BLASTX nr result

ID: Bupleurum21_contig00019174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019174
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17697.3| unnamed protein product [Vitis vinifera]              223   3e-56
ref|XP_002298590.1| predicted protein [Populus trichocarpa] gi|2...   221   9e-56
ref|XP_004145682.1| PREDICTED: uncharacterized protein LOC101219...   211   8e-53
tpg|DAA56286.1| TPA: hypothetical protein ZEAMMB73_851729 [Zea m...   206   4e-51
ref|XP_002456801.1| hypothetical protein SORBIDRAFT_03g043050 [S...   205   5e-51

>emb|CBI17697.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  223 bits (567), Expect = 3e-56
 Identities = 104/129 (80%), Positives = 118/129 (91%)
 Frame = -2

Query: 657 IHTIHTATGCPRLTKINLQAPKSVEVEYDNGSVYNLSAEFLRIYSPAADSKVRSIGGEKV 478
           + +IHT    PRLTK +L  PK+VEV++DNGS +NLSAEFLRI+SPAADSKVRSIGGEKV
Sbjct: 280 VRSIHTT---PRLTKFSLHPPKTVEVKFDNGSAFNLSAEFLRIHSPAADSKVRSIGGEKV 336

Query: 477 IYGRRHVGIMSGEPIGNYGVRLLFDDLHKTGIYTWDYLYHIGSNKFSLMRNYIKTLKKHG 298
           I+GRRHVGIMS EP+GNYGVR+LFDDLHKTGIYTWDY YH+GSNKF+LMRNYIKTLKKHG
Sbjct: 337 IFGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYTWDYFYHLGSNKFTLMRNYIKTLKKHG 396

Query: 297 LSRDPPRRK 271
           L+RDPPRRK
Sbjct: 397 LNRDPPRRK 405


>ref|XP_002298590.1| predicted protein [Populus trichocarpa] gi|222845848|gb|EEE83395.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  221 bits (563), Expect = 9e-56
 Identities = 102/129 (79%), Positives = 114/129 (88%)
 Frame = -2

Query: 657 IHTIHTATGCPRLTKINLQAPKSVEVEYDNGSVYNLSAEFLRIYSPAADSKVRSIGGEKV 478
           I  +HT+   PRLT+  LQAPK+VEVEY NGS +NLSAEFLRI SPA D KVRS+GGEKV
Sbjct: 8   IRRVHTSLDAPRLTRFTLQAPKNVEVEYANGSKFNLSAEFLRIQSPAVDGKVRSVGGEKV 67

Query: 477 IYGRRHVGIMSGEPIGNYGVRLLFDDLHKTGIYTWDYLYHIGSNKFSLMRNYIKTLKKHG 298
           I GRRHVGIMS EP+GNYGVR++FDDLHKTGIYTWD+ YH+GSNKF+LMRNYIKTLKKHG
Sbjct: 68  IVGRRHVGIMSAEPVGNYGVRMIFDDLHKTGIYTWDFFYHLGSNKFTLMRNYIKTLKKHG 127

Query: 297 LSRDPPRRK 271
           LSRDPPRRK
Sbjct: 128 LSRDPPRRK 136


>ref|XP_004145682.1| PREDICTED: uncharacterized protein LOC101219823 [Cucumis sativus]
          Length = 136

 Score =  211 bits (538), Expect = 8e-53
 Identities = 95/127 (74%), Positives = 114/127 (89%)
 Frame = -2

Query: 651 TIHTATGCPRLTKINLQAPKSVEVEYDNGSVYNLSAEFLRIYSPAADSKVRSIGGEKVIY 472
           TIHT    P++T   L APK VEV++ +GSV+NLSAEFLR+YSPAAD+K+RSIGGEKVI 
Sbjct: 10  TIHTTLDAPQITTFALHAPKYVEVKFADGSVFNLSAEFLRVYSPAADAKIRSIGGEKVIS 69

Query: 471 GRRHVGIMSGEPIGNYGVRLLFDDLHKTGIYTWDYLYHIGSNKFSLMRNYIKTLKKHGLS 292
           GRRHVGIMS EP+GNYGVR+LFDDLH+TGIY+WDY +H+GSNKF+L+RNY+KTLKKHGLS
Sbjct: 70  GRRHVGIMSAEPVGNYGVRILFDDLHRTGIYSWDYFFHLGSNKFTLLRNYVKTLKKHGLS 129

Query: 291 RDPPRRK 271
           RDPP+RK
Sbjct: 130 RDPPKRK 136


>tpg|DAA56286.1| TPA: hypothetical protein ZEAMMB73_851729 [Zea mays]
          Length = 138

 Score =  206 bits (523), Expect = 4e-51
 Identities = 96/130 (73%), Positives = 114/130 (87%), Gaps = 1/130 (0%)
 Frame = -2

Query: 657 IHTIHTATGCP-RLTKINLQAPKSVEVEYDNGSVYNLSAEFLRIYSPAADSKVRSIGGEK 481
           +  +HTA   P RLTK  L  PK VE+E+ +GS ++LSAEFLR+YSPAADSK+RS+GGEK
Sbjct: 9   LRRLHTAAAQPPRLTKFALHPPKFVEIEFADGSSFHLSAEFLRVYSPAADSKIRSVGGEK 68

Query: 480 VIYGRRHVGIMSGEPIGNYGVRLLFDDLHKTGIYTWDYLYHIGSNKFSLMRNYIKTLKKH 301
           VI+GRRHVGIMS E +GNYGVR+LFDDLHKTGI+TWDYL+H+GSNKFSLMRNYI+TL+KH
Sbjct: 69  VIFGRRHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKFSLMRNYIRTLRKH 128

Query: 300 GLSRDPPRRK 271
           GLSRDP RRK
Sbjct: 129 GLSRDPQRRK 138


>ref|XP_002456801.1| hypothetical protein SORBIDRAFT_03g043050 [Sorghum bicolor]
           gi|241928776|gb|EES01921.1| hypothetical protein
           SORBIDRAFT_03g043050 [Sorghum bicolor]
          Length = 138

 Score =  205 bits (522), Expect = 5e-51
 Identities = 95/130 (73%), Positives = 114/130 (87%), Gaps = 1/130 (0%)
 Frame = -2

Query: 657 IHTIHTATGCP-RLTKINLQAPKSVEVEYDNGSVYNLSAEFLRIYSPAADSKVRSIGGEK 481
           +  +HTA   P RLTK  L  PKSVE+E+ +GS ++LSAEFLR+YSPAADSK+RS+GGEK
Sbjct: 9   VRRLHTAAAQPPRLTKFALHPPKSVEIEFADGSSFHLSAEFLRVYSPAADSKIRSVGGEK 68

Query: 480 VIYGRRHVGIMSGEPIGNYGVRLLFDDLHKTGIYTWDYLYHIGSNKFSLMRNYIKTLKKH 301
           VI+GR+HVGIMS E +GNYGVR+LFDDLHKTGI+TWDYL+H+GSNKF LMRNYI+TL+KH
Sbjct: 69  VIFGRQHVGIMSAESVGNYGVRILFDDLHKTGIFTWDYLHHLGSNKFGLMRNYIRTLRKH 128

Query: 300 GLSRDPPRRK 271
           GLSRDP RRK
Sbjct: 129 GLSRDPQRRK 138


Top