BLASTX nr result

ID: Bupleurum21_contig00019239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019239
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ82702.1| potyviral capsid protein interacting protein 2a [...   209   3e-52
gb|AAQ82703.1| potyviral capsid protein interacting protein 2b [...   207   1e-51
gb|AAQ82701.1| potyviral capsid protein interacting protein 1 [N...   204   1e-50
emb|CBI15287.3| unnamed protein product [Vitis vinifera]              195   7e-48
ref|XP_002270193.1| PREDICTED: dnaJ homolog subfamily B member 1...   189   5e-46

>gb|AAQ82702.1| potyviral capsid protein interacting protein 2a [Nicotiana tabacum]
          Length = 305

 Score =  209 bits (532), Expect = 3e-52
 Identities = 108/160 (67%), Positives = 127/160 (79%), Gaps = 6/160 (3%)
 Frame = -1

Query: 464 MGIDYYNILNIHRSASPEELKRAYKKLAMKWHPDKNSTNNKIEAESKFKQISEAYDVLSD 285
           MG+DYYN+L + R+AS E+LKR+YK+LAMKWHPDKNS N K EAE+KFKQISEAYDVLSD
Sbjct: 1   MGLDYYNVLKVSRNASEEDLKRSYKRLAMKWHPDKNSQNKK-EAEAKFKQISEAYDVLSD 59

Query: 284 PKKRQIYDLYGEEALNSGLFPPTSPSST------FKFNRRDAAEIFEELFGGSETKNCSN 123
           P+KRQIYD+YG++AL SG F   SP+S       F+FN RDA  IF E FGGS     ++
Sbjct: 60  PQKRQIYDVYGDDALKSGQFASASPTSAGSNARGFRFNTRDAEAIFAEFFGGS---GSNS 116

Query: 122 GDGEIRKASVVENKLPCSLEELYKGSKRKMKISRTVLDDS 3
           G G  RKA+ VENKLPCSLEELYKGS+RKMKISR +LDDS
Sbjct: 117 GAGVGRKAAPVENKLPCSLEELYKGSRRKMKISRILLDDS 156


>gb|AAQ82703.1| potyviral capsid protein interacting protein 2b [Nicotiana tabacum]
          Length = 305

 Score =  207 bits (527), Expect = 1e-51
 Identities = 106/160 (66%), Positives = 128/160 (80%), Gaps = 6/160 (3%)
 Frame = -1

Query: 464 MGIDYYNILNIHRSASPEELKRAYKKLAMKWHPDKNSTNNKIEAESKFKQISEAYDVLSD 285
           MG+DYY++L + R+AS E+LKR+YK+LAMKWHPDKNS N K EAE+KFKQISEAYDVLSD
Sbjct: 1   MGLDYYDVLKVSRNASEEDLKRSYKRLAMKWHPDKNSQNKK-EAEAKFKQISEAYDVLSD 59

Query: 284 PKKRQIYDLYGEEALNSGLFPPTSPSST------FKFNRRDAAEIFEELFGGSETKNCSN 123
           P+KRQIYD+YG++AL SG F   SP+S       F+FN RDA  IF E FGGS++ + + 
Sbjct: 60  PQKRQIYDVYGDDALKSGQFASASPTSAGSNGRGFRFNTRDAEAIFAEFFGGSDSNSAA- 118

Query: 122 GDGEIRKASVVENKLPCSLEELYKGSKRKMKISRTVLDDS 3
             G  RKA+ VENKLPCSLEELYKGS+RKMKISR +LDDS
Sbjct: 119 --GVGRKAAPVENKLPCSLEELYKGSRRKMKISRILLDDS 156


>gb|AAQ82701.1| potyviral capsid protein interacting protein 1 [Nicotiana tabacum]
          Length = 306

 Score =  204 bits (518), Expect = 1e-50
 Identities = 105/158 (66%), Positives = 126/158 (79%), Gaps = 6/158 (3%)
 Frame = -1

Query: 464 MGIDYYNILNIHRSASPEELKRAYKKLAMKWHPDKNSTNNKIEAESKFKQISEAYDVLSD 285
           MG+DYY IL + R+AS E+LK++YK+LAMKWHPDKNS     EAE+KFKQISEAYDVLSD
Sbjct: 1   MGVDYYKILKVSRNASEEDLKKSYKRLAMKWHPDKNSEK---EAEAKFKQISEAYDVLSD 57

Query: 284 PKKRQIYDLYGEEALNSGLFPPTSPSS----TFKFNRRDAAEIFEELFGGSE--TKNCSN 123
           P+KRQIYD+YG+EAL SG F P+SP +     FKF+ RDA +IF E FGGS+  +++ + 
Sbjct: 58  PQKRQIYDIYGDEALKSGQFDPSSPMNGNGRGFKFDSRDAEDIFAEFFGGSDGYSRSPTG 117

Query: 122 GDGEIRKASVVENKLPCSLEELYKGSKRKMKISRTVLD 9
           G   IRK + VENKLPCSLEELYKGSKRKMKISR VLD
Sbjct: 118 GTVRIRKPAPVENKLPCSLEELYKGSKRKMKISRIVLD 155


>emb|CBI15287.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  195 bits (495), Expect = 7e-48
 Identities = 99/159 (62%), Positives = 125/159 (78%), Gaps = 2/159 (1%)
 Frame = -1

Query: 479 VYKVKMGIDYYNILNIHRSASPEELKRAYKKLAMKWHPDKNSTNNKIEAESKFKQISEAY 300
           + + +MG+DYYNIL ++R+AS ++L+RAY++LAM WHPDKN +N + EAE+KFKQISEAY
Sbjct: 6   IMEKEMGVDYYNILKVNRNASEDDLRRAYRRLAMIWHPDKNPSNKR-EAEAKFKQISEAY 64

Query: 299 DVLSDPKKRQIYDLYGEEALNSGLFPPTSPSSTFKFNRRDAAEIFEELFG--GSETKNCS 126
           DVLSDP+KRQIYDLYGEEAL SG      P+ +F+FN RDA +I+EE FG  GS T    
Sbjct: 65  DVLSDPQKRQIYDLYGEEALKSGQHHNHHPNPSFRFNPRDADDIYEEFFGPDGSGT-GAG 123

Query: 125 NGDGEIRKASVVENKLPCSLEELYKGSKRKMKISRTVLD 9
            G G   +A+ VEN LPCSLEELYKG+K+KMKISRT+ D
Sbjct: 124 GGGGGRNRAAPVENLLPCSLEELYKGAKKKMKISRTISD 162


>ref|XP_002270193.1| PREDICTED: dnaJ homolog subfamily B member 13-like isoform 1 [Vitis
           vinifera]
          Length = 339

 Score =  189 bits (479), Expect = 5e-46
 Identities = 103/187 (55%), Positives = 126/187 (67%), Gaps = 35/187 (18%)
 Frame = -1

Query: 464 MGIDYYNILNIHRSASPEELKRAYKKLAMKWHPDKNSTNNKIEAESKFKQISEAYDVLSD 285
           MG+DYYNIL ++R+AS ++L+RAY++LAM WHPDKN +N + EAE+KFKQISEAYDVLSD
Sbjct: 1   MGVDYYNILKVNRNASEDDLRRAYRRLAMIWHPDKNPSNKR-EAEAKFKQISEAYDVLSD 59

Query: 284 PKKRQIYDLYGEEALNSGLFPPT-------------SPSSTFKFNRRDAAEIFEELFG-- 150
           P+KRQIYDLYGEEAL SG  PP               P+ +F+FN RDA +I+EE FG  
Sbjct: 60  PQKRQIYDLYGEEALKSGQVPPPPASTRGGPQHHNHHPNPSFRFNPRDADDIYEEFFGPD 119

Query: 149 GS--------------------ETKNCSNGDGEIRKASVVENKLPCSLEELYKGSKRKMK 30
           GS                     T N   G   +RKA+ VEN LPCSLEELYKG+K+KMK
Sbjct: 120 GSGTGAGGGGGGRNRVYKDGFFRTSNGDYGSQALRKAAPVENLLPCSLEELYKGAKKKMK 179

Query: 29  ISRTVLD 9
           ISRT+ D
Sbjct: 180 ISRTISD 186


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