BLASTX nr result

ID: Bupleurum21_contig00019287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019287
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321253.1| multidrug resistance protein ABC transporter...    87   1e-15
ref|XP_002265346.2| PREDICTED: ABC transporter C family member 9...    79   4e-13
ref|XP_003530102.1| PREDICTED: ABC transporter C family member 9...    78   6e-13
ref|XP_003637913.1| ABC transporter C family member, partial [Me...    73   2e-11
ref|XP_003521031.1| PREDICTED: ABC transporter C family member 9...    71   1e-10

>ref|XP_002321253.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222862026|gb|EEE99568.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1476

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/83 (49%), Positives = 56/83 (67%)
 Frame = -2

Query: 250 WWMCSFVISFGRAVIEVHFAIVNHKDISISVYLDLFALLAYTCLLVISVRGKTGIVINLP 71
           WW+CSF++S     ++++F I NH  + +  Y +LFALL  T LL IS RGKTGIV N  
Sbjct: 136 WWLCSFMLSIVCTSLDINFKITNHGHLRLRDYAELFALLPSTFLLAISFRGKTGIVFNAF 195

Query: 70  NGISEPLLNGDSAKKSDDKRDCP 2
           NG+++PLL+  S K SD KR+ P
Sbjct: 196 NGVTDPLLHEKSDKDSDTKRESP 218


>ref|XP_002265346.2| PREDICTED: ABC transporter C family member 9-like [Vitis vinifera]
          Length = 1484

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/83 (42%), Positives = 52/83 (62%)
 Frame = -2

Query: 250 WWMCSFVISFGRAVIEVHFAIVNHKDISISVYLDLFALLAYTCLLVISVRGKTGIVINLP 71
           +W+CSF++S      +VHF + N+  + +  Y D   LLA TCL  IS+RGKTG V+   
Sbjct: 144 YWLCSFLLSVIHTAFDVHFLVTNNGHLRMQDYTDFLGLLASTCLFGISIRGKTGTVLISQ 203

Query: 70  NGISEPLLNGDSAKKSDDKRDCP 2
           NG+++PLLNG +   S+ K + P
Sbjct: 204 NGLADPLLNGKTDNHSEGKTESP 226


>ref|XP_003530102.1| PREDICTED: ABC transporter C family member 9-like [Glycine max]
          Length = 1519

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/83 (42%), Positives = 50/83 (60%)
 Frame = -2

Query: 250 WWMCSFVISFGRAVIEVHFAIVNHKDISISVYLDLFALLAYTCLLVISVRGKTGIVINLP 71
           WW+CSF++      +  HF+++N+  I +    D   LLA TCLLVIS RGKTG V+   
Sbjct: 155 WWLCSFILCIITTALHAHFSVINNGQIGLRECADFLGLLASTCLLVISTRGKTGTVLLAT 214

Query: 70  NGISEPLLNGDSAKKSDDKRDCP 2
           NG SEPLL   + + S+  ++ P
Sbjct: 215 NGASEPLLGEKAERHSECLKESP 237


>ref|XP_003637913.1| ABC transporter C family member, partial [Medicago truncatula]
           gi|355503848|gb|AES85051.1| ABC transporter C family
           member, partial [Medicago truncatula]
          Length = 165

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/79 (49%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -2

Query: 250 WWMCSFVISFGRAVIEVHFAIVNHKDISISVYLDLFALLAYTCLLVISVRGKTGIVINLP 71
           WW  SF++S     + VHF+I N   I I  Y D   L+  TCLLV+S RGKTGIVI   
Sbjct: 45  WWFFSFLLSIISTALHVHFSIKNKGVIGIKEYADFLGLVVSTCLLVVSTRGKTGIVIIAT 104

Query: 70  NG-ISEPLLNGDSAKKSDD 17
           NG ISEPLL   + K S +
Sbjct: 105 NGSISEPLLEEKNEKHSSE 123


>ref|XP_003521031.1| PREDICTED: ABC transporter C family member 9-like [Glycine max]
          Length = 1520

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
 Frame = -2

Query: 250 WWMCSFVISFGRAVIEVHFAIVNHKDISISVYLDLFALLAYTCLLVISVRGKTGIVINLP 71
           WW+C+F++      ++VHF++ N+  I +    D    LA TCLLVIS RGKTG V+   
Sbjct: 153 WWLCNFILCIISTALQVHFSVTNNGQIGLRECADFLGFLASTCLLVISTRGKTGTVLLAT 212

Query: 70  NG-ISEPLLNGDSAKK 26
           NG  SEPLL G+ A+K
Sbjct: 213 NGAASEPLL-GEKAEK 227


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