BLASTX nr result

ID: Bupleurum21_contig00019161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019161
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90603.1| 40S ribosomal protein S5 [Solanum tuberosum]           292   2e-77
gb|AAR89617.1| 40S ribosomal protein S5 [Capsicum annuum]             292   2e-77
ref|XP_002281550.1| PREDICTED: 40S ribosomal protein S5 isoform ...   277   6e-73
ref|XP_002266736.1| PREDICTED: 40S ribosomal protein S5 isoform ...   277   7e-73
gb|AFK39266.1| unknown [Lotus japonicus]                              276   1e-72

>gb|AFW90603.1| 40S ribosomal protein S5 [Solanum tuberosum]
          Length = 219

 Score =  292 bits (747), Expect = 2e-77
 Identities = 143/156 (91%), Positives = 149/156 (95%)
 Frame = -3

Query: 469 LFNRWSYDDVSIGDLSVEDYITATAAKHPTYMPHTSGRYQARRFRKAQCPIVERMTNSLM 290
           LFNRWSYD V I D+SVEDYITATA KHP YMPHT+GRYQA+RFRKAQCPIVER+TNSLM
Sbjct: 33  LFNRWSYDGVEINDMSVEDYITATANKHPVYMPHTAGRYQAKRFRKAQCPIVERLTNSLM 92

Query: 289 MHGRNNGKKLMAVRIIKHAMEIIHLLTDANPIQIIVDAAINSGPREDATRIGSAGVVRRQ 110
           MHGRNNGKKLMAVRIIKHAMEIIHLLTD NPIQ+IVDA INSGPREDATRIGSAGVVRRQ
Sbjct: 93  MHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQ 152

Query: 109 AVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECL 2
           AVDISPLRRVNQAIYLLTTGARESAFRN+KTIAECL
Sbjct: 153 AVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECL 188


>gb|AAR89617.1| 40S ribosomal protein S5 [Capsicum annuum]
          Length = 212

 Score =  292 bits (747), Expect = 2e-77
 Identities = 143/156 (91%), Positives = 149/156 (95%)
 Frame = -3

Query: 469 LFNRWSYDDVSIGDLSVEDYITATAAKHPTYMPHTSGRYQARRFRKAQCPIVERMTNSLM 290
           LFNRWSYD V I D+SVEDYITATA KHP YMPHT+GRYQA+RFRKAQCPIVER+TNSLM
Sbjct: 26  LFNRWSYDGVDINDMSVEDYITATANKHPVYMPHTAGRYQAKRFRKAQCPIVERLTNSLM 85

Query: 289 MHGRNNGKKLMAVRIIKHAMEIIHLLTDANPIQIIVDAAINSGPREDATRIGSAGVVRRQ 110
           MHGRNNGKKLMAVRIIKHAMEIIHLLTD NPIQ+IVDA INSGPREDATRIGSAGVVRRQ
Sbjct: 86  MHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQ 145

Query: 109 AVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECL 2
           AVDISPLRRVNQAIYLLTTGARESAFRN+KTIAECL
Sbjct: 146 AVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECL 181


>ref|XP_002281550.1| PREDICTED: 40S ribosomal protein S5 isoform 2 [Vitis vinifera]
           gi|225441585|ref|XP_002281538.1| PREDICTED: 40S
           ribosomal protein S5 isoform 1 [Vitis vinifera]
           gi|297739774|emb|CBI29956.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score =  277 bits (709), Expect = 6e-73
 Identities = 133/156 (85%), Positives = 145/156 (92%)
 Frame = -3

Query: 469 LFNRWSYDDVSIGDLSVEDYITATAAKHPTYMPHTSGRYQARRFRKAQCPIVERMTNSLM 290
           LFNRWS+D+V I D+S+EDYI    AKH TY+PHT+GRY  +RFRKAQCPIVER+TNSLM
Sbjct: 22  LFNRWSFDEVQISDISLEDYIAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLM 81

Query: 289 MHGRNNGKKLMAVRIIKHAMEIIHLLTDANPIQIIVDAAINSGPREDATRIGSAGVVRRQ 110
           MHGRNNGKKLMAVRIIKHAMEIIHLLT+ NPIQ+IVDA INSGPREDATRIGSAGVVRRQ
Sbjct: 82  MHGRNNGKKLMAVRIIKHAMEIIHLLTEQNPIQVIVDAVINSGPREDATRIGSAGVVRRQ 141

Query: 109 AVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECL 2
           AVDISPLRR+NQAIYLLTTGARESAFRN+KTIAECL
Sbjct: 142 AVDISPLRRINQAIYLLTTGARESAFRNIKTIAECL 177


>ref|XP_002266736.1| PREDICTED: 40S ribosomal protein S5 isoform 1 [Vitis vinifera]
           gi|296085149|emb|CBI28644.3| unnamed protein product
           [Vitis vinifera]
          Length = 204

 Score =  277 bits (708), Expect = 7e-73
 Identities = 133/156 (85%), Positives = 145/156 (92%)
 Frame = -3

Query: 469 LFNRWSYDDVSIGDLSVEDYITATAAKHPTYMPHTSGRYQARRFRKAQCPIVERMTNSLM 290
           LFNRWS+D+V IGD+S+ DY+    AKH TY+PHT+GRY  +RFRKAQCPIVER+TNSLM
Sbjct: 18  LFNRWSFDEVQIGDMSLLDYVAVNPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLM 77

Query: 289 MHGRNNGKKLMAVRIIKHAMEIIHLLTDANPIQIIVDAAINSGPREDATRIGSAGVVRRQ 110
           MHGRNNGKKLMAVRI+KHAMEIIHLLTD NPIQ+IVDA INSGPREDATRIGSAGVVRRQ
Sbjct: 78  MHGRNNGKKLMAVRIMKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQ 137

Query: 109 AVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECL 2
           AVDISPLRRVNQAIYLLTTGARESAFRN+KTIAECL
Sbjct: 138 AVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECL 173


>gb|AFK39266.1| unknown [Lotus japonicus]
          Length = 204

 Score =  276 bits (707), Expect = 1e-72
 Identities = 131/156 (83%), Positives = 145/156 (92%)
 Frame = -3

Query: 469 LFNRWSYDDVSIGDLSVEDYITATAAKHPTYMPHTSGRYQARRFRKAQCPIVERMTNSLM 290
           LFNRWSYDDV + D+S+ DY+   A+KH TY+PHT+GRY  +RFRKAQCPI+ER+TNSLM
Sbjct: 18  LFNRWSYDDVQVTDISLADYVGVVASKHATYVPHTAGRYSVKRFRKAQCPIIERLTNSLM 77

Query: 289 MHGRNNGKKLMAVRIIKHAMEIIHLLTDANPIQIIVDAAINSGPREDATRIGSAGVVRRQ 110
           MHGRNNGKKLMAVRIIKHAMEIIHLLTD NP+Q+IVDA INSGPREDATRIGSAGVVRRQ
Sbjct: 78  MHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPVQVIVDAVINSGPREDATRIGSAGVVRRQ 137

Query: 109 AVDISPLRRVNQAIYLLTTGARESAFRNVKTIAECL 2
           AVDISPLRRVNQAIYLLTTGARE+AFRN+KTIAECL
Sbjct: 138 AVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECL 173


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