BLASTX nr result

ID: Bupleurum21_contig00019178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019178
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511054.1| Protein FRIGIDA, putative [Ricinus communis]...   246   4e-63
gb|ABY51734.1| FRIGIDA [Arabidopsis lyrata subsp. petraea] gi|16...   237   3e-60
gb|AFJ66172.1| hypothetical protein 11M19.16 [Arabidopsis halleri]    236   4e-60
gb|ABY51697.1| FRIGIDA [Arabidopsis lyrata subsp. petraea] gi|16...   236   4e-60
gb|ABY51977.1| FRIGIDA [Arabidopsis lyrata subsp. lyrata]             236   7e-60

>ref|XP_002511054.1| Protein FRIGIDA, putative [Ricinus communis]
            gi|223550169|gb|EEF51656.1| Protein FRIGIDA, putative
            [Ricinus communis]
          Length = 607

 Score =  246 bits (629), Expect = 4e-63
 Identities = 137/308 (44%), Positives = 189/308 (61%), Gaps = 2/308 (0%)
 Frame = +1

Query: 4    EVPKALKLSANPAKMVMECFGKFYLQGRRAYTKDSPMVSGREASILVLEYFLLMENDGGG 183
            EVP ALK +  PAK+V +CFG FYLQG RAYTKDSPMV GR+ASILVLE FLL+ +DG  
Sbjct: 167  EVPTALKYAPKPAKLVFDCFGGFYLQGSRAYTKDSPMVPGRKASILVLELFLLILDDG-- 224

Query: 184  VEIGDEVKQEAYSAAVAWRKRLWSEGGLYRACDADARGLLLLISCYGIPPGFQIQDIIDL 363
            ++   +++QEA  AA AWRKRL +EGG+ +AC+ DARGLLL + C+GIP  F   DI DL
Sbjct: 225  IQFDSDLRQEAQQAAAAWRKRLIAEGGVSKACEIDARGLLLFVGCFGIPKVFTSGDIWDL 284

Query: 364  IRSCNINRISAALRCSPHLLAKIPEIIEQMLKNRREVEAVDIVYTFDFQDRYPPKTVLKS 543
            IRS N+ +IS AL+ S  L+ K+ +I+E+M+ N  ++EA+D+ YTF  +D++PP+ +L S
Sbjct: 285  IRSSNLQQISDALKRSHVLVTKVSDILERMMNNGMKIEAIDVAYTFGIEDKFPPQKLLTS 344

Query: 544  FLSKANEIAKRKRTEADDLSAVVIXXXXXXXXXXXXXXC--WENHKIDPAKSFPDLNISE 717
            FL  + E  KR+R EA++ S V++                  E  K+DP K  P   ++E
Sbjct: 345  FLRDSKEALKRRRREANN-SPVLLKEASQKHLSTLKSAMKFLEGRKLDPKKLLPGWQVTE 403

Query: 718  KISNLEKEITVLDKKVREDAATXXXXXXXXXXXXXXXQDARRLHFPGHDPILHNAVGQAA 897
            KI  LEKEI  L++K+ +  A                Q+ +RL F G   I   + G   
Sbjct: 404  KIDKLEKEIADLNRKIDDKVAPKRKADENEFSINLKSQEVKRLRFTGSPLISSPSFGLHE 463

Query: 898  ERSSFPGH 921
            +R   P H
Sbjct: 464  QR--VPSH 469


>gb|ABY51734.1| FRIGIDA [Arabidopsis lyrata subsp. petraea]
           gi|164371728|gb|ABY51737.1| FRIGIDA [Arabidopsis lyrata
           subsp. petraea] gi|164371738|gb|ABY51742.1| FRIGIDA
           [Arabidopsis lyrata subsp. petraea]
           gi|164371748|gb|ABY51747.1| FRIGIDA [Arabidopsis lyrata
           subsp. petraea] gi|164371774|gb|ABY51760.1| FRIGIDA
           [Arabidopsis lyrata subsp. petraea]
           gi|164371776|gb|ABY51761.1| FRIGIDA [Arabidopsis lyrata
           subsp. petraea]
          Length = 614

 Score =  237 bits (604), Expect = 3e-60
 Identities = 125/260 (48%), Positives = 168/260 (64%), Gaps = 1/260 (0%)
 Frame = +1

Query: 1   KEVPKALKLSANPAKMVMECFGKFYLQGRRAYTKDSPMVSGREASILVLEYFLLMENDGG 180
           +E+P ALKL+  PAK V++C GKFYLQGRRA+TK+SPMVS R+ S+L+LE FLLM + G 
Sbjct: 176 EEIPSALKLAKEPAKFVLDCIGKFYLQGRRAFTKESPMVSARQVSLLILESFLLMPDRGK 235

Query: 181 G-VEIGDEVKQEAYSAAVAWRKRLWSEGGLYRACDADARGLLLLISCYGIPPGFQIQDII 357
           G V+I   +K EA +AAVAWRKRL SEGGL  A   DARGLLLL++C+G+P  F+I D++
Sbjct: 236 GKVKIESCIKDEAETAAVAWRKRLMSEGGLAAAEKMDARGLLLLVACFGVPSNFRIMDLL 295

Query: 358 DLIRSCNINRISAALRCSPHLLAKIPEIIEQMLKNRREVEAVDIVYTFDFQDRYPPKTVL 537
           DLIR    N I+ AL+ SP L+  I  I+E  +K    +EA+++VYTF  +D++   +VL
Sbjct: 296 DLIRMSGSNEIAGALKRSPFLVPMISGIVESCIKRGMHIEALEMVYTFGMEDKFSASSVL 355

Query: 538 KSFLSKANEIAKRKRTEADDLSAVVIXXXXXXXXXXXXXXCWENHKIDPAKSFPDLNISE 717
            SFL  + E  +R + +A    A                 C E HK+DPAK  P   I E
Sbjct: 356 TSFLRMSKESFERTKRKAQSPLAFKEAAAKQLAALSSVMRCMETHKLDPAKELPGWQIKE 415

Query: 718 KISNLEKEITVLDKKVREDA 777
           +I NLEK+   LDK++ E A
Sbjct: 416 QIVNLEKDTLQLDKEMEEKA 435


>gb|AFJ66172.1| hypothetical protein 11M19.16 [Arabidopsis halleri]
          Length = 614

 Score =  236 bits (603), Expect = 4e-60
 Identities = 132/310 (42%), Positives = 180/310 (58%), Gaps = 3/310 (0%)
 Frame = +1

Query: 1    KEVPKALKLSANPAKMVMECFGKFYLQGRRAYTKDSPMVSGREASILVLEYFLLMENDGG 180
            +E+P ALKL+  PAK V+EC GKFYLQGRRA+TK+SPMVS R+ S+L+LE FLLM + G 
Sbjct: 176  EEIPSALKLAKEPAKFVLECIGKFYLQGRRAFTKESPMVSARQVSLLILESFLLMPDRGK 235

Query: 181  G-VEIGDEVKQEAYSAAVAWRKRLWSEGGLYRACDADARGLLLLISCYGIPPGFQIQDII 357
            G V+I   +K EA +AAVAWRKRL SEGGL  A   DARGLLLL++C+G+P   +  D++
Sbjct: 236  GKVKIESCIKDEAEAAAVAWRKRLMSEGGLAAAEKMDARGLLLLVACFGVPSNLRSMDLL 295

Query: 358  DLIRSCNINRISAALRCSPHLLAKIPEIIEQMLKNRREVEAVDIVYTFDFQDRYPPKTVL 537
            DLIR    N I+ AL+ SP L+  IP I+E  +K    +EA+++VYTF  +D++   +VL
Sbjct: 296  DLIRMSGSNEIAGALKRSPFLVPMIPGIVESSIKRGMHIEALEMVYTFGMEDKFSASSVL 355

Query: 538  KSFLSKANEIAKRKRTEADDLSAVVIXXXXXXXXXXXXXXCWENHKIDPAKSFPDLNISE 717
             SFL  + E  +R++ +A    A                 C E HK+DPAK  P   I E
Sbjct: 356  TSFLRMSKESFEREKRKAQSPLAFKEATAKQLAALSSVMQCMETHKLDPAKELPGWQIKE 415

Query: 718  KISNLEKEITVLDKKVREDAATXXXXXXXXXXXXXXXQDARRLHFPGHD--PILHNAVGQ 891
            +I NLEK+   LDK + E A +               Q  +R      +  P+  ++   
Sbjct: 416  QIVNLEKDTLQLDKGMEEKARSISLMEEAVLAKRMYNQQMKRPRLSPMEMPPVASSSYSP 475

Query: 892  AAERSSFPGH 921
                 SFP H
Sbjct: 476  IYLDRSFPSH 485


>gb|ABY51697.1| FRIGIDA [Arabidopsis lyrata subsp. petraea]
           gi|164371691|gb|ABY51719.1| FRIGIDA [Arabidopsis lyrata
           subsp. petraea]
          Length = 611

 Score =  236 bits (603), Expect = 4e-60
 Identities = 125/260 (48%), Positives = 167/260 (64%), Gaps = 1/260 (0%)
 Frame = +1

Query: 1   KEVPKALKLSANPAKMVMECFGKFYLQGRRAYTKDSPMVSGREASILVLEYFLLMENDG- 177
           +E+P ALKL+  PAK V+EC GKFYLQGRRA+TK+SPMVS R+ S+L+LE FLLM + G 
Sbjct: 173 EEIPSALKLAKEPAKFVLECIGKFYLQGRRAFTKESPMVSARQVSLLILESFLLMPDRGK 232

Query: 178 GGVEIGDEVKQEAYSAAVAWRKRLWSEGGLYRACDADARGLLLLISCYGIPPGFQIQDII 357
           G V+I   +K EA +AAVAWRKRL SEGGL  A   DARGLLLL++C+G+P  F+  D++
Sbjct: 233 GNVKIESCIKDEAETAAVAWRKRLMSEGGLAAAEKMDARGLLLLVACFGVPSNFRSMDLL 292

Query: 358 DLIRSCNINRISAALRCSPHLLAKIPEIIEQMLKNRREVEAVDIVYTFDFQDRYPPKTVL 537
           DLIR    N I+ AL+ SP L+  I  I+E  +K    +EA+++VYTF  +D++   +VL
Sbjct: 293 DLIRMSGSNEIAGALKRSPFLVPMISGIVESSIKRGMHIEALEMVYTFGMEDKFSASSVL 352

Query: 538 KSFLSKANEIAKRKRTEADDLSAVVIXXXXXXXXXXXXXXCWENHKIDPAKSFPDLNISE 717
            SFL  + E  +R + +A    A                 C E HK+DPAK  P   I E
Sbjct: 353 TSFLRMSKESFERTKRKAQSPLAFKEAAAKQLAVLSSVMRCMETHKLDPAKELPGWQIKE 412

Query: 718 KISNLEKEITVLDKKVREDA 777
           +I NLEK+   LDK++ E A
Sbjct: 413 QIVNLEKDTLQLDKEMEEKA 432


>gb|ABY51977.1| FRIGIDA [Arabidopsis lyrata subsp. lyrata]
          Length = 600

 Score =  236 bits (601), Expect = 7e-60
 Identities = 125/260 (48%), Positives = 167/260 (64%), Gaps = 1/260 (0%)
 Frame = +1

Query: 1   KEVPKALKLSANPAKMVMECFGKFYLQGRRAYTKDSPMVSGREASILVLEYFLLMENDGG 180
           +E+P ALKL+  PAK V+EC GKFYLQGRRA+TK+SPMVS R+ S+L+LE FLLM + G 
Sbjct: 176 EEIPSALKLAKEPAKFVLECIGKFYLQGRRAFTKESPMVSARQVSLLILESFLLMPDRGK 235

Query: 181 G-VEIGDEVKQEAYSAAVAWRKRLWSEGGLYRACDADARGLLLLISCYGIPPGFQIQDII 357
           G V+I   +K EA +AAVAWRKRL SEGGL  A   DARGLLLL++C+G+P  F+  D++
Sbjct: 236 GKVKIESCIKDEAETAAVAWRKRLMSEGGLAAAEKMDARGLLLLVACFGVPSNFRSMDLL 295

Query: 358 DLIRSCNINRISAALRCSPHLLAKIPEIIEQMLKNRREVEAVDIVYTFDFQDRYPPKTVL 537
           DLIR    N I+ AL+ SP L+  I  I+E  +K    +EA+++VYTF  +D++   +VL
Sbjct: 296 DLIRMSGSNEIAGALKRSPFLVPMISGIVESSIKRGMHIEALEMVYTFGMEDKFSASSVL 355

Query: 538 KSFLSKANEIAKRKRTEADDLSAVVIXXXXXXXXXXXXXXCWENHKIDPAKSFPDLNISE 717
            SFL  + E  +R + +A    A                 C E HK+DPAK  P   I E
Sbjct: 356 TSFLRMSKESFERTKRKAQSPLAFKEAAAKQLAALSSVMRCMETHKLDPAKELPGWQIKE 415

Query: 718 KISNLEKEITVLDKKVREDA 777
           +I NLEK+   LDK++ E A
Sbjct: 416 QIVNLEKDTLQLDKEMEEKA 435


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