BLASTX nr result

ID: Bupleurum21_contig00019280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019280
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315866.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_002311520.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_002527778.1| conserved hypothetical protein [Ricinus comm...   101   6e-20
ref|XP_002284819.1| PREDICTED: protein PLANT CADMIUM RESISTANCE ...   100   1e-19
emb|CAN82486.1| hypothetical protein VITISV_006802 [Vitis vinifera]   100   1e-19

>ref|XP_002315866.1| predicted protein [Populus trichocarpa] gi|222864906|gb|EEF02037.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  108 bits (271), Expect = 3e-22
 Identities = 45/70 (64%), Positives = 55/70 (78%), Gaps = 3/70 (4%)
 Frame = +3

Query: 21  LRQQFFLHETPCADCLVHCCCEWCALCQEYRELKNQGYELSMGWHGNAEKHKRDTQMV-- 194
           +RQQ+ L ETPC DCLVHCCCE+C+LCQEYRELK++GY+L+MGWHGN EK  R  +M   
Sbjct: 124 MRQQYLLRETPCGDCLVHCCCEYCSLCQEYRELKSRGYDLAMGWHGNVEKKNRSVEMASV 183

Query: 195 -PVSTEGMTR 221
            P   EGM+R
Sbjct: 184 PPTVEEGMSR 193


>ref|XP_002311520.1| predicted protein [Populus trichocarpa] gi|222851340|gb|EEE88887.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  102 bits (254), Expect = 3e-20
 Identities = 44/70 (62%), Positives = 54/70 (77%), Gaps = 3/70 (4%)
 Frame = +3

Query: 21  LRQQFFLHETPCADCLVHCCCEWCALCQEYRELKNQGYELSMGWHGNAEKHKRDTQMV-- 194
           +RQQ+ L ETPC DCLVHC CE C+LCQEYRELK++GY+L+MGWHGN EK  R ++M   
Sbjct: 123 MRQQYLLRETPCGDCLVHCFCECCSLCQEYRELKSRGYDLAMGWHGNVEKKNRSSEMASV 182

Query: 195 -PVSTEGMTR 221
            PV   GM+R
Sbjct: 183 PPVVEGGMSR 192


>ref|XP_002527778.1| conserved hypothetical protein [Ricinus communis]
           gi|223532813|gb|EEF34588.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  101 bits (252), Expect = 6e-20
 Identities = 43/72 (59%), Positives = 53/72 (73%)
 Frame = +3

Query: 6   LYCLILRQQFFLHETPCADCLVHCCCEWCALCQEYRELKNQGYELSMGWHGNAEKHKRDT 185
           +Y   LR Q+ L E+PC DCLVHCCCE CALCQEYRELK++G+++S+GW GN E+ K   
Sbjct: 76  MYRSKLRHQYMLPESPCNDCLVHCCCEACALCQEYRELKSRGFDMSIGWQGNVERQKGGV 135

Query: 186 QMVPVSTEGMTR 221
            M PV   GMTR
Sbjct: 136 AMAPVFQAGMTR 147


>ref|XP_002284819.1| PREDICTED: protein PLANT CADMIUM RESISTANCE 2 [Vitis vinifera]
           gi|297737652|emb|CBI26853.3| unnamed protein product
           [Vitis vinifera]
          Length = 201

 Score =  100 bits (249), Expect = 1e-19
 Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 7/74 (9%)
 Frame = +3

Query: 21  LRQQFFLHETPCADCLVHCCCEWCALCQEYRELKNQGYELSMGWHGNAEKHKRDTQM--- 191
           +RQQ+ L  +PC DCLVHCCCE+C+LCQEYRELKN+G+++++GWHGN E+  R  +M   
Sbjct: 128 MRQQYLLKPSPCGDCLVHCCCEYCSLCQEYRELKNRGFDMTIGWHGNVERQNRGVEMSSM 187

Query: 192 ----VPVSTEGMTR 221
                P   EGM+R
Sbjct: 188 SSQTAPTMEEGMSR 201


>emb|CAN82486.1| hypothetical protein VITISV_006802 [Vitis vinifera]
          Length = 180

 Score =  100 bits (249), Expect = 1e-19
 Identities = 40/74 (54%), Positives = 54/74 (72%), Gaps = 7/74 (9%)
 Frame = +3

Query: 21  LRQQFFLHETPCADCLVHCCCEWCALCQEYRELKNQGYELSMGWHGNAEKHKRDTQM--- 191
           +RQQ+ L  +PC DCLVHCCCE+C+LCQEYRELKN+G+++++GWHGN E+  R  +M   
Sbjct: 107 MRQQYLLKPSPCGDCLVHCCCEYCSLCQEYRELKNRGFDMTIGWHGNVERQNRGVEMSSM 166

Query: 192 ----VPVSTEGMTR 221
                P   EGM+R
Sbjct: 167 SSQTAPTMEEGMSR 180


Top