDE 524
                +       E F +QK R+ WL++GD N  FFH      +  NL K L + D+
Sbjct: 355 VARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDD 411


>gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arabidopsis thaliana]
          Length = 602

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 62/177 (35%), Positives = 87/177 (49%), Gaps = 4/177 (2%)
 Frame = +3

Query: 6   FPLALANFLPRGLSDHSPTAVSLGIPFQRIKKSFQFFNHLISDPDFLDQVSLAWSEHIS- 182
           FP A+A F   G+SDHSP  + L    +R KK F++F+ L + P FL  +++AW E I  
Sbjct: 235 FPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEEQIPV 294

Query: 183 GSAWFVLTSKLKKVNQSMIALNRQ-TGNLHINVESARNNLLNFQSNLLVTDSPXXXXXXX 359
           GS  F L   LK   +    LNRQ  GN+    + A ++L + QS LL   S        
Sbjct: 295 GSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEH 354

Query: 360 XXSNAYRKALNDEEIFLQQKYRVCWLKNGDGNNSFFHS--YCRKRWNLNKILALRDE 524
                +       E F +QK R+ WL++GD N  FFH      +  NL K L + D+
Sbjct: 355 VARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDD 411


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