BLASTX nr result

ID: Bupleurum21_contig00019183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019183
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putativ...   114   8e-24
ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   110   2e-22
ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   110   2e-22
ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   110   2e-22
ref|XP_002301895.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22

>ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 1173

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/66 (83%), Positives = 59/66 (89%)
 Frame = -1

Query: 270  ITTRGQYFPHGKNPGPGERKLYLFIEGPSEQSVKKAKAELKRTLEDITTQASSLPGSAQP 91
            ITTRGQ+FP G+ PGPGERKLYLFIEGPSE SVKKAKAELKR LEDIT QA SLPG AQP
Sbjct: 1108 ITTRGQFFPPGRIPGPGERKLYLFIEGPSETSVKKAKAELKRVLEDITNQALSLPGGAQP 1167

Query: 90   GRYSLV 73
            GRYS++
Sbjct: 1168 GRYSVI 1173


>ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            42-like [Cucumis sativus]
          Length = 1098

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/66 (80%), Positives = 58/66 (87%)
 Frame = -1

Query: 270  ITTRGQYFPHGKNPGPGERKLYLFIEGPSEQSVKKAKAELKRTLEDITTQASSLPGSAQP 91
            ITTRGQ+FP GK  GPGERKLYLFIEGP+EQSVK+AKAELKR LEDIT Q  SLPG +QP
Sbjct: 1033 ITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGGSQP 1092

Query: 90   GRYSLV 73
            GRYS+V
Sbjct: 1093 GRYSVV 1098


>ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
            [Cucumis sativus]
          Length = 1040

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/66 (80%), Positives = 58/66 (87%)
 Frame = -1

Query: 270  ITTRGQYFPHGKNPGPGERKLYLFIEGPSEQSVKKAKAELKRTLEDITTQASSLPGSAQP 91
            ITTRGQ+FP GK  GPGERKLYLFIEGP+EQSVK+AKAELKR LEDIT Q  SLPG +QP
Sbjct: 975  ITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGGSQP 1034

Query: 90   GRYSLV 73
            GRYS+V
Sbjct: 1035 GRYSVV 1040


>ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
            [Cucumis sativus]
          Length = 1118

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/66 (80%), Positives = 58/66 (87%)
 Frame = -1

Query: 270  ITTRGQYFPHGKNPGPGERKLYLFIEGPSEQSVKKAKAELKRTLEDITTQASSLPGSAQP 91
            ITTRGQ+FP GK  GPGERKLYLFIEGP+EQSVK+AKAELKR LEDIT Q  SLPG +QP
Sbjct: 1053 ITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGGSQP 1112

Query: 90   GRYSLV 73
            GRYS+V
Sbjct: 1113 GRYSVV 1118


>ref|XP_002301895.1| predicted protein [Populus trichocarpa] gi|222843621|gb|EEE81168.1|
            predicted protein [Populus trichocarpa]
          Length = 1112

 Score =  108 bits (271), Expect = 3e-22
 Identities = 51/66 (77%), Positives = 57/66 (86%)
 Frame = -1

Query: 270  ITTRGQYFPHGKNPGPGERKLYLFIEGPSEQSVKKAKAELKRTLEDITTQASSLPGSAQP 91
            ITTRGQ+FP GK PGPGERKLYLFIEGP+EQSVK+AKA+LKR LEDIT Q   LPG  QP
Sbjct: 1047 ITTRGQFFPPGKVPGPGERKLYLFIEGPTEQSVKRAKADLKRVLEDITNQTYQLPGGTQP 1106

Query: 90   GRYSLV 73
            G+YS+V
Sbjct: 1107 GKYSVV 1112


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