BLASTX nr result

ID: Bupleurum21_contig00019224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019224
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001030865.1| uncharacterized protein [Arabidopsis thalian...    60   8e-07

>ref|NP_001030865.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98961793|gb|ABF59226.1| unknown protein [Arabidopsis
           thaliana] gi|332645894|gb|AEE79415.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 146

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
 Frame = +2

Query: 560 LFLSLFQASSAEML--IIPTHSSGSPVRNPEQEYVPKDSKANEKEKESVFQERSEHP--L 727
           LF S+F   SA+ L   +   S G  V+   Q    K  ++N+KEK+S + E +E P  L
Sbjct: 42  LFKSIFPPPSADQLGRQVDFASQGGHVKY--QSPNAKGERSNKKEKKSYYNEETEPPCHL 99

Query: 728 CSSIYYGSQEDIPASYFTLDKEENKNGIEGISSKEVDSTTDWWKGSFYY 874
            SS+YYG QE   ++  T      K+G EG S +   S  +WW+GS YY
Sbjct: 100 SSSLYYGGQETYSSTTTTTHDTYKKDGEEGDSKRA--SRGNWWEGSLYY 146


Top