BLASTX nr result

ID: Bupleurum21_contig00019124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00019124
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284626.1| PREDICTED: uncharacterized protein LOC100262...    80   2e-13
ref|XP_002302217.1| predicted protein [Populus trichocarpa] gi|2...    58   8e-07
ref|XP_002520303.1| protein with unknown function [Ricinus commu...    55   7e-06

>ref|XP_002284626.1| PREDICTED: uncharacterized protein LOC100262507 [Vitis vinifera]
          Length = 2260

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 59/170 (34%), Positives = 82/170 (48%), Gaps = 5/170 (2%)
 Frame = -3

Query: 495  GANGSASWLRTTDKDENTNSSRSESKEGIANSVGRLITGGT-ATSEGPRTAPLPQINKSI 319
            G + S   L  +  DE    + SES+  + +   R  TG T A SE P+T PLP   K  
Sbjct: 1461 GLSSSVYRLNPSGVDEMRKRTGSESRTDVIDPSNRSSTGATDAPSERPQTPPLPYSTKLP 1520

Query: 318  DTTTIYAGDRTPSHQANTQSDSCPETLTLPQQTSNVDIPNSLEVDTKFSKPFDYLAGLNR 139
              TTI +GD T S   +   + C   +  P    N+ +P S E   K S   +   GL  
Sbjct: 1521 KCTTISSGDCTTSPLVDPLLNGCSGNM--PDPAENIKVPMSSEDGAKSSGSTENQTGLIN 1578

Query: 138  DLGSQRILDKRKSGEN----ITYVKRKSNQLIATRNVNEKSNWDVDKIQA 1
            +L SQ +L+   S  +    +TYVKRKSNQL+A  N ++ S  + DK  A
Sbjct: 1579 NLESQSVLNDGNSESSKLKRVTYVKRKSNQLVAASNPHDMSVQNADKTPA 1628


>ref|XP_002302217.1| predicted protein [Populus trichocarpa] gi|222843943|gb|EEE81490.1|
            predicted protein [Populus trichocarpa]
          Length = 2120

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 48/156 (30%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
 Frame = -3

Query: 489  NGSASWLRTTDKDENTNSSRSESKEGIANSVGRLITGGT-ATSEGPRTAPLPQINKSIDT 313
            + S   L ++  DE   S+ S+S+  +A+ +  L TGG  A+ E PRT  L  ++K  + 
Sbjct: 1416 SSSVYQLNSSGTDEPKKSAGSDSRIDLADPLNVLRTGGMDASFEKPRTPSLSSVSKISNR 1475

Query: 312  TTIYAGDRTPSHQANTQSDSCPETLTLPQQT-SNVDIPNSLEVDTKFS-KPFDYLAGLNR 139
             +   G R  S  A      C ET+T+P +   + D+P S +   K S  P    + ++ 
Sbjct: 1476 ASNSLGGRASSPLAEHLHSLCTETVTVPAKLLESNDVPKSSDDVLKISGSPITQNSQISN 1535

Query: 138  DLGSQRILDKRK----SGENITYVKRKSNQLIATRN 43
                    D       +G+++TYVKRKSNQL+A+ N
Sbjct: 1536 LECHSDTNDGNTVALANGKSLTYVKRKSNQLVASSN 1571


>ref|XP_002520303.1| protein with unknown function [Ricinus communis]
            gi|223540522|gb|EEF42089.1| protein with unknown function
            [Ricinus communis]
          Length = 2030

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
 Frame = -3

Query: 495  GANGSASWLRTTDKDENTNSSRSESKEGIANSVGRLITGGTATSEGPRTAPLPQINKSID 316
            G + SA WL ++ K E   ++  +++ G+A+    + +G  A+ E PRT PLP   K  +
Sbjct: 1326 GLSSSAYWLNSSGKYEVKKNT--DTRTGVADPPNFVKSGVGASFERPRTPPLPSSTKISN 1383

Query: 315  TTTIYAGDRTPSHQANTQSDSCPETLTLP-QQTSNVDIPNSLEVDTKFSKPFDYLAGLNR 139
              T   GD   S           E  + P   T + D+  S E   K S+   +  G   
Sbjct: 1384 HPTNSMGDCLSSPLVERLHICAAEAASDPVTSTESNDVLKSSEDTVKVSEKHMFQTGQIN 1443

Query: 138  DLGSQRILDK----RKSGENITYVKRKSNQLIATRN 43
            +L  +   +       + ++I YVKRKSNQLIAT N
Sbjct: 1444 NLDCETEQNDGNAVSSNAKSIKYVKRKSNQLIATSN 1479


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